RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 LPXNO60711 386 aa16.82■□□□□ 0.28
CBX3-203ENST00000409747 CDC27P30260 824 aa16.82■□□□□ 0.28
CBX3-203ENST00000409747 HSPA4P34932 840 aa16.82■□□□□ 0.28
CBX3-203ENST00000409747 PFKFB3Q16875 520 aaPredicted RBP16.82■□□□□ 0.28
CBX3-203ENST00000409747 YME1L1Q96TA2 773 aa16.82■□□□□ 0.28
CBX3-203ENST00000409747 FAM217BQ9NTX9 383 aaPredicted RBP16.82■□□□□ 0.28
CBX3-203ENST00000409747 NID2Q14112 1375 aa16.82■□□□□ 0.28
CBX3-203ENST00000409747 SCG2P13521 617 aa16.82■□□□□ 0.28
CBX3-203ENST00000409747 ZNF76P36508 570 aa16.82■□□□□ 0.28
CBX3-203ENST00000409747 CLK2P49760 499 aaKnown RBP16.82■□□□□ 0.28
CBX3-203ENST00000409747 RUFY4Q6ZNE9 571 aa16.82■□□□□ 0.28
CBX3-203ENST00000409747 Q6ZUG5 572 aa16.82■□□□□ 0.28
CBX3-203ENST00000409747 NIPA1Q7RTP0 329 aa16.82■□□□□ 0.28
CBX3-203ENST00000409747 SPRED2Q7Z698 418 aa16.82■□□□□ 0.28
CBX3-203ENST00000409747 SP7Q8TDD2 431 aaPredicted RBP16.82■□□□□ 0.28
CBX3-203ENST00000409747 TOP1MTQ969P6 601 aa16.82■□□□□ 0.28
CBX3-203ENST00000409747 PGBD1Q96JS3 809 aa16.82■□□□□ 0.28
CBX3-203ENST00000409747 UHRF1Q96T88 793 aaPredicted RBP16.82■□□□□ 0.28
CBX3-203ENST00000409747 SUGCTQ9HAC7 445 aa16.82■□□□□ 0.28
CBX3-203ENST00000409747 ESYT2A0FGR8 921 aa16.81■□□□□ 0.28
CBX3-203ENST00000409747 CHRNA1P02708 482 aa16.81■□□□□ 0.28
CBX3-203ENST00000409747 PSMA5P28066 241 aa16.81■□□□□ 0.28
CBX3-203ENST00000409747 SLC26A2P50443 739 aa16.81■□□□□ 0.28
CBX3-203ENST00000409747 ACTR2P61160 394 aa16.81■□□□□ 0.28
CBX3-203ENST00000409747 KRT40Q6A162 431 aa16.81■□□□□ 0.28
CBX3-203ENST00000409747 PLPPR4Q7Z2D5 763 aa16.81■□□□□ 0.28
CBX3-203ENST00000409747 FBXL16Q8N461 479 aa16.81■□□□□ 0.28
CBX3-203ENST00000409747 BRF1Q92994 677 aa16.81■□□□□ 0.28
CBX3-203ENST00000409747 AGO4Q9HCK5 861 aaKnown RBP16.81■□□□□ 0.28
CBX3-203ENST00000409747 TRPC6Q9Y210 931 aa16.81■□□□□ 0.28
CBX3-203ENST00000409747 SNX14Q9Y5W7 946 aa16.81■□□□□ 0.28
CBX3-203ENST00000409747 MEIS1O00470 390 aa16.8■□□□□ 0.28
CBX3-203ENST00000409747 ADD1P35611 737 aaKnown RBP16.8■□□□□ 0.28
CBX3-203ENST00000409747 IGBP1P78318 339 aa16.8■□□□□ 0.28
CBX3-203ENST00000409747 AKAP17AQ02040 695 aaKnown RBP16.8■□□□□ 0.28
CBX3-203ENST00000409747 MGAT3Q09327 533 aa16.8■□□□□ 0.28
CBX3-203ENST00000409747 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
CBX3-203ENST00000409747 FBXO22Q8NEZ5 403 aa16.8■□□□□ 0.28
CBX3-203ENST00000409747 CYP2W1Q8TAV3 490 aa16.8■□□□□ 0.28
CBX3-203ENST00000409747 HLA-CQ95604 372 aa16.8■□□□□ 0.28
CBX3-203ENST00000409747 C6orf50Q9HD87 102 aa16.8■□□□□ 0.28
CBX3-203ENST00000409747 TMEM260Q9NX78 707 aa16.8■□□□□ 0.28
CBX3-203ENST00000409747 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.79■□□□□ 0.28
CBX3-203ENST00000409747 M0QZ92 97 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 ARP10275 920 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 GHRP10912 638 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 INSRRP14616 1297 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 RPS6KB1P23443 525 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 STAT5BP51692 787 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 TFF2Q03403 129 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 MARCH8Q5T0T0 291 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 IER5Q5VY09 327 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 DNAJB3Q8WWF6 145 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 PCYT2Q99447 389 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 UPP2O95045 317 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 CPA1P15085 419 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 GNA11P29992 359 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 MRPS6P82932 125 aaKnown RBP16.79■□□□□ 0.28
CBX3-203ENST00000409747 SETQ01105 290 aaPredicted RBP16.79■□□□□ 0.28
CBX3-203ENST00000409747 ITGB3BPQ13352 177 aaPredicted RBP16.79■□□□□ 0.28
CBX3-203ENST00000409747 TSHZ1Q6ZSZ6 1077 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 REXO1Q8N1G1 1221 aaKnown RBP16.79■□□□□ 0.28
CBX3-203ENST00000409747 C17orf80Q9BSJ5 609 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 OSBPL7Q9BZF2 842 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 ZMYND12Q9H0C1 365 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 CDY2AQ9Y6F7 541 aa16.79■□□□□ 0.28
CBX3-203ENST00000409747 PRPF3O43395 683 aaKnown RBP16.78■□□□□ 0.28
CBX3-203ENST00000409747 EPB41L2O43491 1005 aaKnown RBP16.78■□□□□ 0.28
CBX3-203ENST00000409747 ATG7O95352 703 aa16.78■□□□□ 0.28
CBX3-203ENST00000409747 CYP3A4P08684 503 aa16.78■□□□□ 0.28
CBX3-203ENST00000409747 LPIN1Q14693 890 aa16.78■□□□□ 0.28
CBX3-203ENST00000409747 PLCB4Q15147 1175 aa16.78■□□□□ 0.28
CBX3-203ENST00000409747 PTPROQ16827 1216 aa16.78■□□□□ 0.28
CBX3-203ENST00000409747 FBXO47Q5MNV8 452 aa16.78■□□□□ 0.28
CBX3-203ENST00000409747 JAKMIP3Q5VZ66 844 aa16.78■□□□□ 0.28
CBX3-203ENST00000409747 FAM160B1Q5W0V3 765 aa16.78■□□□□ 0.28
CBX3-203ENST00000409747 CCDC148Q8NFR7 591 aa16.78■□□□□ 0.28
CBX3-203ENST00000409747 BICD2Q8TD16 824 aa16.78■□□□□ 0.28
CBX3-203ENST00000409747 AGXT2Q9BYV1 514 aa16.78■□□□□ 0.28
CBX3-203ENST00000409747 TCEAL9Q9UHQ7 104 aa16.78■□□□□ 0.28
CBX3-203ENST00000409747 PCDHA2Q9Y5H9 948 aa16.78■□□□□ 0.28
CBX3-203ENST00000409747 SQORQ9Y6N5 450 aa16.78■□□□□ 0.28
CBX3-203ENST00000409747 RALGAPA2Q2PPJ7 1873 aa16.77■□□□□ 0.28
CBX3-203ENST00000409747 POTEB3A0JP26 581 aa16.77■□□□□ 0.28
CBX3-203ENST00000409747 BMP1P13497 986 aa16.77■□□□□ 0.28
CBX3-203ENST00000409747 EPC2Q52LR7 807 aa16.77■□□□□ 0.28
CBX3-203ENST00000409747 POTEBQ6S5H4 581 aa16.77■□□□□ 0.28
CBX3-203ENST00000409747 PLA2G4DQ86XP0 818 aa16.77■□□□□ 0.28
CBX3-203ENST00000409747 RNF26Q9BY78 433 aaPredicted RBP16.77■□□□□ 0.28
CBX3-203ENST00000409747 FAM49AQ9H0Q0 323 aaPredicted RBP16.77■□□□□ 0.28
CBX3-203ENST00000409747 BACH1O14867 736 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 CRYGNQ8WXF5 182 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 IL17RAQ96F46 866 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 FTHL17Q9BXU8 183 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 RWDD3Q9Y3V2 267 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 TRPV2Q9Y5S1 764 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 NLRC5Q86WI3 1866 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 IGKV6D-21A0A0A0MT36 114 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 SMIM35A0A1B0GVV1 85 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 FAM86B1E9PN63 330 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms