RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 LRRC8DQ7L1W4 858 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 FAM184AQ8NB25 1140 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 SLC5A5Q92911 643 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 TNPO1Q92973 898 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 WNT8BQ93098 351 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 RIT2Q99578 217 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 DDX25Q9UHL0 483 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 TRPC6Q9Y210 931 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 BTBD18B2RXH4 712 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 GAS7O60861 476 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 PFKMP08237 780 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 THPOP40225 353 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 TRIM71Q2Q1W2 868 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 EARS2Q5JPH6 523 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 LRCH2Q5VUJ6 765 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 OTOP2Q7RTS6 562 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 SMAP1Q8IYB5 467 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 DIS3L2Q8IYB7 885 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 GJA10Q969M2 543 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 C8orf76Q96K31 380 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 MBOAT7Q96N66 472 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 NAP1L4Q99733 375 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 FTOQ9C0B1 505 aaKnown RBP eCLIP20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 ZNF302Q9NR11 478 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 SAMM50Q9Y512 469 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 PCDHA10Q9Y5I2 948 aa20.3■□□□□ 0.84
PDLIM2-206ENST00000409141 CCNT1O60563 726 aaKnown RBP20.29■□□□□ 0.84
PDLIM2-206ENST00000409141 PSAPP07602 524 aa20.29■□□□□ 0.84
PDLIM2-206ENST00000409141 INSRRP14616 1297 aa20.29■□□□□ 0.84
PDLIM2-206ENST00000409141 SLC26A2P50443 739 aa20.29■□□□□ 0.84
PDLIM2-206ENST00000409141 ADAM17P78536 824 aa20.29■□□□□ 0.84
PDLIM2-206ENST00000409141 GUCY1B3Q02153 619 aa20.29■□□□□ 0.84
PDLIM2-206ENST00000409141 PLCB4Q15147 1175 aa20.29■□□□□ 0.84
PDLIM2-206ENST00000409141 SAFBQ15424 915 aaKnown RBP eCLIP20.29■□□□□ 0.84
PDLIM2-206ENST00000409141 GRIK4Q16099 956 aa20.29■□□□□ 0.84
PDLIM2-206ENST00000409141 ZNF618Q5T7W0 954 aa20.29■□□□□ 0.84
PDLIM2-206ENST00000409141 PPP4R3AQ6IN85 833 aa20.29■□□□□ 0.84
PDLIM2-206ENST00000409141 CCDC60Q8IWA6 550 aaPredicted RBP20.29■□□□□ 0.84
PDLIM2-206ENST00000409141 TNFRSF25Q93038 417 aa20.29■□□□□ 0.84
PDLIM2-206ENST00000409141 VWCEQ96DN2 955 aa20.29■□□□□ 0.84
PDLIM2-206ENST00000409141 TEKT3Q9BXF9 490 aa20.29■□□□□ 0.84
PDLIM2-206ENST00000409141 TRIP12Q14669 1992 aaPredicted RBP20.28■□□□□ 0.84
PDLIM2-206ENST00000409141 POTEB3A0JP26 581 aa20.28■□□□□ 0.84
PDLIM2-206ENST00000409141 FAM205CA6NFA0 338 aa20.28■□□□□ 0.84
PDLIM2-206ENST00000409141 RRN3P2A6NIE6 340 aa20.28■□□□□ 0.84
PDLIM2-206ENST00000409141 WDR64B1ANS9 1081 aa20.28■□□□□ 0.84
PDLIM2-206ENST00000409141 CD2BP2O95400 341 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-206ENST00000409141 GCFC2P16383 781 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-206ENST00000409141 MCM2P49736 904 aa20.28■□□□□ 0.84
PDLIM2-206ENST00000409141 IGBP1P78318 339 aa20.28■□□□□ 0.84
PDLIM2-206ENST00000409141 PDXDC2PQ6P474 469 aa20.28■□□□□ 0.84
PDLIM2-206ENST00000409141 POTEBQ6S5H4 581 aa20.28■□□□□ 0.84
PDLIM2-206ENST00000409141 HERVK_113Q902F9 699 aa20.28■□□□□ 0.84
PDLIM2-206ENST00000409141 TMX3Q96JJ7 454 aa20.28■□□□□ 0.84
PDLIM2-206ENST00000409141 MTIF3Q9H2K0 278 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-206ENST00000409141 CHMP2AO43633 222 aa20.27■□□□□ 0.84
PDLIM2-206ENST00000409141 SLC37A4O43826 429 aa20.27■□□□□ 0.84
PDLIM2-206ENST00000409141 PSMD10O75832 226 aa20.27■□□□□ 0.84
PDLIM2-206ENST00000409141 PARNO95453 639 aaKnown RBP20.27■□□□□ 0.84
PDLIM2-206ENST00000409141 RASIP1Q5U651 963 aa20.27■□□□□ 0.84
PDLIM2-206ENST00000409141 ETNPPLQ8TBG4 499 aa20.27■□□□□ 0.84
PDLIM2-206ENST00000409141 DISC1Q9NRI5 854 aa20.27■□□□□ 0.84
PDLIM2-206ENST00000409141 TUBE1Q9UJT0 475 aa20.27■□□□□ 0.84
PDLIM2-206ENST00000409141 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-206ENST00000409141 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-206ENST00000409141 RSPH10B2B2RC85 870 aa20.26■□□□□ 0.83
PDLIM2-206ENST00000409141 RSPH10BP0C881 870 aa20.26■□□□□ 0.83
PDLIM2-206ENST00000409141 ACTN1P12814 892 aa20.26■□□□□ 0.83
PDLIM2-206ENST00000409141 MARCH8Q5T0T0 291 aa20.26■□□□□ 0.83
PDLIM2-206ENST00000409141 CKAP2LQ8IYA6 745 aa20.26■□□□□ 0.83
PDLIM2-206ENST00000409141 UNC45AQ9H3U1 944 aa20.26■□□□□ 0.83
PDLIM2-206ENST00000409141 GABBR1Q9UBS5 961 aa20.26■□□□□ 0.83
PDLIM2-206ENST00000409141 MAFBQ9Y5Q3 323 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-206ENST00000409141 ZBBXA8MT70 800 aa20.25■□□□□ 0.83
PDLIM2-206ENST00000409141 MARCH6O60337 910 aa20.25■□□□□ 0.83
PDLIM2-206ENST00000409141 HBP1O60381 514 aa20.25■□□□□ 0.83
PDLIM2-206ENST00000409141 SFNP31947 248 aa20.25■□□□□ 0.83
PDLIM2-206ENST00000409141 JAK3P52333 1124 aa20.25■□□□□ 0.83
PDLIM2-206ENST00000409141 SMAD3P84022 425 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-206ENST00000409141 TRAF7Q6Q0C0 670 aa20.25■□□□□ 0.83
PDLIM2-206ENST00000409141 RUFY4Q6ZNE9 571 aa20.25■□□□□ 0.83
PDLIM2-206ENST00000409141 FBXO18Q8NFZ0 1043 aa20.25■□□□□ 0.83
PDLIM2-206ENST00000409141 ATP8B4Q8TF62 1192 aa20.25■□□□□ 0.83
PDLIM2-206ENST00000409141 CXXC1Q9P0U4 656 aaPredicted RBP20.25■□□□□ 0.83
PDLIM2-206ENST00000409141 KAT6AQ92794 2004 aa20.25■□□□□ 0.83
PDLIM2-206ENST00000409141 MBLAC1A4D2B0 266 aaPredicted RBP20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 NBNO60934 754 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 CAND2O75155 1236 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 ATP4AP20648 1035 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 GPNMBQ14956 572 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 GPR153Q6NV75 609 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 TAF2Q6P1X5 1199 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 TRMT1LQ7Z2T5 733 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 MIER3Q7Z3K6 550 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 TRAPPC12Q8WVT3 735 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 FAM20AQ96MK3 541 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 KCNMB3Q9NPA1 279 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 SCN5AQ14524 2016 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 LAMA3Q16787 3333 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 CTSHP09668 335 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms