RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 SCTRP47872 440 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 COBLL1Q53SF7 1204 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 GKAP1Q5VSY0 366 aaPredicted RBP16.93■□□□□ 0.3
LIMS2-205ENST00000409455 KLHL7Q8IXQ5 586 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 LRRC15Q8TF66 581 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 AK8Q96MA6 479 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 SEMA6BQ9H3T3 888 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 SH3GLB2Q9NR46 395 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 ECE2O60344 883 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 PRPHP41219 470 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 RNASE9P60153 205 aaKnown RBP16.92■□□□□ 0.3
LIMS2-205ENST00000409455 QPCTQ16769 361 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 CENPPQ6IPU0 288 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 TTLL6Q8N841 843 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 USP38Q8NB14 1042 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 SLC44A5Q8NCS7 719 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 KIAA0895Q8NCT3 520 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 GPKOWQ92917 476 aaPredicted RBP eCLIP16.92■□□□□ 0.3
LIMS2-205ENST00000409455 EDEM3Q9BZQ6 932 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 ATP6V0A4Q9HBG4 840 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 BCCIPQ9P287 314 aaKnown RBP eCLIP16.92■□□□□ 0.3
LIMS2-205ENST00000409455 FLT1P17948 1338 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 DLEC1Q9Y238 1755 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 ZBTB7AO95365 584 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 KCNA3P22001 575 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 CLNS1AP54105 237 aaKnown RBP16.92■□□□□ 0.3
LIMS2-205ENST00000409455 PPP2R2AP63151 447 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 EHHADHQ08426 723 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 ZNF844Q08AG5 666 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 NAB2Q15742 525 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 SPRED3Q2MJR0 410 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 MEI1Q5TIA1 1274 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 FAM228AQ86W67 206 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 NUCKS1Q9H1E3 243 aaKnown RBP16.92■□□□□ 0.3
LIMS2-205ENST00000409455 MKNK2Q9HBH9 465 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 C10orf71Q711Q0 1435 aa16.92■□□□□ 0.3
LIMS2-205ENST00000409455 C5orf60A6NFR6 353 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 DPEP1P16444 411 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 TMOD1P28289 359 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 TFAP4Q01664 338 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 XRCC4Q13426 336 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 E2F5Q15329 346 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 INF2Q27J81 1249 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 NBPF9Q3BBW0 867 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 LACTB2Q53H82 288 aaPredicted RBP16.91■□□□□ 0.3
LIMS2-205ENST00000409455 CC2D2BQ6DHV5 1058 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 OR2W6PQ8NHA6 318 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 TAF4BQ92750 862 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 SLC39A2Q9NP94 309 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 PCDHGC5Q9Y5F6 944 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 MYBP10242 640 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 ERCC3P19447 782 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 ERVK-9P63128 1117 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 MTMR3Q13615 1198 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 STRIP1Q5VSL9 837 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 HGSNATQ68CP4 663 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 ARHGAP27Q6ZUM4 889 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 CCDC125Q86Z20 511 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 TANGO6Q9C0B7 1094 aa16.91■□□□□ 0.3
LIMS2-205ENST00000409455 PACSIN2Q9UNF0 486 aaPredicted RBP16.91■□□□□ 0.3
LIMS2-205ENST00000409455 H0YGN5 161 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 SERPING1P05155 500 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 PAEPP09466 180 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 SATB1Q01826 763 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 PPARDQ03181 441 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 DACT2Q5SW24 774 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 CPLX4Q7Z7G2 160 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 KIAA0825Q8IV33 1275 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 FMNL3Q8IVF7 1028 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 HPS3Q969F9 1004 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 SWAP70Q9UH65 585 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 NFS1Q9Y697 457 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 SNED1Q8TER0 1413 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 ATP2C2O75185 946 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 PICALMQ13492 652 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 AGBL2Q5U5Z8 902 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 SFMBT2Q5VUG0 894 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 TATDN2Q93075 761 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 IL17RBQ9NRM6 502 aa16.9■□□□□ 0.3
LIMS2-205ENST00000409455 DNAJC8O75937 253 aaPredicted RBP16.89■□□□□ 0.29
LIMS2-205ENST00000409455 KLRC1P26715 233 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 ECHS1P30084 290 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 GBP2P32456 591 aaPredicted RBP16.89■□□□□ 0.29
LIMS2-205ENST00000409455 UAP1Q16222 522 aaPredicted RBP16.89■□□□□ 0.29
LIMS2-205ENST00000409455 RCSD1Q6JBY9 416 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 APOBEC3HQ6NTF7 200 aaKnown RBP16.89■□□□□ 0.29
LIMS2-205ENST00000409455 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
LIMS2-205ENST00000409455 STAG2Q8N3U4 1231 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 UBLCP1Q8WVY7 318 aaPredicted RBP16.89■□□□□ 0.29
LIMS2-205ENST00000409455 RAPGEF5Q92565 580 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 TEKT1Q969V4 418 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 HVCN1Q96D96 273 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 KDM4CQ9H3R0 1056 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 USP40Q9NVE5 1235 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 PCDHA6Q9UN73 950 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 ATF5Q9Y2D1 282 aaPredicted RBP16.89■□□□□ 0.29
LIMS2-205ENST00000409455 PCDHA8Q9Y5H6 950 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 ROBO3Q96MS0 1386 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 CCDC189A1A4V9 331 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 CES2O00748 559 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms