RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 FAM86B1E9PN63 330 aa17.52■□□□□ 0.4
TPM1-207ENST00000403994 MEIS1O00470 390 aa17.52■□□□□ 0.4
TPM1-207ENST00000403994 PRPF3O43395 683 aaKnown RBP17.52■□□□□ 0.4
TPM1-207ENST00000403994 PPFIA3O75145 1194 aa17.52■□□□□ 0.4
TPM1-207ENST00000403994 FAM86B2P0C5J1 330 aa17.52■□□□□ 0.4
TPM1-207ENST00000403994 EVCP57679 992 aa17.52■□□□□ 0.4
TPM1-207ENST00000403994 ACTR2P61160 394 aa17.52■□□□□ 0.4
TPM1-207ENST00000403994 TOB2Q14106 344 aaPredicted RBP17.52■□□□□ 0.4
TPM1-207ENST00000403994 NTRK3Q16288 839 aa17.52■□□□□ 0.4
TPM1-207ENST00000403994 FAM26DQ5JW98 314 aa17.52■□□□□ 0.4
TPM1-207ENST00000403994 MARCH8Q5T0T0 291 aa17.52■□□□□ 0.4
TPM1-207ENST00000403994 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.52■□□□□ 0.4
TPM1-207ENST00000403994 NIPA1Q7RTP0 329 aa17.52■□□□□ 0.4
TPM1-207ENST00000403994 MICALL1Q8N3F8 863 aa17.52■□□□□ 0.4
TPM1-207ENST00000403994 SEPT8Q92599 483 aa17.52■□□□□ 0.4
TPM1-207ENST00000403994 RAD9AQ99638 391 aa17.52■□□□□ 0.4
TPM1-207ENST00000403994 NCOA5Q9HCD5 579 aaKnown RBP17.52■□□□□ 0.4
TPM1-207ENST00000403994 THEGQ9P2T0 379 aa17.52■□□□□ 0.4
TPM1-207ENST00000403994 IGLV3-22A0A075B6J6 115 aa17.51■□□□□ 0.39
TPM1-207ENST00000403994 AMHP03971 560 aa17.51■□□□□ 0.39
TPM1-207ENST00000403994 IFNAR1P17181 557 aa17.51■□□□□ 0.39
TPM1-207ENST00000403994 PDIA3P30101 505 aaKnown RBP17.51■□□□□ 0.39
TPM1-207ENST00000403994 RALGAPA2Q2PPJ7 1873 aa17.51■□□□□ 0.39
TPM1-207ENST00000403994 FAM117BQ6P1L5 589 aa17.51■□□□□ 0.39
TPM1-207ENST00000403994 RUFY3Q7L099 469 aa17.51■□□□□ 0.39
TPM1-207ENST00000403994 RPAINQ86UA6 219 aa17.51■□□□□ 0.39
TPM1-207ENST00000403994 MYOCDQ8IZQ8 938 aa17.51■□□□□ 0.39
TPM1-207ENST00000403994 RNF26Q9BY78 433 aaPredicted RBP17.51■□□□□ 0.39
TPM1-207ENST00000403994 AZI2Q9H6S1 392 aa17.51■□□□□ 0.39
TPM1-207ENST00000403994 ZSWIM6Q9HCJ5 1215 aa17.51■□□□□ 0.39
TPM1-207ENST00000403994 C6orf50Q9HD87 102 aa17.51■□□□□ 0.39
TPM1-207ENST00000403994 BRWD1Q9NSI6 2320 aa17.51■□□□□ 0.39
TPM1-207ENST00000403994 MTCH2Q9Y6C9 303 aa17.51■□□□□ 0.39
TPM1-207ENST00000403994 MYH9P35579 1960 aaKnown RBP17.5■□□□□ 0.39
TPM1-207ENST00000403994 LINC01553A4QN01 128 aa17.5■□□□□ 0.39
TPM1-207ENST00000403994 CCNE2O96020 404 aa17.5■□□□□ 0.39
TPM1-207ENST00000403994 CHRNA1P02708 482 aa17.5■□□□□ 0.39
TPM1-207ENST00000403994 CYP3A4P08684 503 aa17.5■□□□□ 0.39
TPM1-207ENST00000403994 POU3F3P20264 500 aaPredicted RBP17.5■□□□□ 0.39
TPM1-207ENST00000403994 IGBP1P78318 339 aa17.5■□□□□ 0.39
TPM1-207ENST00000403994 MGAT3Q09327 533 aa17.5■□□□□ 0.39
TPM1-207ENST00000403994 TJAP1Q5JTD0 557 aa17.5■□□□□ 0.39
TPM1-207ENST00000403994 KRT40Q6A162 431 aa17.5■□□□□ 0.39
TPM1-207ENST00000403994 CCDC148Q8NFR7 591 aa17.5■□□□□ 0.39
TPM1-207ENST00000403994 GDPD5Q8WTR4 605 aa17.5■□□□□ 0.39
TPM1-207ENST00000403994 ZBTB10Q96DT7 871 aa17.5■□□□□ 0.39
TPM1-207ENST00000403994 SLC26A6Q9BXS9 759 aa17.5■□□□□ 0.39
TPM1-207ENST00000403994 IFIH1Q9BYX4 1025 aaKnown RBP17.5■□□□□ 0.39
TPM1-207ENST00000403994 TRPC6Q9Y210 931 aa17.5■□□□□ 0.39
TPM1-207ENST00000403994 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.49■□□□□ 0.39
TPM1-207ENST00000403994 DDX39AO00148 427 aaKnown RBP17.49■□□□□ 0.39
TPM1-207ENST00000403994 GTPBP6O43824 516 aaPredicted RBP17.49■□□□□ 0.39
TPM1-207ENST00000403994 LPXNO60711 386 aa17.49■□□□□ 0.39
TPM1-207ENST00000403994 GHRP10912 638 aa17.49■□□□□ 0.39
TPM1-207ENST00000403994 INSRRP14616 1297 aa17.49■□□□□ 0.39
TPM1-207ENST00000403994 ZNF76P36508 570 aa17.49■□□□□ 0.39
TPM1-207ENST00000403994 CCT2P78371 535 aaKnown RBP17.49■□□□□ 0.39
TPM1-207ENST00000403994 HTRA4P83105 476 aaPredicted RBP17.49■□□□□ 0.39
TPM1-207ENST00000403994 SETQ01105 290 aaPredicted RBP17.49■□□□□ 0.39
TPM1-207ENST00000403994 AKAP17AQ02040 695 aaKnown RBP17.49■□□□□ 0.39
TPM1-207ENST00000403994 GRB10Q13322 594 aa17.49■□□□□ 0.39
TPM1-207ENST00000403994 PLCB4Q15147 1175 aa17.49■□□□□ 0.39
TPM1-207ENST00000403994 MCTP2Q6DN12 878 aa17.49■□□□□ 0.39
TPM1-207ENST00000403994 RSPH3Q86UC2 560 aa17.49■□□□□ 0.39
TPM1-207ENST00000403994 PLA2G4DQ86XP0 818 aa17.49■□□□□ 0.39
TPM1-207ENST00000403994 RASGRP4Q8TDF6 673 aa17.49■□□□□ 0.39
TPM1-207ENST00000403994 APBB2Q92870 758 aa17.49■□□□□ 0.39
TPM1-207ENST00000403994 UPF3BQ9BZI7 483 aaKnown RBP17.49■□□□□ 0.39
TPM1-207ENST00000403994 MTUS1Q9ULD2 1270 aa17.49■□□□□ 0.39
TPM1-207ENST00000403994 CYP46A1Q9Y6A2 500 aa17.49■□□□□ 0.39
TPM1-207ENST00000403994 IPO5O00410 1097 aaKnown RBP17.48■□□□□ 0.39
TPM1-207ENST00000403994 ATG7O95352 703 aa17.48■□□□□ 0.39
TPM1-207ENST00000403994 GNA11P29992 359 aa17.48■□□□□ 0.39
TPM1-207ENST00000403994 PLPPR4Q7Z2D5 763 aa17.48■□□□□ 0.39
TPM1-207ENST00000403994 CCDC60Q8IWA6 550 aaPredicted RBP17.48■□□□□ 0.39
TPM1-207ENST00000403994 SP7Q8TDD2 431 aaPredicted RBP17.48■□□□□ 0.39
TPM1-207ENST00000403994 TRAPPC12Q8WVT3 735 aa17.48■□□□□ 0.39
TPM1-207ENST00000403994 DNAJB3Q8WWF6 145 aa17.48■□□□□ 0.39
TPM1-207ENST00000403994 TGS1Q96RS0 853 aaKnown RBP17.48■□□□□ 0.39
TPM1-207ENST00000403994 TM6SF1Q9BZW5 370 aa17.48■□□□□ 0.39
TPM1-207ENST00000403994 FAM49AQ9H0Q0 323 aaPredicted RBP17.48■□□□□ 0.39
TPM1-207ENST00000403994 VPS54Q9P1Q0 977 aa17.48■□□□□ 0.39
TPM1-207ENST00000403994 INSL6Q9Y581 213 aa17.48■□□□□ 0.39
TPM1-207ENST00000403994 ATG2AQ2TAZ0 1938 aa17.47■□□□□ 0.39
TPM1-207ENST00000403994 IGKV6D-21A0A0A0MT36 114 aa17.47■□□□□ 0.39
TPM1-207ENST00000403994 RRN3P2A6NIE6 340 aa17.47■□□□□ 0.39
TPM1-207ENST00000403994 DHX15O43143 795 aaKnown RBP17.47■□□□□ 0.39
TPM1-207ENST00000403994 STAT5BP51692 787 aa17.47■□□□□ 0.39
TPM1-207ENST00000403994 ERVK-21P61565 698 aa17.47■□□□□ 0.39
TPM1-207ENST00000403994 MRPS6P82932 125 aaKnown RBP17.47■□□□□ 0.39
TPM1-207ENST00000403994 LPIN1Q14693 890 aa17.47■□□□□ 0.39
TPM1-207ENST00000403994 BICD2Q8TD16 824 aa17.47■□□□□ 0.39
TPM1-207ENST00000403994 ATXN2LQ8WWM7 1075 aaKnown RBP17.47■□□□□ 0.39
TPM1-207ENST00000403994 CDY2AQ9Y6F7 541 aa17.47■□□□□ 0.39
TPM1-207ENST00000403994 POTEB3A0JP26 581 aa17.46■□□□□ 0.39
TPM1-207ENST00000403994 BACH1O14867 736 aa17.46■□□□□ 0.39
TPM1-207ENST00000403994 RPLP2P05387 115 aaKnown RBP17.46■□□□□ 0.39
TPM1-207ENST00000403994 SLC26A2P50443 739 aa17.46■□□□□ 0.39
TPM1-207ENST00000403994 FBXO47Q5MNV8 452 aa17.46■□□□□ 0.39
TPM1-207ENST00000403994 POTEBQ6S5H4 581 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms