RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 FAM86B2P0C5J1 330 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 KCNA3P22001 575 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 PSMC6P62333 389 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 KRT76Q01546 638 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 SPECC1LQ69YQ0 1117 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 TWF2Q6IBS0 349 aaKnown RBP12.5□□□□□ -0.41
SNX13-202ENST00000409604 RAD54LQ92698 747 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 RIOX1Q9H6W3 641 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 A1CFQ9NQ94 594 aaKnown RBP12.5□□□□□ -0.41
SNX13-202ENST00000409604 TBC1D8O95759 1140 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 CCDC175P0C221 793 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 COASYQ13057 564 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 ZNF658Q5TYW1 1059 aaPredicted RBP12.5□□□□□ -0.41
SNX13-202ENST00000409604 CCDC50Q8IVM0 306 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 GMCL1Q96IK5 515 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 MXRA8Q9BRK3 442 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 STK17AQ9UEE5 414 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 PDS5AQ29RF7 1337 aaKnown RBP12.5□□□□□ -0.41
SNX13-202ENST00000409604 MYMKA6NI61 221 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 COPB1P53618 953 aaKnown RBP12.5□□□□□ -0.41
SNX13-202ENST00000409604 FKBP3Q00688 224 aaKnown RBP12.5□□□□□ -0.41
SNX13-202ENST00000409604 SETQ01105 290 aaPredicted RBP12.5□□□□□ -0.41
SNX13-202ENST00000409604 CATSPER3Q86XQ3 398 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 ELMO3Q96BJ8 720 aa12.5□□□□□ -0.41
SNX13-202ENST00000409604 UPP2O95045 317 aa12.49□□□□□ -0.41
SNX13-202ENST00000409604 RNASELQ05823 741 aaKnown RBP12.49□□□□□ -0.41
SNX13-202ENST00000409604 HLTFQ14527 1009 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNX13-202ENST00000409604 IL31RAQ8NI17 732 aa12.49□□□□□ -0.41
SNX13-202ENST00000409604 MOV10L1Q9BXT6 1211 aaKnown RBP12.49□□□□□ -0.41
SNX13-202ENST00000409604 POLR3FQ9H1D9 316 aaPredicted RBP12.49□□□□□ -0.41
SNX13-202ENST00000409604 COL1A1P02452 1464 aaPredicted RBP12.49□□□□□ -0.41
SNX13-202ENST00000409604 DSG3P32926 999 aa12.49□□□□□ -0.41
SNX13-202ENST00000409604 PSMC4P43686 418 aa12.49□□□□□ -0.41
SNX13-202ENST00000409604 ACOT2P49753 483 aa12.49□□□□□ -0.41
SNX13-202ENST00000409604 MAP2K1Q02750 393 aaPredicted RBP12.49□□□□□ -0.41
SNX13-202ENST00000409604 AXDND1Q5T1B0 1012 aaPredicted RBP12.49□□□□□ -0.41
SNX13-202ENST00000409604 U2AF1L4Q8WU68 220 aaKnown RBP12.49□□□□□ -0.41
SNX13-202ENST00000409604 ADAMTS3O15072 1205 aa12.49□□□□□ -0.41
SNX13-202ENST00000409604 USP2O75604 605 aaPredicted RBP12.49□□□□□ -0.41
SNX13-202ENST00000409604 PSMC5P62195 406 aa12.49□□□□□ -0.41
SNX13-202ENST00000409604 MFSD14CQ5VZR4 134 aa12.49□□□□□ -0.41
SNX13-202ENST00000409604 CNGA4Q8IV77 575 aa12.49□□□□□ -0.41
SNX13-202ENST00000409604 ABI1Q8IZP0 508 aa12.49□□□□□ -0.41
SNX13-202ENST00000409604 C7orf43Q8WVR3 580 aa12.49□□□□□ -0.41
SNX13-202ENST00000409604 WNK4Q96J92 1243 aa12.49□□□□□ -0.41
SNX13-202ENST00000409604 PDCD2LQ9BRP1 358 aa12.49□□□□□ -0.41
SNX13-202ENST00000409604 MSTO1Q9BUK6 570 aa12.49□□□□□ -0.41
SNX13-202ENST00000409604 ZKSCAN5Q9Y2L8 839 aa12.49□□□□□ -0.41
SNX13-202ENST00000409604 BUB1O43683 1085 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 MED24O75448 989 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 ZNF286BP0CG31 522 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 CYP27A1Q02318 531 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 ASIC2Q16515 512 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 TKFCQ3LXA3 575 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 ADAT2Q7Z6V5 191 aaKnown RBP12.48□□□□□ -0.41
SNX13-202ENST00000409604 REEP2Q9BRK0 252 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 AGXT2Q9BYV1 514 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 PITPNM2Q9BZ72 1349 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 EP400Q96L91 3159 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 ADORA2AP29274 412 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 TCF7P36402 384 aaPredicted RBP12.48□□□□□ -0.41
SNX13-202ENST00000409604 PAFAH1B1P43034 410 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 MAGEA1P43355 309 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 PRKCEQ02156 737 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 TMEM132BQ14DG7 1078 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 TRIM9Q9C026 710 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 UNC45AQ9H3U1 944 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 KLRG2A4D1S0 409 aaPredicted RBP12.48□□□□□ -0.41
SNX13-202ENST00000409604 ZBBXA8MT70 800 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 CLCN3P51790 818 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 EXOC3L4Q17RC7 722 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 AFG1LQ8WV93 481 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 PSPC1Q8WXF1 523 aaKnown RBP12.48□□□□□ -0.41
SNX13-202ENST00000409604 RPS6KC1Q96S38 1066 aa12.48□□□□□ -0.41
SNX13-202ENST00000409604 CICQ96RK0 1608 aaPredicted RBP12.48□□□□□ -0.41
SNX13-202ENST00000409604 TEX33O43247 280 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 BEX3Q00994 111 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.47□□□□□ -0.41
SNX13-202ENST00000409604 SEPT1Q8WYJ6 367 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 ALS2CR12Q96Q35 445 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 ASB14A6NK59 587 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 CLDN3O15551 220 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 STX10O60499 249 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 DESP17661 470 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 JAK3P52333 1124 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 ACTR2P61160 394 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 SMC1AQ14683 1233 aaKnown RBP12.47□□□□□ -0.41
SNX13-202ENST00000409604 ARHGEF6Q15052 776 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 TAB3Q8N5C8 712 aaPredicted RBP12.47□□□□□ -0.41
SNX13-202ENST00000409604 GABPAQ06546 454 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 DEFB115Q30KQ5 88 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 HAUS6Q7Z4H7 955 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 TSC1Q92574 1164 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 ACCSQ96QU6 501 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 ATP6V0A4Q9HBG4 840 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 CTTNBP2NLQ9P2B4 639 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 FZD9O00144 591 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 CCNE1P24864 410 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 ADCYAP1R1P41586 468 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms