RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 SIP14410 1827 aa21.99■■□□□ 1.11
SMARCB1-204ENST00000407422 MUC3AQ02505 3323 aa21.99■■□□□ 1.11
SMARCB1-204ENST00000407422 CAND2O75155 1236 aa21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 IFNAR1P17181 557 aa21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 AKAP17AQ02040 695 aaKnown RBP21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 MKRN4PQ13434 485 aaPredicted RBP21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 GRIK4Q16099 956 aa21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 MARCH8Q5T0T0 291 aa21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 FAM117BQ6P1L5 589 aa21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 ZBTB10Q96DT7 871 aa21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 UIMC1Q96RL1 719 aa21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 RNF26Q9BY78 433 aaPredicted RBP21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 C6orf50Q9HD87 102 aa21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 EFCAB14O75071 495 aa21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 GJB5O95377 273 aa21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 REXO1Q8N1G1 1221 aaKnown RBP21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 RASGRP4Q8TDF6 673 aa21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 CCDC12Q8WUD4 166 aaPredicted RBP21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 ARNTL2Q8WYA1 636 aa21.98■■□□□ 1.11
SMARCB1-204ENST00000407422 DDX39AO00148 427 aaKnown RBP21.97■■□□□ 1.11
SMARCB1-204ENST00000407422 CHRNA1P02708 482 aa21.97■■□□□ 1.11
SMARCB1-204ENST00000407422 IGBP1P78318 339 aa21.97■■□□□ 1.11
SMARCB1-204ENST00000407422 NIPA1Q7RTP0 329 aa21.97■■□□□ 1.11
SMARCB1-204ENST00000407422 PLA2G4DQ86XP0 818 aa21.97■■□□□ 1.11
SMARCB1-204ENST00000407422 TM6SF1Q9BZW5 370 aa21.97■■□□□ 1.11
SMARCB1-204ENST00000407422 AZI2Q9H6S1 392 aa21.97■■□□□ 1.11
SMARCB1-204ENST00000407422 VPS54Q9P1Q0 977 aa21.97■■□□□ 1.11
SMARCB1-204ENST00000407422 TUBE1Q9UJT0 475 aa21.97■■□□□ 1.11
SMARCB1-204ENST00000407422 IGLV3-22A0A075B6J6 115 aa21.96■■□□□ 1.11
SMARCB1-204ENST00000407422 CCNE2O96020 404 aa21.96■■□□□ 1.11
SMARCB1-204ENST00000407422 CYP3A4P08684 503 aa21.96■■□□□ 1.11
SMARCB1-204ENST00000407422 INSRRP14616 1297 aa21.96■■□□□ 1.11
SMARCB1-204ENST00000407422 FAM26DQ5JW98 314 aa21.96■■□□□ 1.11
SMARCB1-204ENST00000407422 TTC28Q96AY4 2481 aa21.96■■□□□ 1.11
SMARCB1-204ENST00000407422 MBLAC1A4D2B0 266 aaPredicted RBP21.95■■□□□ 1.1
SMARCB1-204ENST00000407422 GNA11P29992 359 aa21.95■■□□□ 1.1
SMARCB1-204ENST00000407422 TAF2Q6P1X5 1199 aa21.95■■□□□ 1.1
SMARCB1-204ENST00000407422 SEPT8Q92599 483 aa21.95■■□□□ 1.1
SMARCB1-204ENST00000407422 RAD9AQ99638 391 aa21.95■■□□□ 1.1
SMARCB1-204ENST00000407422 DHX15O43143 795 aaKnown RBP21.95■■□□□ 1.1
SMARCB1-204ENST00000407422 ATG7O95352 703 aa21.95■■□□□ 1.1
SMARCB1-204ENST00000407422 STAT5BP51692 787 aa21.95■■□□□ 1.1
SMARCB1-204ENST00000407422 PLCB4Q15147 1175 aa21.95■■□□□ 1.1
SMARCB1-204ENST00000407422 RPAINQ86UA6 219 aa21.95■■□□□ 1.1
SMARCB1-204ENST00000407422 MYOCDQ8IZQ8 938 aa21.95■■□□□ 1.1
SMARCB1-204ENST00000407422 MICALL1Q8N3F8 863 aa21.95■■□□□ 1.1
SMARCB1-204ENST00000407422 TRAPPC12Q8WVT3 735 aa21.95■■□□□ 1.1
SMARCB1-204ENST00000407422 DNAJB3Q8WWF6 145 aa21.95■■□□□ 1.1
SMARCB1-204ENST00000407422 TRPC6Q9Y210 931 aa21.95■■□□□ 1.1
SMARCB1-204ENST00000407422 LOXHD1Q8IVV2 1947 aa21.94■■□□□ 1.1
SMARCB1-204ENST00000407422 KRT40Q6A162 431 aa21.94■■□□□ 1.1
SMARCB1-204ENST00000407422 PLPPR4Q7Z2D5 763 aa21.94■■□□□ 1.1
SMARCB1-204ENST00000407422 ZNF274Q96GC6 653 aaPredicted RBP21.94■■□□□ 1.1
SMARCB1-204ENST00000407422 COL4A4P53420 1690 aaPredicted RBP21.93■■□□□ 1.1
SMARCB1-204ENST00000407422 IPO5O00410 1097 aaKnown RBP21.93■■□□□ 1.1
SMARCB1-204ENST00000407422 AMHP03971 560 aa21.93■■□□□ 1.1
SMARCB1-204ENST00000407422 MGAT3Q09327 533 aa21.93■■□□□ 1.1
SMARCB1-204ENST00000407422 STK3Q13188 491 aa21.93■■□□□ 1.1
SMARCB1-204ENST00000407422 MCTP2Q6DN12 878 aa21.93■■□□□ 1.1
SMARCB1-204ENST00000407422 ABHD15Q6UXT9 468 aa21.93■■□□□ 1.1
SMARCB1-204ENST00000407422 CCDC148Q8NFR7 591 aa21.93■■□□□ 1.1
SMARCB1-204ENST00000407422 IFIH1Q9BYX4 1025 aaKnown RBP21.93■■□□□ 1.1
SMARCB1-204ENST00000407422 PDRG1Q9NUG6 133 aa21.93■■□□□ 1.1
SMARCB1-204ENST00000407422 MTCH2Q9Y6C9 303 aa21.93■■□□□ 1.1
SMARCB1-204ENST00000407422 MYH9P35579 1960 aaKnown RBP21.93■■□□□ 1.1
SMARCB1-204ENST00000407422 IGKV6D-21A0A0A0MT36 114 aa21.92■■□□□ 1.1
SMARCB1-204ENST00000407422 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.92■■□□□ 1.1
SMARCB1-204ENST00000407422 RRN3P2A6NIE6 340 aa21.92■■□□□ 1.1
SMARCB1-204ENST00000407422 GHRP10912 638 aa21.92■■□□□ 1.1
SMARCB1-204ENST00000407422 ERICH6BQ5W0A0 696 aa21.92■■□□□ 1.1
SMARCB1-204ENST00000407422 BICD2Q8TD16 824 aa21.92■■□□□ 1.1
SMARCB1-204ENST00000407422 ZNF577Q9BSK1 485 aa21.92■■□□□ 1.1
SMARCB1-204ENST00000407422 FAM49AQ9H0Q0 323 aaPredicted RBP21.92■■□□□ 1.1
SMARCB1-204ENST00000407422 MTUS1Q9ULD2 1270 aa21.92■■□□□ 1.1
SMARCB1-204ENST00000407422 WDR81Q562E7 1941 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 LINC01553A4QN01 128 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 EDIL3O43854 480 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 SSRP1Q08945 709 aaKnown RBP21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 PRR16Q569H4 304 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 RSPH3Q86UC2 560 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 CCDC60Q8IWA6 550 aaPredicted RBP21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 TRIM22Q8IYM9 498 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 EVPLQ92817 2033 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 POTEB3A0JP26 581 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 BACH1O14867 736 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 LPXNO60711 386 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 POU3F3P20264 500 aaPredicted RBP21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 GRB10Q13322 594 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 LPIN1Q14693 890 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 POTEBQ6S5H4 581 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 LENG9Q96B70 501 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 SH3GLB2Q9NR46 395 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 INSL6Q9Y581 213 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 CDY2AQ9Y6F7 541 aa21.91■■□□□ 1.1
SMARCB1-204ENST00000407422 CPLX1O14810 134 aa21.9■■□□□ 1.1
SMARCB1-204ENST00000407422 UPP2O95045 317 aa21.9■■□□□ 1.1
SMARCB1-204ENST00000407422 CIITAP33076 1130 aa21.9■■□□□ 1.1
SMARCB1-204ENST00000407422 NLRP5P59047 1200 aa21.9■■□□□ 1.1
SMARCB1-204ENST00000407422 HTRA4P83105 476 aaPredicted RBP21.9■■□□□ 1.1
SMARCB1-204ENST00000407422 SETQ01105 290 aaPredicted RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms