RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 DOCK2Q92608 1830 aa13.77□□□□□ -0.2
ATG9A-203ENST00000409033 IGKV6D-41A0A0C4DH26 115 aa13.77□□□□□ -0.2
ATG9A-203ENST00000409033 KRT13P13646 458 aa13.77□□□□□ -0.2
ATG9A-203ENST00000409033 LRRC63Q05C16 580 aa13.77□□□□□ -0.2
ATG9A-203ENST00000409033 KCNH2Q12809 1159 aa13.77□□□□□ -0.2
ATG9A-203ENST00000409033 BMS1Q14692 1282 aaKnown RBP13.77□□□□□ -0.2
ATG9A-203ENST00000409033 GOLGA6L1Q8N7Z2 621 aa13.77□□□□□ -0.2
ATG9A-203ENST00000409033 ELMO3Q96BJ8 720 aa13.77□□□□□ -0.2
ATG9A-203ENST00000409033 ZNF668Q96K58 619 aaPredicted RBP13.77□□□□□ -0.2
ATG9A-203ENST00000409033 WDR11Q9BZH6 1224 aa13.77□□□□□ -0.2
ATG9A-203ENST00000409033 CDC23Q9UJX2 597 aa13.77□□□□□ -0.2
ATG9A-203ENST00000409033 SAR1BQ9Y6B6 198 aa13.77□□□□□ -0.2
ATG9A-203ENST00000409033 TIAM2Q8IVF5 1701 aa13.77□□□□□ -0.21
ATG9A-203ENST00000409033 PAFAH1B1P43034 410 aa13.77□□□□□ -0.21
ATG9A-203ENST00000409033 CASP4P49662 377 aa13.77□□□□□ -0.21
ATG9A-203ENST00000409033 EXOC3L4Q17RC7 722 aa13.77□□□□□ -0.21
ATG9A-203ENST00000409033 KIAA0753Q2KHM9 967 aa13.77□□□□□ -0.21
ATG9A-203ENST00000409033 ATG4CQ96DT6 458 aa13.77□□□□□ -0.21
ATG9A-203ENST00000409033 P2RX7Q99572 595 aaKnown RBP13.77□□□□□ -0.21
ATG9A-203ENST00000409033 GOLPH3Q9H4A6 298 aa13.77□□□□□ -0.21
ATG9A-203ENST00000409033 COL5A3P25940 1745 aaPredicted RBP13.77□□□□□ -0.21
ATG9A-203ENST00000409033 ATP1A1P05023 1023 aaKnown RBP13.77□□□□□ -0.21
ATG9A-203ENST00000409033 GPS2Q13227 327 aa13.77□□□□□ -0.21
ATG9A-203ENST00000409033 SNRNP48Q6IEG0 339 aaKnown RBP13.77□□□□□ -0.21
ATG9A-203ENST00000409033 GJB7Q6PEY0 223 aa13.77□□□□□ -0.21
ATG9A-203ENST00000409033 GSPT2Q8IYD1 628 aaKnown RBP13.77□□□□□ -0.21
ATG9A-203ENST00000409033 CEP89Q96ST8 783 aa13.77□□□□□ -0.21
ATG9A-203ENST00000409033 PARD6BQ9BYG5 372 aa13.77□□□□□ -0.21
ATG9A-203ENST00000409033 TMOD4Q9NZQ9 345 aa13.77□□□□□ -0.21
ATG9A-203ENST00000409033 TAF3Q5VWG9 929 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 PLA2G4FQ68DD2 849 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 STXBP4Q6ZWJ1 553 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 APTXQ7Z2E3 356 aaKnown RBP13.76□□□□□ -0.21
ATG9A-203ENST00000409033 ADAT2Q7Z6V5 191 aaKnown RBP13.76□□□□□ -0.21
ATG9A-203ENST00000409033 HAUS4Q9H6D7 363 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 PARVGQ9HBI0 331 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 GCNT4Q9P109 453 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 SLC9A1P19634 815 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 GTF2F1P35269 517 aaKnown RBP eCLIP13.76□□□□□ -0.21
ATG9A-203ENST00000409033 MTMR1Q13613 665 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 EAPPQ56P03 285 aaPredicted RBP13.76□□□□□ -0.21
ATG9A-203ENST00000409033 GADL1Q6ZQY3 521 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 RNF207Q6ZRF8 634 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 NLRX1Q86UT6 975 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 VPS36Q86VN1 386 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 PRPF38AQ8NAV1 312 aaKnown RBP13.76□□□□□ -0.21
ATG9A-203ENST00000409033 TRERF1Q96PN7 1200 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 CAMKK2Q96RR4 588 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 GTPBP4Q9BZE4 634 aaKnown RBP13.76□□□□□ -0.21
ATG9A-203ENST00000409033 TMX2Q9Y320 296 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 WNK3Q9BYP7 1800 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 EFCAB8A8MWE9 144 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 GFPT2O94808 682 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 NR3C1P04150 777 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 NPEPPSP55786 919 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 PEX3P56589 373 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 C2orf54Q08AI8 447 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 SPDYE2Q495Y8 402 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 SEPT14Q6ZU15 432 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 FAM186BQ8IYM0 893 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 EHBP1Q8NDI1 1231 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 U2AF1L4Q8WU68 220 aaKnown RBP13.76□□□□□ -0.21
ATG9A-203ENST00000409033 KIFC3Q9BVG8 833 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 RNF146Q9NTX7 359 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 GGA3Q9NZ52 723 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 EHD2Q9NZN4 543 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 CAPN11Q9UMQ6 739 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
ATG9A-203ENST00000409033 LAMB2P55268 1798 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 CTIFO43310 598 aaKnown RBP13.75□□□□□ -0.21
ATG9A-203ENST00000409033 DLATP10515 647 aaKnown RBP13.75□□□□□ -0.21
ATG9A-203ENST00000409033 SSR1P43307 286 aaKnown RBP13.75□□□□□ -0.21
ATG9A-203ENST00000409033 GYS2P54840 703 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 COG2Q14746 738 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 ANKRD35Q8N283 1001 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 SCFD1Q8WVM8 642 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 IFT81Q8WYA0 676 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 TCHPQ9BT92 498 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 PRELPP51888 382 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 HLTFQ14527 1009 aaKnown RBP eCLIP13.75□□□□□ -0.21
ATG9A-203ENST00000409033 TATDN1Q6P1N9 297 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 IL31RAQ8NI17 732 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 GMCL1Q96IK5 515 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 FAM20AQ96MK3 541 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 TAAR1Q96RJ0 339 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 GPRC5CQ9NQ84 441 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 BCORQ6W2J9 1755 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 NHSQ6T4R5 1651 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 TUBB4AP04350 444 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 RPS6P62753 249 aaKnown RBP13.75□□□□□ -0.21
ATG9A-203ENST00000409033 EHHADHQ08426 723 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 BAATQ14032 418 aaPredicted RBP13.75□□□□□ -0.21
ATG9A-203ENST00000409033 RUFY1Q96T51 708 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 SUGCTQ9HAC7 445 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 HYOU1Q9Y4L1 999 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 ARAP2Q8WZ64 1704 aa13.75□□□□□ -0.21
ATG9A-203ENST00000409033 SOX10P56693 466 aa13.74□□□□□ -0.21
ATG9A-203ENST00000409033 KNOP1Q1ED39 458 aaKnown RBP13.74□□□□□ -0.21
ATG9A-203ENST00000409033 DNAJC21Q5F1R6 531 aaKnown RBP13.74□□□□□ -0.21
ATG9A-203ENST00000409033 CENPPQ6IPU0 288 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms