RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 L1TD1Q5T7N2 865 aaKnown RBP4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 CREB3L3Q68CJ9 461 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 CC2D1AQ6P1N0 951 aaPredicted RBP4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 CYP2R1Q6VVX0 501 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 MMS22LQ6ZRQ5 1243 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 KIAA1211Q6ZU35 1233 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 ACAD11Q709F0 780 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 KRT78Q8N1N4 520 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 DTWD2Q8NBA8 298 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 RCBTB1Q8NDN9 531 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 UBASH3BQ8TF42 649 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 RAX2Q96IS3 184 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 ZC3H10Q96K80 434 aaKnown RBP4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 CCDC138Q96M89 665 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 FCRL3Q96P31 734 aaPredicted RBP4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 PAGR1Q9BTK6 254 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 ISCA1Q9BUE6 129 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 GPR62Q9BZJ7 368 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 TRIT1Q9H3H1 467 aaKnown RBP4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 GPRC5CQ9NQ84 441 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 ZNF277Q9NRM2 450 aaPredicted RBP4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 FAM105AQ9NUU6 356 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 KCNK4Q9NYG8 393 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 FAM50BQ9Y247 325 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 LRCH1Q9Y2L9 728 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 PCDHGA9Q9Y5G4 932 aaKnown RBP4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 PCDHGA8Q9Y5G5 932 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 PCDHGA7Q9Y5G6 932 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 PCDHGA6Q9Y5G7 932 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 PCDHGA3Q9Y5H0 932 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 PCDHGA2Q9Y5H1 932 aa4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 TIMM13Q9Y5L4 95 aaPredicted RBP4.65□□□□□ -1.67
RNU4-78P-201ENST00000410940 PRRT4C9JH25 899 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 F5H423 210 aaPredicted RBP4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 STXBP3O00186 592 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 SART1O43290 800 aaKnown RBP4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 VAV1P15498 845 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 SPINK2P20155 84 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 AGXTP21549 392 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 SERPINB3P29508 390 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 SLC16A1P53985 500 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 RPL11P62913 178 aaKnown RBP4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 MRPS9P82933 396 aaKnown RBP4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 HTRA3P83110 453 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 IRF9Q00978 393 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 DGKKQ5KSL6 1271 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 NKAPQ8N5F7 415 aaKnown RBP4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 POU5F2Q8N7G0 328 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 KIAA1958Q8N8K9 716 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 LINC00116Q8NCU8 138 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 DEPTORQ8TB45 409 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 DIS3LQ8TF46 1054 aaKnown RBP4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 RSAD2Q8WXG1 361 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 EZH1Q92800 747 aaPredicted RBP4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 CDC5LQ99459 802 aaKnown RBP4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 NAA15Q9BXJ9 866 aaKnown RBP4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 IPPKQ9H8X2 491 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 PRDM5Q9NQX1 630 aaPredicted RBP4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 TOPORSQ9NS56 1045 aaPredicted RBP4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 MAP3K20Q9NYL2 800 aaKnown RBP4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 DDX20Q9UHI6 824 aaKnown RBP4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 PADI4Q9UM07 663 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 DNM3Q9UQ16 869 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 GPR45Q9Y5Y3 372 aa4.64□□□□□ -1.67
RNU4-78P-201ENST00000410940 ZNF561-AS1K7EIQ3 104 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 IGF2BP3O00425 579 aaKnown RBP eCLIP4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 EXOC5O00471 708 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 GSC2O15499 205 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 MAFKO60675 156 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 MSCO60682 206 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 TUSC2O75896 110 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 ZRANB2O95218 330 aaKnown RBP eCLIP4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 IGLV1-40P01703 118 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 RPLP2P05387 115 aaKnown RBP4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 ZBTB48P10074 688 aaPredicted RBP4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 ENPP1P22413 925 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 FNTBP49356 437 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 PCBP3P57721 371 aaKnown RBP4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 TBX2Q13207 712 aaPredicted RBP4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 SEMA5AQ13591 1074 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 GALEQ14376 348 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 PUM3Q15397 648 aaKnown RBP4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 ELF2Q15723 593 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 UVSSAQ2YD98 709 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 ANO4Q32M45 955 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 FBLN7Q53RD9 439 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 LCE5AQ5TCM9 118 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 CCDC174Q6PII3 467 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 CCDC149Q6ZUS6 474 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 USP45Q70EL2 814 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 TMC3Q7Z5M5 1100 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 UBE3DQ7Z6J8 389 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 DENND1CQ8IV53 801 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 CCDC103Q8IW40 242 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 PPHLN1Q8NEY8 458 aaKnown RBP4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 JADE3Q92613 823 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 TMEM169Q96HH4 297 aa4.63□□□□□ -1.67
RNU4-78P-201ENST00000410940 SLC12A9Q9BXP2 914 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms