RNA–Protein interactions for RNA: ENST00000410020.7

DYSF-208, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-208ENST00000410020 NR1H3Q13133 447 aa13.77□□□□□ -0.21
DYSF-208ENST00000410020 BYSLQ13895 437 aaKnown RBP13.77□□□□□ -0.21
DYSF-208ENST00000410020 CAPRIN2Q6IMN6 1127 aaKnown RBP13.77□□□□□ -0.21
DYSF-208ENST00000410020 GSG1L2A8MUP6 293 aa13.77□□□□□ -0.21
DYSF-208ENST00000410020 ECM2O94769 699 aaPredicted RBP13.77□□□□□ -0.21
DYSF-208ENST00000410020 TXNRD1Q16881 649 aa13.77□□□□□ -0.21
DYSF-208ENST00000410020 TMED8Q6PL24 325 aaPredicted RBP13.77□□□□□ -0.21
DYSF-208ENST00000410020 SPARCL1Q14515 664 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 GEN1Q17RS7 908 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 PPP1R2P3Q6NXS1 205 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 NOC2LQ9Y3T9 749 aaKnown RBP13.76□□□□□ -0.21
DYSF-208ENST00000410020 ESRRAP11474 423 aaPredicted RBP13.76□□□□□ -0.21
DYSF-208ENST00000410020 USP17L2Q6R6M4 530 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 SLC17A8Q8NDX2 589 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 TTC16Q8NEE8 873 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 GABPB2Q8TAK5 448 aaPredicted RBP13.76□□□□□ -0.21
DYSF-208ENST00000410020 CALR3Q96L12 384 aaKnown RBP13.76□□□□□ -0.21
DYSF-208ENST00000410020 CCDC17Q96LX7 622 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 UBE2TQ9NPD8 197 aaPredicted RBP13.76□□□□□ -0.21
DYSF-208ENST00000410020 BATF3Q9NR55 127 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 TRPC6Q9Y210 931 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 MT-ND3P03897 115 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 CHRNA3P32297 505 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 KCNH2Q12809 1159 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 XKR9Q5GH70 373 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 CDAN1Q8IWY9 1227 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 RAD54LQ92698 747 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 DDX17Q92841 729 aaKnown RBP13.76□□□□□ -0.21
DYSF-208ENST00000410020 FAM81BQ96LP2 452 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 YIPF3Q9GZM5 350 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 TRIM10Q9UDY6 481 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 FAF1Q9UNN5 650 aaPredicted RBP13.76□□□□□ -0.21
DYSF-208ENST00000410020 USP17L8P0C7I0 530 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 HNRNPH1P31943 449 aaKnown RBP13.76□□□□□ -0.21
DYSF-208ENST00000410020 SLC8A3P57103 927 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 LLGL1Q15334 1064 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 TRIP13Q15645 432 aaPredicted RBP13.76□□□□□ -0.21
DYSF-208ENST00000410020 ARMC2Q8NEN0 867 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 GSDMBQ8TAX9 411 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 TEKT1Q969V4 418 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 PICK1Q9NRD5 415 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 MRPL11Q9Y3B7 192 aaKnown RBP13.76□□□□□ -0.21
DYSF-208ENST00000410020 H3BQF6 201 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 CHGBP05060 677 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 MXI1P50539 228 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 GTF2IP78347 998 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 USP49Q70CQ1 688 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 HAUS1Q96CS2 278 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 DDX27Q96GQ7 796 aaKnown RBP13.76□□□□□ -0.21
DYSF-208ENST00000410020 TMEM206Q9H813 350 aa13.76□□□□□ -0.21
DYSF-208ENST00000410020 HDLBPQ00341 1268 aaKnown RBP13.75□□□□□ -0.21
DYSF-208ENST00000410020 ICA1Q05084 483 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 TCP10Q12799 353 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 ZYXQ15942 572 aaKnown RBP13.75□□□□□ -0.21
DYSF-208ENST00000410020 NSMFQ6X4W1 530 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 LIG4P49917 911 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 ARHGAP4P98171 946 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 FOXO4P98177 505 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 LRRC23Q53EV4 343 aaPredicted RBP13.75□□□□□ -0.21
DYSF-208ENST00000410020 ANKRD40Q6AI12 368 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 FAM47EQ6ZV65 393 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 DYNLL2Q96FJ2 89 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 TMOD4Q9NZQ9 345 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 PACSIN2Q9UNF0 486 aaPredicted RBP13.75□□□□□ -0.21
DYSF-208ENST00000410020 PP2D1A8MPX8 630 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 PRPF6O94906 941 aaKnown RBP13.75□□□□□ -0.21
DYSF-208ENST00000410020 TTLL1O95922 423 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 FAM107AO95990 144 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 NLRX1Q86UT6 975 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 IGDCC4Q8TDY8 1250 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 SPDL1Q96EA4 605 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 ACCSQ96QU6 501 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 CCSER1Q9C0I3 900 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 ETNK1Q9HBU6 452 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 DNAJC12Q9UKB3 198 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 SGK1O00141 431 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 SCARF1Q14162 830 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 NACC1Q96RE7 527 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 TMEM60Q9H2L4 133 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 PARVGQ9HBI0 331 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 MRPL47Q9HD33 250 aaKnown RBP13.75□□□□□ -0.21
DYSF-208ENST00000410020 USP17L3A6NCW0 530 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 USP17L4A6NCW7 530 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 USP17L1Q7RTZ2 530 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 CPXCR1Q8N123 301 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 TAB3Q8N5C8 712 aaPredicted RBP13.75□□□□□ -0.21
DYSF-208ENST00000410020 HAUS2Q9NVX0 235 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 CDHR2Q9BYE9 1310 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 H0Y3Z8 333 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 DAPK3O43293 454 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 RFC1P35251 1148 aaPredicted RBP13.75□□□□□ -0.21
DYSF-208ENST00000410020 CAV1Q03135 178 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 MKRN3Q13064 507 aaKnown RBP13.75□□□□□ -0.21
DYSF-208ENST00000410020 DEPTORQ8TB45 409 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 TRIM9Q9C026 710 aa13.75□□□□□ -0.21
DYSF-208ENST00000410020 PNPLA7Q6ZV29 1317 aa13.74□□□□□ -0.21
DYSF-208ENST00000410020 POTEMA6NI47 508 aa13.74□□□□□ -0.21
DYSF-208ENST00000410020 RNF8O76064 485 aa13.74□□□□□ -0.21
DYSF-208ENST00000410020 RHOBTB3O94955 611 aa13.74□□□□□ -0.21
DYSF-208ENST00000410020 PHF20Q9BVI0 1012 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms