RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 CEP112Q8N8E3 955 aa15□□□□□ -0.01
LIMS1-205ENST00000410093 KCTD10Q9H3F6 313 aa15□□□□□ -0.01
LIMS1-205ENST00000410093 MRPL44Q9H9J2 332 aaKnown RBP15□□□□□ -0.01
LIMS1-205ENST00000410093 AS3MTQ9HBK9 375 aa15□□□□□ -0.01
LIMS1-205ENST00000410093 METTL14Q9HCE5 456 aaKnown RBP15□□□□□ -0.01
LIMS1-205ENST00000410093 ARGLU1Q9NWB6 273 aaPredicted RBP15□□□□□ -0.01
LIMS1-205ENST00000410093 SIK3Q9Y2K2 1263 aa15□□□□□ -0.01
LIMS1-205ENST00000410093 TLL2Q9Y6L7 1015 aa15□□□□□ -0.01
LIMS1-205ENST00000410093 POTEFA5A3E0 1075 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 GAS7O60861 476 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 TUBBP07437 444 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 KNOP1Q1ED39 458 aaKnown RBP14.99□□□□□ -0.01
LIMS1-205ENST00000410093 CCDC40Q4G0X9 1142 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 XRRA1Q6P2D8 792 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 CCDC174Q6PII3 467 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 POTEGQ6S5H5 508 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 POTEEQ6S8J3 1075 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 MIGA2Q7L4E1 593 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 EPM2AIP1Q7L775 607 aaPredicted RBP14.99□□□□□ -0.01
LIMS1-205ENST00000410093 FRMD5Q7Z6J6 570 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 C2orf69Q8N8R5 385 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 NEK11Q8NG66 645 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 TEPSINQ96N21 525 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 WDR18Q9BV38 432 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 TEKT3Q9BXF9 490 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 ZNF341Q9BYN7 854 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 CCPG1Q9ULG6 757 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 ODF2LQ9ULJ1 636 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 RPTORQ8N122 1335 aa14.99□□□□□ -0.01
LIMS1-205ENST00000410093 POTEB2H3BUK9 544 aa14.98□□□□□ -0.01
LIMS1-205ENST00000410093 SLC16A3O15427 465 aaKnown RBP14.98□□□□□ -0.01
LIMS1-205ENST00000410093 STAT3P40763 770 aa14.98□□□□□ -0.01
LIMS1-205ENST00000410093 SPA17Q15506 151 aa14.98□□□□□ -0.01
LIMS1-205ENST00000410093 ANGEL2Q5VTE6 544 aaKnown RBP14.98□□□□□ -0.01
LIMS1-205ENST00000410093 WDR59Q6PJI9 974 aa14.98□□□□□ -0.01
LIMS1-205ENST00000410093 APOBEC3FQ8IUX4 373 aaKnown RBP14.98□□□□□ -0.01
LIMS1-205ENST00000410093 TRIM59Q8IWR1 403 aa14.98□□□□□ -0.01
LIMS1-205ENST00000410093 SCFD1Q8WVM8 642 aa14.98□□□□□ -0.01
LIMS1-205ENST00000410093 HPS3Q969F9 1004 aa14.98□□□□□ -0.01
LIMS1-205ENST00000410093 WDR24Q96S15 920 aa14.98□□□□□ -0.01
LIMS1-205ENST00000410093 NAPGQ99747 312 aaPredicted RBP14.98□□□□□ -0.01
LIMS1-205ENST00000410093 MXRA8Q9BRK3 442 aa14.98□□□□□ -0.01
LIMS1-205ENST00000410093 BEGAINQ9BUH8 593 aa14.98□□□□□ -0.01
LIMS1-205ENST00000410093 LUC7LQ9NQ29 371 aaKnown RBP14.98□□□□□ -0.01
LIMS1-205ENST00000410093 LZTFL1Q9NQ48 299 aa14.98□□□□□ -0.01
LIMS1-205ENST00000410093 CDC23Q9UJX2 597 aa14.98□□□□□ -0.01
LIMS1-205ENST00000410093 DAAM1Q9Y4D1 1078 aa14.98□□□□□ -0.01
LIMS1-205ENST00000410093 PPP2R3BQ9Y5P8 575 aa14.98□□□□□ -0.01
LIMS1-205ENST00000410093 FRMPD4Q14CM0 1322 aa14.98□□□□□ -0.01
LIMS1-205ENST00000410093 TRPM7Q96QT4 1865 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 RNF225M0QZC1 329 aaPredicted RBP14.97□□□□□ -0.01
LIMS1-205ENST00000410093 ZBED4O75132 1171 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 LCA5LO95447 670 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 MAP2K1Q02750 393 aaPredicted RBP14.97□□□□□ -0.01
LIMS1-205ENST00000410093 WHAMMP3Q1A5X7 153 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 SAPCD2Q86UD0 394 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 GPR161Q8N6U8 529 aaKnown RBP14.97□□□□□ -0.01
LIMS1-205ENST00000410093 GOLGA5Q8TBA6 731 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 CAPNS2Q96L46 248 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 CCDC42Q96M95 316 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 REEP2Q9BRK0 252 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 ZNF577Q9BSK1 485 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 TIPINQ9BVW5 301 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 SLC38A10Q9HBR0 1119 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 TYW1Q9NV66 732 aaKnown RBP14.97□□□□□ -0.01
LIMS1-205ENST00000410093 CEP72Q9P209 647 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.97□□□□□ -0.01
LIMS1-205ENST00000410093 SMCHD1A6NHR9 2005 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 PCNTO95613 3336 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 SSU72P8A0A1W2PR75 194 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 ADM5C9JUS6 153 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 USO1O60763 962 aaKnown RBP14.97□□□□□ -0.01
LIMS1-205ENST00000410093 TADA3O75528 432 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 SLITRK3O94933 977 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 OAZ1P54368 228 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 PABPC4Q13310 644 aaKnown RBP eCLIP14.97□□□□□ -0.01
LIMS1-205ENST00000410093 ADAM9Q13443 819 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 ALCAMQ13740 583 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 GLIPR1L2Q4G1C9 344 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 ZNF569Q5MCW4 686 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 PCNX4Q63HM2 1172 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 CYP4F22Q6NT55 531 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 B3GNT9Q6UX72 402 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 FMNL3Q8IVF7 1028 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 RABGGTAQ92696 567 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 GJA10Q969M2 543 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 CHP1Q99653 195 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 BHMT2Q9H2M3 363 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 NHEJ1Q9H9Q4 299 aaPredicted RBP14.97□□□□□ -0.01
LIMS1-205ENST00000410093 TBC1D22BQ9NU19 505 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 ZNF112Q9UJU3 913 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 MYO6Q9UM54 1294 aa14.97□□□□□ -0.01
LIMS1-205ENST00000410093 CTDP1Q9Y5B0 961 aaPredicted RBP14.97□□□□□ -0.01
LIMS1-205ENST00000410093 PARP14Q460N5 1801 aa14.96□□□□□ -0.01
LIMS1-205ENST00000410093 IPO5O00410 1097 aaKnown RBP14.96□□□□□ -0.02
LIMS1-205ENST00000410093 PPP1R12BO60237 982 aaPredicted RBP14.96□□□□□ -0.02
LIMS1-205ENST00000410093 MAPTP10636 758 aaKnown RBP14.96□□□□□ -0.02
LIMS1-205ENST00000410093 ARHGAP25P42331 645 aa14.96□□□□□ -0.02
LIMS1-205ENST00000410093 HUNKP57058 714 aa14.96□□□□□ -0.02
LIMS1-205ENST00000410093 MAPK8IP2Q13387 824 aaPredicted RBP14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms