RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 CNTNAP3Q9BZ76 1288 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 TM6SF1Q9BZW5 370 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 FAM107BQ9H098 131 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 AJAP1Q9UKB5 411 aaPredicted RBP3.5□□□□□ -1.85
RGPD3-202ENST00000409886 NFS1Q9Y697 457 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 KIAA1671Q9BY89 1806 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 E7EWF7 191 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 PRKAB2O43741 272 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 IGHA2P01877 340 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 LINGO3P0C6S8 592 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 SCNN1BP51168 640 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 DUS1LQ6P1R4 473 aaKnown RBP3.5□□□□□ -1.85
RGPD3-202ENST00000409886 TTLL7Q6ZT98 887 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 ADGRA1Q86SQ6 560 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 GJD3Q8N144 294 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 IFT43Q96FT9 208 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 YIPF2Q9BWQ6 316 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 API5Q9BZZ5 524 aaKnown RBP3.5□□□□□ -1.85
RGPD3-202ENST00000409886 TTYH3Q9C0H2 523 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 DEFB129Q9H1M3 183 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 ZNHIT6Q9NWK9 470 aaKnown RBP3.5□□□□□ -1.85
RGPD3-202ENST00000409886 ARHGAP20Q9P2F6 1191 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 POLLQ9UGP5 575 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 GGA1Q9UJY5 639 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 UNC13CQ8NB66 2214 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 ZNF407Q9C0G0 2248 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 SETD2Q9BYW2 2564 aaPredicted RBP3.5□□□□□ -1.85
RGPD3-202ENST00000409886 CABIN1Q9Y6J0 2220 aa3.5□□□□□ -1.85
RGPD3-202ENST00000409886 EFCAB8A8MWE9 144 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 M0R2C6 588 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 GTPBP6O43824 516 aaPredicted RBP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 RPS6KA5O75582 802 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 SMC2O95347 1197 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 CHRNB2P17787 502 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 CTDSPL2Q05D32 466 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 TFCP2Q12800 502 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 MKRN3Q13064 507 aaKnown RBP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 BIRC2Q13490 618 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 RBM26Q5T8P6 1007 aaKnown RBP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 SUSD4Q5VX71 490 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 CDCA2Q69YH5 1023 aaPredicted RBP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 DPY19L2P1Q6NXN4 242 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 CCDC13Q8IYE1 715 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 LPAR1Q92633 364 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 ERLEC1Q96DZ1 483 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 ZIM3Q96PE6 472 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 C12orf65Q9H3J6 166 aaKnown RBP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 DLL3Q9NYJ7 618 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 DONSONQ9NYP3 566 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 CALCOCO1Q9P1Z2 691 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 MORF4L1Q9UBU8 362 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 SNCAIPQ9Y6H5 919 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 UTYO14607 1347 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 POLR2DO15514 142 aaKnown RBP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 PRDM1O75626 825 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 SFPQP23246 707 aaKnown RBP eCLIP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 UBASH3AP57075 661 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 CFAP100Q494V2 611 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 PLEKHG4Q58EX7 1191 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 NFRKBQ6P4R8 1299 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 BLOC1S2Q6QNY1 142 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 UBE3BQ7Z3V4 1068 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 CCNJLQ8IV13 435 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 NUDT12Q9BQG2 462 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 PACSIN1Q9BY11 444 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 ZC3H12CQ9C0D7 883 aaKnown RBP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 MLXIPQ9HAP2 919 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 ARFGAP3Q9NP61 516 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 PNMA3Q9UL41 463 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 GABRQQ9UN88 632 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 TTC28Q96AY4 2481 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 KMT2BQ9UMN6 2715 aaPredicted RBP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 PLXNA4Q9HCM2 1894 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 AOX1Q06278 1338 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 IFIT3O14879 490 aaKnown RBP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 FLT3LGP49771 235 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 FUT2Q10981 343 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 IFT88Q13099 833 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 SPDYE2Q495Y8 402 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 C9orf50Q5SZB4 431 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 C1QTNF12Q5T7M4 302 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 DCAF15Q66K64 600 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 KBTBD2Q8IY47 623 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 CTCFLQ8NI51 663 aaPredicted RBP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 CCDC12Q8WUD4 166 aaPredicted RBP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 USP6NLQ92738 828 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 SDF4Q9BRK5 362 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 DBNDD1Q9H9R9 158 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 RBM28Q9NW13 759 aaKnown RBP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 PIKFYVEQ9Y2I7 2098 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 PARP14Q460N5 1801 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 PDHXO00330 501 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 ACTN4O43707 911 aaKnown RBP3.49□□□□□ -1.85
RGPD3-202ENST00000409886 MTM1Q13496 603 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 ADGRE1Q14246 886 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 CCDC102BQ68D86 513 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 LHX8Q68G74 356 aa3.49□□□□□ -1.85
RGPD3-202ENST00000409886 GPAT2Q6NUI2 795 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms