RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 POU5F1BQ06416 359 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 GLE1Q53GS7 698 aaKnown RBP9.07□□□□□ -0.96
SCN9A-203ENST00000409672 RTKN2Q8IZC4 609 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 LRRC8CQ8TDW0 803 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 CCDC78A2IDD5 438 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 ARHGAP6O43182 974 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 MED7O43513 233 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 ARL13BQ3SXY8 428 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 ARMCX2Q7L311 632 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 C1orf131Q8NDD1 294 aaKnown RBP9.07□□□□□ -0.96
SCN9A-203ENST00000409672 HIPK4Q8NE63 616 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 CCDC138Q96M89 665 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 PSMC2P35998 433 aaKnown RBP9.07□□□□□ -0.96
SCN9A-203ENST00000409672 CRKP46108 304 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 EIF4A1P60842 406 aaKnown RBP9.07□□□□□ -0.96
SCN9A-203ENST00000409672 PAK2Q13177 524 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 CDC37Q16543 378 aaPredicted RBP9.07□□□□□ -0.96
SCN9A-203ENST00000409672 PROSER3Q2NL68 480 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 TAGAPQ8N103 731 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 RMDN3Q96TC7 470 aa9.07□□□□□ -0.96
SCN9A-203ENST00000409672 TLR7Q9NYK1 1049 aaKnown RBP9.07□□□□□ -0.96
SCN9A-203ENST00000409672 MRPS25P82663 173 aaKnown RBP9.06□□□□□ -0.96
SCN9A-203ENST00000409672 SLC10A5Q5PT55 438 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 MLKLQ8NB16 471 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 AGR3Q8TD06 166 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 CLNS1AP54105 237 aaKnown RBP9.06□□□□□ -0.96
SCN9A-203ENST00000409672 SGO2Q562F6 1265 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 ZC3H12BQ5HYM0 836 aaKnown RBP9.06□□□□□ -0.96
SCN9A-203ENST00000409672 SMC5Q8IY18 1101 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 CASS4Q9NQ75 786 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 SENP1Q9P0U3 644 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 PFKFB1P16118 471 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 ART3Q13508 389 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 MTMR1Q13613 665 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 KIAA1755Q5JYT7 1200 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 EGFL8Q99944 293 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 TSPYL2Q9H2G4 693 aaPredicted RBP9.06□□□□□ -0.96
SCN9A-203ENST00000409672 PSMA2P25787 234 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 C6orf203Q9P0P8 240 aaPredicted RBP9.06□□□□□ -0.96
SCN9A-203ENST00000409672 ZNF335Q9H4Z2 1342 aaPredicted RBP9.06□□□□□ -0.96
SCN9A-203ENST00000409672 GOLGA5Q8TBA6 731 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 RAPGEF5Q92565 580 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 KLHL8Q9P2G9 620 aaPredicted RBP9.06□□□□□ -0.96
SCN9A-203ENST00000409672 SP100P23497 879 aaPredicted RBP9.06□□□□□ -0.96
SCN9A-203ENST00000409672 SLFNL1Q499Z3 407 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 PRIMPOLQ96LW4 560 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 XPO4Q9C0E2 1151 aaKnown RBP9.06□□□□□ -0.96
SCN9A-203ENST00000409672 SP110Q9HB58 689 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 CCDC195A0A1B0GUA6 201 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 FCER1AP12319 257 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 WEE1P30291 646 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 ABCC4O15439 1325 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 ZMYM6O95789 1325 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 DUOX2Q9NRD8 1548 aa9.06□□□□□ -0.96
SCN9A-203ENST00000409672 GIGYF1O75420 1035 aaPredicted RBP9.05□□□□□ -0.96
SCN9A-203ENST00000409672 C6orf222P0C671 652 aaPredicted RBP9.05□□□□□ -0.96
SCN9A-203ENST00000409672 RUFY4Q6ZNE9 571 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 SEPT5Q99719 369 aaPredicted RBP9.05□□□□□ -0.96
SCN9A-203ENST00000409672 SH2D3AQ9BRG2 576 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 COPRSQ9NQ92 184 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 H0YCG3 227 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 ZBTB7BO15156 539 aaPredicted RBP9.05□□□□□ -0.96
SCN9A-203ENST00000409672 SART1O43290 800 aaKnown RBP9.05□□□□□ -0.96
SCN9A-203ENST00000409672 STMN1P16949 149 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 IGFBP4P22692 258 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 NDUFA8P51970 172 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 HIF1AQ16665 826 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 MAML1Q92585 1016 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 COL17A1Q9UMD9 1497 aaPredicted RBP9.05□□□□□ -0.96
SCN9A-203ENST00000409672 CLTAP09496 248 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 PPP3CCP48454 512 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 NOSTRINQ8IVI9 506 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 IGFLR1Q9H665 355 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 LEMD3Q9Y2U8 911 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 MED23Q9ULK4 1368 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 TMEM247A6NEH6 219 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 INPP5BP32019 993 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 CSE1LP55060 971 aaKnown RBP9.05□□□□□ -0.96
SCN9A-203ENST00000409672 FAF2Q96CS3 445 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 CACNA2D2Q9NY47 1150 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 FAM26FQ5R3K3 315 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 RC3H1Q5TC82 1133 aaKnown RBP9.05□□□□□ -0.96
SCN9A-203ENST00000409672 B4GALNT4Q76KP1 1039 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 LCORLQ8N3X6 602 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 B4GALNT2Q8NHY0 566 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 MASTLQ96GX5 879 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 TEKT2Q9UIF3 430 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 ANKRD40Q6AI12 368 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 SWSAP1Q6NVH7 229 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 LLPHQ9BRT6 129 aaKnown RBP9.05□□□□□ -0.96
SCN9A-203ENST00000409672 VCX3AQ9NNX9 186 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 SAR1BQ9Y6B6 198 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 HUS1O60921 280 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 PLS3P13797 630 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 GPSM2P81274 684 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 DAB2P98082 770 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 GUCY2DQ02846 1103 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 TRAPPC8Q9Y2L5 1435 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 RNF40O75150 1001 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 TCP11X2Q5H9J9 407 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms