RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 TMEM87AQ8NBN3 555 aa18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 GJA10Q969M2 543 aa18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 EMID1Q96A84 441 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 UIMC1Q96RL1 719 aa18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 SEZ6LQ9BYH1 1024 aa18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 GDPD2Q9HCC8 539 aa18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 PRKAG2Q9UGJ0 569 aa18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 VAV3Q9UKW4 847 aa18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 DCDC2CA8MYV0 355 aa18.56■□□□□ 0.56
TSPAN4-208ENST00000409531 WDR64B1ANS9 1081 aa18.56■□□□□ 0.56
TSPAN4-208ENST00000409531 DDX39AO00148 427 aaKnown RBP18.56■□□□□ 0.56
TSPAN4-208ENST00000409531 PQBP1O60828 265 aaKnown RBP18.56■□□□□ 0.56
TSPAN4-208ENST00000409531 JAK3P52333 1124 aa18.56■□□□□ 0.56
TSPAN4-208ENST00000409531 PURAQ00577 322 aaKnown RBP18.56■□□□□ 0.56
TSPAN4-208ENST00000409531 ITGA7Q13683 1181 aa18.56■□□□□ 0.56
TSPAN4-208ENST00000409531 ADALQ6DHV7 355 aa18.56■□□□□ 0.56
TSPAN4-208ENST00000409531 RDM1Q8NG50 284 aa18.56■□□□□ 0.56
TSPAN4-208ENST00000409531 ERMNQ8TAM6 284 aa18.56■□□□□ 0.56
TSPAN4-208ENST00000409531 AFG1LQ8WV93 481 aa18.56■□□□□ 0.56
TSPAN4-208ENST00000409531 LRWD1Q9UFC0 647 aa18.56■□□□□ 0.56
TSPAN4-208ENST00000409531 PCDHA7Q9UN72 937 aa18.56■□□□□ 0.56
TSPAN4-208ENST00000409531 MROH7Q68CQ1 1323 aa18.56■□□□□ 0.56
TSPAN4-208ENST00000409531 NOP56O00567 594 aaKnown RBP18.55■□□□□ 0.56
TSPAN4-208ENST00000409531 MYL3P08590 195 aa18.55■□□□□ 0.56
TSPAN4-208ENST00000409531 SPIRE1Q08AE8 756 aa18.55■□□□□ 0.56
TSPAN4-208ENST00000409531 IL17AQ16552 155 aa18.55■□□□□ 0.56
TSPAN4-208ENST00000409531 NCAPH2Q6IBW4 605 aa18.55■□□□□ 0.56
TSPAN4-208ENST00000409531 B3GNT9Q6UX72 402 aa18.55■□□□□ 0.56
TSPAN4-208ENST00000409531 CHRDL2Q6WN34 429 aa18.55■□□□□ 0.56
TSPAN4-208ENST00000409531 MIER3Q7Z3K6 550 aa18.55■□□□□ 0.56
TSPAN4-208ENST00000409531 SLC43A3Q8NBI5 491 aa18.55■□□□□ 0.56
TSPAN4-208ENST00000409531 MTG1Q9BT17 334 aaPredicted RBP18.55■□□□□ 0.56
TSPAN4-208ENST00000409531 UNC45AQ9H3U1 944 aa18.55■□□□□ 0.56
TSPAN4-208ENST00000409531 GRIN2DO15399 1336 aa18.55■□□□□ 0.56
TSPAN4-208ENST00000409531 POTEMA6NI47 508 aa18.54■□□□□ 0.56
TSPAN4-208ENST00000409531 CHMP2AO43633 222 aa18.54■□□□□ 0.56
TSPAN4-208ENST00000409531 CLTBP09497 229 aa18.54■□□□□ 0.56
TSPAN4-208ENST00000409531 TXLNAP40222 546 aa18.54■□□□□ 0.56
TSPAN4-208ENST00000409531 AXDND1Q5T1B0 1012 aaPredicted RBP18.54■□□□□ 0.56
TSPAN4-208ENST00000409531 HAUS3Q68CZ6 603 aa18.54■□□□□ 0.56
TSPAN4-208ENST00000409531 SPATA33Q96N06 139 aa18.54■□□□□ 0.56
TSPAN4-208ENST00000409531 CLIC6Q96NY7 704 aa18.54■□□□□ 0.56
TSPAN4-208ENST00000409531 GDF15Q99988 308 aa18.54■□□□□ 0.56
TSPAN4-208ENST00000409531 CSRNP2Q9H175 543 aa18.54■□□□□ 0.56
TSPAN4-208ENST00000409531 DISC1Q9NRI5 854 aa18.54■□□□□ 0.56
TSPAN4-208ENST00000409531 SAMM50Q9Y512 469 aa18.54■□□□□ 0.56
TSPAN4-208ENST00000409531 TRIOBPQ9H2D6 2365 aa18.54■□□□□ 0.56
TSPAN4-208ENST00000409531 SLC26A4O43511 780 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 PPFIA4O75335 1185 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 MMP3P08254 477 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 ACTR2P61160 394 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 PSMC6P62333 389 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 FAAP100Q0VG06 881 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 EPHA7Q15375 998 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 DGKDQ16760 1214 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 KRT79Q5XKE5 535 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 MIS18BP1Q6P0N0 1132 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 SH3RF1Q7Z6J0 888 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 PPTC7Q8NI37 304 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 NEK9Q8TD19 979 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 SEPT1Q8WYJ6 367 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 LBHD1Q9BQE6 289 aaPredicted RBP18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 PRO3102Q9H379 93 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 PRDM5Q9NQX1 630 aaPredicted RBP18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 PDLIM7Q9NR12 457 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 TMEM39AQ9NV64 488 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 PCDHA10Q9Y5I2 948 aa18.53■□□□□ 0.56
TSPAN4-208ENST00000409531 A0A1W2PQ27 194 aa18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 A0A1W2PQ64 194 aa18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 A0A1W2PQD8 194 aa18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 TRIM43BA6NCK2 446 aa18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 CCNE2O96020 404 aa18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 PSAPP07602 524 aa18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 BMP8BP34820 402 aa18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 UBA7P41226 1012 aa18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 MAGEA10P43363 369 aaPredicted RBP18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 SP4Q02446 784 aa18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 GRIN1Q05586 938 aa18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 FAM126BQ8IXS8 530 aa18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 TRIM43Q96BQ3 446 aaPredicted RBP18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 BCAS3Q9H6U6 928 aa18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 FAM13BQ9NYF5 915 aa18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 LOXHD1Q8IVV2 1947 aa18.52■□□□□ 0.56
TSPAN4-208ENST00000409531 KIAA0355O15063 1070 aa18.51■□□□□ 0.55
TSPAN4-208ENST00000409531 TLR3O15455 904 aaKnown RBP18.51■□□□□ 0.55
TSPAN4-208ENST00000409531 SORBS3O60504 671 aa18.51■□□□□ 0.55
TSPAN4-208ENST00000409531 ATG7O95352 703 aa18.51■□□□□ 0.55
TSPAN4-208ENST00000409531 CMA1P23946 247 aa18.51■□□□□ 0.55
TSPAN4-208ENST00000409531 HSDL1Q3SXM5 330 aa18.51■□□□□ 0.55
TSPAN4-208ENST00000409531 SNX29Q8TEQ0 813 aa18.51■□□□□ 0.55
TSPAN4-208ENST00000409531 GPR20Q99678 358 aa18.51■□□□□ 0.55
TSPAN4-208ENST00000409531 CCSER1Q9C0I3 900 aa18.51■□□□□ 0.55
TSPAN4-208ENST00000409531 KDM3AQ9Y4C1 1321 aa18.51■□□□□ 0.55
TSPAN4-208ENST00000409531 EML1O00423 815 aa18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 DKC1O60832 514 aaKnown RBP eCLIP18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 PRPF40AO75400 957 aaKnown RBP18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 CD4P01730 458 aa18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 P4HBP07237 508 aaKnown RBP18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 SUPT20HL2P0C7V6 817 aa18.5■□□□□ 0.55
TSPAN4-208ENST00000409531 MUTP22033 750 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms