RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SMAP1Q8IYB5 467 aaPredicted RBP10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 USP38Q8NB14 1042 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 PHKBQ93100 1093 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 PGBD1Q96JS3 809 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 BCAS3Q9H6U6 928 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 PDRG1Q9NUG6 133 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 INSL6Q9Y581 213 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 COL1A2P08123 1366 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 MBLAC1A4D2B0 266 aaPredicted RBP10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 IPO5O00410 1097 aaKnown RBP10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 HBP1O60381 514 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 ARP10275 920 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 MARK3P27448 753 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 CCT2P78371 535 aaKnown RBP10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 GPNMBQ14956 572 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 NTRK3Q16288 839 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 PKN1Q16512 942 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 ODR4Q5SWX8 454 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 ZNF746Q6NUN9 644 aaPredicted RBP10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 NME8Q8N427 588 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 IL27Q8NEV9 243 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 DBF4BQ8NFT6 615 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 WNT8BQ93098 351 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 FAM167AQ96KS9 214 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 SAMD11Q96NU1 681 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 ZNF577Q9BSK1 485 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 IFIH1Q9BYX4 1025 aaKnown RBP10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 RNF216Q9NWF9 866 aaPredicted RBP10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 TMEM260Q9NX78 707 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 THEGQ9P2T0 379 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 CEP131Q9UPN4 1083 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 SQORQ9Y6N5 450 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 TET1Q8NFU7 2136 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 MYO9BQ13459 2157 aa10.31□□□□□ -0.76
SNORD88A-201ENST00000408314 CUL9Q8IWT3 2517 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 POTEB3A0JP26 581 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 ATG7O95352 703 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 PSAPP07602 524 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 INSRRP14616 1297 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 MYOGP15173 224 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 POU3F3P20264 500 aaPredicted RBP10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 CIITAP33076 1130 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 USP11P51784 963 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 MRPS6P82932 125 aaKnown RBP10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 TAP1Q03518 808 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 ITGB3BPQ13352 177 aaPredicted RBP10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 TOB2Q14106 344 aaPredicted RBP10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 HIC1Q14526 733 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 MBTPS1Q14703 1052 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 AAK1Q2M2I8 961 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 ZNF484Q5JVG2 852 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 POTEBQ6S5H4 581 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 MYOCDQ8IZQ8 938 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 ZNF710Q8N1W2 664 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 ATP8B4Q8TF62 1192 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 ATXN2LQ8WWM7 1075 aaKnown RBP10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 CRYGNQ8WXF5 182 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 ARNTL2Q8WYA1 636 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 WASF1Q92558 559 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 TGS1Q96RS0 853 aaKnown RBP10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 NAP1L4Q99733 375 aaKnown RBP10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 FTHL17Q9BXU8 183 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 UPF3BQ9BZI7 483 aaKnown RBP10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 NCOA5Q9HCD5 579 aaKnown RBP10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 ZNF302Q9NR11 478 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 LMCD1Q9NZU5 365 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 VPS54Q9P1Q0 977 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 PCDHA4Q9UN74 947 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 STK36Q9NRP7 1315 aa10.3□□□□□ -0.76
SNORD88A-201ENST00000408314 MICAL3Q7RTP6 2002 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 COL4A6Q14031 1691 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 IGLV3-22A0A075B6J6 115 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 IGKV6D-21A0A0A0MT36 114 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 WDR64B1ANS9 1081 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 FAM86B1E9PN63 330 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 DDX39AO00148 427 aaKnown RBP10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 FAM86B2P0C5J1 330 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 IGBP1P78318 339 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 DEFB103AP81534 67 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 PLCB4Q15147 1175 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 PRR16Q569H4 304 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 TJAP1Q5JTD0 557 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 PDXDC2PQ6P474 469 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 MOXD1Q6UVY6 613 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 ABHD15Q6UXT9 468 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 TSHZ1Q6ZSZ6 1077 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 CKAP2LQ8IYA6 745 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 DAGLBQ8NCG7 672 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 CYP2W1Q8TAV3 490 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 YME1L1Q96TA2 773 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 RIT2Q99578 217 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 SLKQ9H2G2 1235 aaPredicted RBP10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 RWDD3Q9Y3V2 267 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 PCDHA2Q9Y5H9 948 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 PCDHA10Q9Y5I2 948 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 TRPV2Q9Y5S1 764 aa10.29□□□□□ -0.76
SNORD88A-201ENST00000408314 CHD9Q3L8U1 2897 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 SMIM35A0A1B0GVV1 85 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 GAS7O60861 476 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 SFNP31947 248 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms