RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 CARSP49589 748 aaKnown RBP19.05■□□□□ 0.64
SMPD4-202ENST00000409031 LRRC14Q15048 493 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 NXNQ6DKJ4 435 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 XAB2Q9HCS7 855 aaKnown RBP19.05■□□□□ 0.64
SMPD4-202ENST00000409031 CRCPO75575 148 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 SRGNP10124 158 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 CD19P15391 556 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 GAP43P17677 238 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 NAIF1Q69YI7 327 aaPredicted RBP19.05■□□□□ 0.64
SMPD4-202ENST00000409031 RBM12Q9NTZ6 932 aaKnown RBP19.05■□□□□ 0.64
SMPD4-202ENST00000409031 PPP1R1BQ9UD71 204 aaPredicted RBP19.05■□□□□ 0.64
SMPD4-202ENST00000409031 AMACRQ9UHK6 382 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 PTK2Q05397 1052 aa19.04■□□□□ 0.64
SMPD4-202ENST00000409031 TMEM154Q6P9G4 183 aa19.04■□□□□ 0.64
SMPD4-202ENST00000409031 DNAJC9Q8WXX5 260 aa19.04■□□□□ 0.64
SMPD4-202ENST00000409031 CDKL2Q92772 493 aa19.04■□□□□ 0.64
SMPD4-202ENST00000409031 MLXIPLQ9NP71 852 aa19.04■□□□□ 0.64
SMPD4-202ENST00000409031 TCP11X1B4DZS4 312 aa19.04■□□□□ 0.64
SMPD4-202ENST00000409031 CENPUQ71F23 418 aa19.04■□□□□ 0.64
SMPD4-202ENST00000409031 KCNG1Q9UIX4 513 aa19.04■□□□□ 0.64
SMPD4-202ENST00000409031 SGK1O00141 431 aa19.04■□□□□ 0.64
SMPD4-202ENST00000409031 MAP2K7O14733 419 aa19.04■□□□□ 0.64
SMPD4-202ENST00000409031 TMOD1P28289 359 aa19.04■□□□□ 0.64
SMPD4-202ENST00000409031 CDC37Q16543 378 aaPredicted RBP19.04■□□□□ 0.64
SMPD4-202ENST00000409031 CADPS2Q86UW7 1296 aa19.04■□□□□ 0.64
SMPD4-202ENST00000409031 TBCKQ8TEA7 893 aa19.04■□□□□ 0.64
SMPD4-202ENST00000409031 TULP2O00295 520 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 C1orf146Q5VVC0 180 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 MAML1Q92585 1016 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 CCDC68Q9H2F9 335 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 POLR1AO95602 1720 aaPredicted RBP19.03■□□□□ 0.64
SMPD4-202ENST00000409031 SCP2P22307 547 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 CDC27P30260 824 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 PRR16Q569H4 304 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 SWT1Q5T5J6 900 aaKnown RBP19.03■□□□□ 0.64
SMPD4-202ENST00000409031 SGMS1Q86VZ5 419 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 PKD2L1Q9P0L9 805 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 PPARGC1AQ9UBK2 798 aaKnown RBP19.03■□□□□ 0.64
SMPD4-202ENST00000409031 PAIP2BQ9ULR5 123 aaKnown RBP19.03■□□□□ 0.64
SMPD4-202ENST00000409031 LRRN2O75325 713 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 GOLGA8HP0CJ92 632 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 TNNI1P19237 187 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 BCAMP50895 628 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 CCDC92Q53HC0 331 aaPredicted RBP19.03■□□□□ 0.64
SMPD4-202ENST00000409031 PRMT1Q99873 361 aaKnown RBP19.03■□□□□ 0.64
SMPD4-202ENST00000409031 MXD3Q9BW11 206 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 TRAIPQ9BWF2 469 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 IL25Q9H293 177 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 PDXDC1Q6P996 788 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 MAPKAPK5Q8IW41 473 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 LRRN4CLQ8ND94 238 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 NT5C1BQ96P26 610 aa19.03■□□□□ 0.64
SMPD4-202ENST00000409031 STRBPQ96SI9 672 aaKnown RBP19.03■□□□□ 0.64
SMPD4-202ENST00000409031 IQANK1A0A1B0GTG1 560 aa19.02■□□□□ 0.64
SMPD4-202ENST00000409031 GAS7O60861 476 aa19.02■□□□□ 0.64
SMPD4-202ENST00000409031 PLS3P13797 630 aa19.02■□□□□ 0.64
SMPD4-202ENST00000409031 MDM2Q00987 491 aaPredicted RBP19.02■□□□□ 0.64
SMPD4-202ENST00000409031 TRIP13Q15645 432 aaPredicted RBP19.02■□□□□ 0.64
SMPD4-202ENST00000409031 TGFBRAP1Q8WUH2 860 aa19.02■□□□□ 0.64
SMPD4-202ENST00000409031 PPWD1Q96BP3 646 aaKnown RBP19.02■□□□□ 0.64
SMPD4-202ENST00000409031 KIF9Q9HAQ2 790 aa19.02■□□□□ 0.64
SMPD4-202ENST00000409031 DNAJC17Q9NVM6 304 aaKnown RBP19.02■□□□□ 0.64
SMPD4-202ENST00000409031 RPS6KA5O75582 802 aa19.02■□□□□ 0.64
SMPD4-202ENST00000409031 OXER1Q8TDS5 423 aa19.02■□□□□ 0.64
SMPD4-202ENST00000409031 GIPC1O14908 333 aa19.02■□□□□ 0.64
SMPD4-202ENST00000409031 NVLO15381 856 aaKnown RBP19.02■□□□□ 0.64
SMPD4-202ENST00000409031 HARSP12081 509 aaKnown RBP19.02■□□□□ 0.64
SMPD4-202ENST00000409031 LLGL1Q15334 1064 aa19.02■□□□□ 0.64
SMPD4-202ENST00000409031 PI16Q6UXB8 463 aa19.02■□□□□ 0.64
SMPD4-202ENST00000409031 ANO5Q75V66 913 aa19.02■□□□□ 0.64
SMPD4-202ENST00000409031 CXorf38Q8TB03 319 aa19.02■□□□□ 0.64
SMPD4-202ENST00000409031 TTC25Q96NG3 672 aa19.02■□□□□ 0.64
SMPD4-202ENST00000409031 SH3GLB2Q9NR46 395 aa19.02■□□□□ 0.64
SMPD4-202ENST00000409031 SCTRP47872 440 aa19.02■□□□□ 0.63
SMPD4-202ENST00000409031 GRAMD4Q6IC98 578 aa19.02■□□□□ 0.63
SMPD4-202ENST00000409031 RCSD1Q6JBY9 416 aa19.02■□□□□ 0.63
SMPD4-202ENST00000409031 LONP2Q86WA8 852 aa19.02■□□□□ 0.63
SMPD4-202ENST00000409031 TEKT4Q8WW24 435 aa19.02■□□□□ 0.63
SMPD4-202ENST00000409031 ZBTB10Q96DT7 871 aa19.02■□□□□ 0.63
SMPD4-202ENST00000409031 MGEA5O60502 916 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 ANP32DO95626 131 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 CYB5R4Q7L1T6 521 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 TBC1D10CQ8IV04 446 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 GUF1Q8N442 669 aaKnown RBP19.01■□□□□ 0.63
SMPD4-202ENST00000409031 KCNB2Q92953 911 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 ISCUQ9H1K1 167 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 PNMA2Q9UL42 364 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 MMEL1Q495T6 779 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 MSL3Q8N5Y2 521 aaKnown RBP19.01■□□□□ 0.63
SMPD4-202ENST00000409031 TTC1Q99614 292 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 hCG_1984214I3L0E3 225 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 GSTA1P08263 222 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 ARFIP2P53365 341 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 PABPC4Q13310 644 aaKnown RBP eCLIP19.01■□□□□ 0.633e-6■□□□□ 9
SMPD4-202ENST00000409031 NBPF20Q3BBV1 942 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 PPP1R2P3Q6NXS1 205 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 ZNF713Q8N859 430 aaPredicted RBP19.01■□□□□ 0.63
SMPD4-202ENST00000409031 ARL8AQ96BM9 186 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 MS4A14Q96JA4 679 aa19.01■□□□□ 0.63
SMPD4-202ENST00000409031 FAM161BQ96MY7 647 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms