RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 FAM160B1Q5W0V3 765 aa33■■■□□ 2.87
USP42-202ENST00000404008 PLPPR4Q7Z2D5 763 aa33■■■□□ 2.87
USP42-202ENST00000404008 IGSF22Q8N9C0 903 aa33■■■□□ 2.87
USP42-202ENST00000404008 ZNF302Q9NR11 478 aa33■■■□□ 2.87
USP42-202ENST00000404008 ZNF215Q9UL58 517 aaPredicted RBP33■■■□□ 2.87
USP42-202ENST00000404008 IGSF9BQ9UPX0 1349 aa33■■■□□ 2.87
USP42-202ENST00000404008 HAS3O00219 553 aa32.99■■■□□ 2.87
USP42-202ENST00000404008 PSEN2P49810 448 aa32.99■■■□□ 2.87
USP42-202ENST00000404008 STAT5BP51692 787 aa32.99■■■□□ 2.87
USP42-202ENST00000404008 PDIA5Q14554 519 aa32.99■■■□□ 2.87
USP42-202ENST00000404008 MFSD10Q14728 455 aa32.99■■■□□ 2.87
USP42-202ENST00000404008 EPHA7Q15375 998 aa32.99■■■□□ 2.87
USP42-202ENST00000404008 LINC00301Q8NCQ3 95 aa32.99■■■□□ 2.87
USP42-202ENST00000404008 VTI1AQ96AJ9 217 aa32.99■■■□□ 2.87
USP42-202ENST00000404008 ERAP1Q9NZ08 941 aa32.99■■■□□ 2.87
USP42-202ENST00000404008 GABBR1Q9UBS5 961 aa32.99■■■□□ 2.87
USP42-202ENST00000404008 CFAP45Q9UL16 551 aa32.99■■■□□ 2.87
USP42-202ENST00000404008 MAFBQ9Y5Q3 323 aaPredicted RBP32.99■■■□□ 2.87
USP42-202ENST00000404008 GRIN2DO15399 1336 aa32.99■■■□□ 2.87
USP42-202ENST00000404008 YEATS4O95619 227 aa32.98■■■□□ 2.87
USP42-202ENST00000404008 STK38Q15208 465 aa32.98■■■□□ 2.87
USP42-202ENST00000404008 KIAA0753Q2KHM9 967 aa32.98■■■□□ 2.87
USP42-202ENST00000404008 CHAMP1Q96JM3 812 aa32.98■■■□□ 2.87
USP42-202ENST00000404008 RAB34Q9BZG1 259 aa32.98■■■□□ 2.87
USP42-202ENST00000404008 VWA3AA6NCI4 1184 aa32.97■■■□□ 2.87
USP42-202ENST00000404008 A0A0U1RQG5 324 aaPredicted RBP32.96■■■□□ 2.87
USP42-202ENST00000404008 MARCKSP29966 332 aaPredicted RBP32.96■■■□□ 2.87
USP42-202ENST00000404008 SLC26A2P50443 739 aa32.96■■■□□ 2.87
USP42-202ENST00000404008 ITGA7Q13683 1181 aa32.96■■■□□ 2.87
USP42-202ENST00000404008 UGCGQ16739 394 aa32.96■■■□□ 2.87
USP42-202ENST00000404008 NBPF20Q3BBV1 942 aa32.96■■■□□ 2.87
USP42-202ENST00000404008 PDXDC2PQ6P474 469 aa32.96■■■□□ 2.87
USP42-202ENST00000404008 EIF2AK1Q9BQI3 630 aaKnown RBP32.96■■■□□ 2.87
USP42-202ENST00000404008 LRWD1Q9UFC0 647 aa32.96■■■□□ 2.87
USP42-202ENST00000404008 FBXO2Q9UK22 296 aaPredicted RBP32.96■■■□□ 2.87
USP42-202ENST00000404008 MARK3P27448 753 aa32.96■■■□□ 2.87
USP42-202ENST00000404008 CHMP4BP1P59074 171 aa32.96■■■□□ 2.87
USP42-202ENST00000404008 KRT85P78386 507 aa32.96■■■□□ 2.87
USP42-202ENST00000404008 SLC39A5Q6ZMH5 540 aa32.96■■■□□ 2.87
USP42-202ENST00000404008 SLC43A3Q8NBI5 491 aa32.96■■■□□ 2.87
USP42-202ENST00000404008 BANK1Q8NDB2 785 aa32.96■■■□□ 2.87
USP42-202ENST00000404008 SRPRBQ9Y5M8 271 aaKnown RBP32.96■■■□□ 2.87
USP42-202ENST00000404008 P4HBP07237 508 aaKnown RBP32.95■■■□□ 2.86
USP42-202ENST00000404008 ATP6V0A1Q93050 837 aa32.95■■■□□ 2.86
USP42-202ENST00000404008 HSD17B14Q9BPX1 270 aa32.95■■■□□ 2.86
USP42-202ENST00000404008 RNPEPQ9H4A4 650 aa32.95■■■□□ 2.86
USP42-202ENST00000404008 RGL1Q9NZL6 768 aa32.95■■■□□ 2.86
USP42-202ENST00000404008 ALPK3Q96L96 1907 aa32.94■■■□□ 2.86
USP42-202ENST00000404008 SPTLC2O15270 562 aa32.94■■■□□ 2.86
USP42-202ENST00000404008 ZNF862O60290 1169 aa32.94■■■□□ 2.86
USP42-202ENST00000404008 ATP4AP20648 1035 aa32.94■■■□□ 2.86
USP42-202ENST00000404008 QARSP47897 775 aaKnown RBP32.94■■■□□ 2.86
USP42-202ENST00000404008 ATN1P54259 1190 aaPredicted RBP32.94■■■□□ 2.86
USP42-202ENST00000404008 GRIN1Q05586 938 aa32.94■■■□□ 2.86
USP42-202ENST00000404008 SNX17Q15036 470 aa32.94■■■□□ 2.86
USP42-202ENST00000404008 NFRKBQ6P4R8 1299 aa32.94■■■□□ 2.86
USP42-202ENST00000404008 NEK9Q8TD19 979 aa32.94■■■□□ 2.86
USP42-202ENST00000404008 PPP1R13LQ8WUF5 828 aa32.94■■■□□ 2.86
USP42-202ENST00000404008 DYDC2Q96IM9 177 aa32.94■■■□□ 2.86
USP42-202ENST00000404008 PPP6R2O75170 966 aa32.93■■■□□ 2.86
USP42-202ENST00000404008 NCLP19338 710 aaKnown RBP32.93■■■□□ 2.86
USP42-202ENST00000404008 PSMC5P62195 406 aa32.93■■■□□ 2.86
USP42-202ENST00000404008 PLCB4Q15147 1175 aa32.93■■■□□ 2.86
USP42-202ENST00000404008 C1orf53Q5VUE5 145 aa32.93■■■□□ 2.86
USP42-202ENST00000404008 ERMNQ8TAM6 284 aa32.93■■■□□ 2.86
USP42-202ENST00000404008 LXNQ9BS40 222 aa32.93■■■□□ 2.86
USP42-202ENST00000404008 SEZ6LQ9BYH1 1024 aa32.93■■■□□ 2.86
USP42-202ENST00000404008 PP2D1A8MPX8 630 aa32.92■■■□□ 2.86
USP42-202ENST00000404008 ARVCFO00192 962 aa32.92■■■□□ 2.86
USP42-202ENST00000404008 SLITRK3O94933 977 aa32.92■■■□□ 2.86
USP42-202ENST00000404008 LONP1P36776 959 aaKnown RBP32.92■■■□□ 2.86
USP42-202ENST00000404008 CDK7P50613 346 aa32.92■■■□□ 2.86
USP42-202ENST00000404008 CYP4A11Q02928 519 aa32.92■■■□□ 2.86
USP42-202ENST00000404008 KRI1Q8N9T8 703 aaKnown RBP32.92■■■□□ 2.86
USP42-202ENST00000404008 KCNG4Q8TDN1 519 aa32.92■■■□□ 2.86
USP42-202ENST00000404008 AK8Q96MA6 479 aa32.92■■■□□ 2.86
USP42-202ENST00000404008 RCOR1Q9UKL0 485 aa32.92■■■□□ 2.86
USP42-202ENST00000404008 KAT6AQ92794 2004 aa32.91■■■□□ 2.86
USP42-202ENST00000404008 PRKCEQ02156 737 aa32.91■■■□□ 2.86
USP42-202ENST00000404008 SESTD1Q86VW0 696 aa32.91■■■□□ 2.86
USP42-202ENST00000404008 C7orf31Q8N865 590 aa32.91■■■□□ 2.86
USP42-202ENST00000404008 ATP8B4Q8TF62 1192 aa32.91■■■□□ 2.86
USP42-202ENST00000404008 POLR3CQ9BUI4 534 aaPredicted RBP32.91■■■□□ 2.86
USP42-202ENST00000404008 WRAP73Q9P2S5 460 aaPredicted RBP32.91■■■□□ 2.86
USP42-202ENST00000404008 STK24Q9Y6E0 443 aa32.91■■■□□ 2.86
USP42-202ENST00000404008 POTEB3A0JP26 581 aa32.9■■■□□ 2.86
USP42-202ENST00000404008 SPATA31C1P0DKV0 1188 aa32.9■■■□□ 2.86
USP42-202ENST00000404008 SMIM10L2AP0DMW4 78 aa32.9■■■□□ 2.86
USP42-202ENST00000404008 SMIM10L2BP0DMW5 78 aa32.9■■■□□ 2.86
USP42-202ENST00000404008 PTPN11Q06124 597 aaPredicted RBP32.9■■■□□ 2.86
USP42-202ENST00000404008 CTTNQ14247 550 aaKnown RBP32.9■■■□□ 2.86
USP42-202ENST00000404008 LRRC26Q2I0M4 334 aa32.9■■■□□ 2.86
USP42-202ENST00000404008 HAUS3Q68CZ6 603 aa32.9■■■□□ 2.86
USP42-202ENST00000404008 POTEBQ6S5H4 581 aa32.9■■■□□ 2.86
USP42-202ENST00000404008 CKAP2LQ8IYA6 745 aa32.9■■■□□ 2.86
USP42-202ENST00000404008 ZSWIM4Q9H7M6 989 aa32.9■■■□□ 2.86
USP42-202ENST00000404008 TUFT1Q9NNX1 390 aa32.9■■■□□ 2.86
USP42-202ENST00000404008 HDAC6Q9UBN7 1215 aa32.9■■■□□ 2.86
USP42-202ENST00000404008 TRPC6Q9Y210 931 aa32.9■■■□□ 2.86
USP42-202ENST00000404008 DKC1O60832 514 aaKnown RBP eCLIP32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms