RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 FAM86B1E9PN63 330 aa20.28■□□□□ 0.84
THUMPD2-202ENST00000403537 ATP9AO75110 1047 aa20.28■□□□□ 0.84
THUMPD2-202ENST00000403537 FAM86B2P0C5J1 330 aa20.28■□□□□ 0.84
THUMPD2-202ENST00000403537 INF2Q27J81 1249 aa20.28■□□□□ 0.84
THUMPD2-202ENST00000403537 KRT25Q7Z3Z0 450 aa20.28■□□□□ 0.84
THUMPD2-202ENST00000403537 VWCEQ96DN2 955 aa20.28■□□□□ 0.84
THUMPD2-202ENST00000403537 UIMC1Q96RL1 719 aa20.28■□□□□ 0.84
THUMPD2-202ENST00000403537 SMARCAD1Q9H4L7 1026 aa20.28■□□□□ 0.84
THUMPD2-202ENST00000403537 SLC9A2Q9UBY0 812 aa20.28■□□□□ 0.84
THUMPD2-202ENST00000403537 PCDHA11Q9Y5I1 949 aa20.28■□□□□ 0.84
THUMPD2-202ENST00000403537 NRCAMQ92823 1304 aa20.27■□□□□ 0.84
THUMPD2-202ENST00000403537 MEIS1O00470 390 aa20.27■□□□□ 0.84
THUMPD2-202ENST00000403537 WNT7AO00755 349 aa20.27■□□□□ 0.84
THUMPD2-202ENST00000403537 CXCL10P02778 98 aa20.27■□□□□ 0.84
THUMPD2-202ENST00000403537 RPLP2P05387 115 aaKnown RBP20.27■□□□□ 0.84
THUMPD2-202ENST00000403537 CYP3A4P08684 503 aa20.27■□□□□ 0.84
THUMPD2-202ENST00000403537 KCNJ6P48051 423 aa20.27■□□□□ 0.84
THUMPD2-202ENST00000403537 NONOQ15233 471 aaKnown RBP eCLIP20.27■□□□□ 0.84
THUMPD2-202ENST00000403537 TRIM71Q2Q1W2 868 aaKnown RBP20.27■□□□□ 0.84
THUMPD2-202ENST00000403537 CNKSR3Q6P9H4 555 aa20.27■□□□□ 0.84
THUMPD2-202ENST00000403537 GLG1Q92896 1179 aa20.27■□□□□ 0.84
THUMPD2-202ENST00000403537 RNPEPQ9H4A4 650 aa20.27■□□□□ 0.84
THUMPD2-202ENST00000403537 AZI2Q9H6S1 392 aa20.27■□□□□ 0.84
THUMPD2-202ENST00000403537 PKD2L1Q9P0L9 805 aa20.27■□□□□ 0.84
THUMPD2-202ENST00000403537 CCDC194A0A1B0GVG4 234 aa20.26■□□□□ 0.83
THUMPD2-202ENST00000403537 GRXCR1A8MXD5 290 aa20.26■□□□□ 0.83
THUMPD2-202ENST00000403537 TDP2O95551 362 aa20.26■□□□□ 0.83
THUMPD2-202ENST00000403537 LARP1BQ659C4 914 aaKnown RBP20.26■□□□□ 0.83
THUMPD2-202ENST00000403537 SLC28A3Q9HAS3 691 aa20.26■□□□□ 0.83
THUMPD2-202ENST00000403537 BRMS1Q9HCU9 246 aa20.26■□□□□ 0.83
THUMPD2-202ENST00000403537 LAMA2P24043 3122 aaKnown RBP20.26■□□□□ 0.83
THUMPD2-202ENST00000403537 IGLV3-22A0A075B6J6 115 aa20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 ABHD14A-ACY1A0A1B0GW23 586 aa20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 GSTTP1A0A1W2PQM5 241 aa20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 RSPH10B2B2RC85 870 aa20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 RSPH10BP0C881 870 aa20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 ARP10275 920 aa20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 THPOP40225 353 aa20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 ZNF200P98182 395 aaPredicted RBP20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 SETQ01105 290 aaPredicted RBP20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 ZNF618Q5T7W0 954 aa20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 TAF2Q6P1X5 1199 aa20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 TRIM50Q86XT4 487 aa20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 AGO4Q9HCK5 861 aaKnown RBP20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 SETD4Q9NVD3 440 aa20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 TCEAL9Q9UHQ7 104 aa20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 KIF3AQ9Y496 699 aa20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 TELO2Q9Y4R8 837 aa20.25■□□□□ 0.83
THUMPD2-202ENST00000403537 TANC1Q9C0D5 1861 aa20.24■□□□□ 0.83
THUMPD2-202ENST00000403537 TREHO43280 583 aa20.24■□□□□ 0.83
THUMPD2-202ENST00000403537 LGR5O75473 907 aa20.24■□□□□ 0.83
THUMPD2-202ENST00000403537 HSP90AA1P07900 732 aaKnown RBP20.24■□□□□ 0.83
THUMPD2-202ENST00000403537 FOSL2P15408 326 aa20.24■□□□□ 0.83
THUMPD2-202ENST00000403537 PBX2P40425 430 aa20.24■□□□□ 0.83
THUMPD2-202ENST00000403537 SLC26A2P50443 739 aa20.24■□□□□ 0.83
THUMPD2-202ENST00000403537 IKBKEQ14164 716 aa20.24■□□□□ 0.83
THUMPD2-202ENST00000403537 SAFBQ15424 915 aaKnown RBP eCLIP20.24■□□□□ 0.83
THUMPD2-202ENST00000403537 RSPH3Q86UC2 560 aa20.24■□□□□ 0.83
THUMPD2-202ENST00000403537 PLA2G4DQ86XP0 818 aa20.24■□□□□ 0.83
THUMPD2-202ENST00000403537 SLC17A8Q8NDX2 589 aa20.24■□□□□ 0.83
THUMPD2-202ENST00000403537 LENG9Q96B70 501 aa20.24■□□□□ 0.83
THUMPD2-202ENST00000403537 VPS37CA5D8V6 355 aaPredicted RBP20.23■□□□□ 0.83
THUMPD2-202ENST00000403537 RRN3P2A6NIE6 340 aa20.23■□□□□ 0.83
THUMPD2-202ENST00000403537 H3BQV1 296 aa20.23■□□□□ 0.83
THUMPD2-202ENST00000403537 SYT1P21579 422 aa20.23■□□□□ 0.83
THUMPD2-202ENST00000403537 ACTR2P61160 394 aa20.23■□□□□ 0.83
THUMPD2-202ENST00000403537 PPFIA1Q13136 1202 aa20.23■□□□□ 0.83
THUMPD2-202ENST00000403537 LETM2Q2VYF4 491 aa20.23■□□□□ 0.83
THUMPD2-202ENST00000403537 MCTP1Q6DN14 999 aa20.23■□□□□ 0.83
THUMPD2-202ENST00000403537 PLPPR4Q7Z2D5 763 aa20.23■□□□□ 0.83
THUMPD2-202ENST00000403537 RPAINQ86UA6 219 aa20.23■□□□□ 0.83
THUMPD2-202ENST00000403537 LMBR1Q8WVP7 490 aa20.23■□□□□ 0.83
THUMPD2-202ENST00000403537 GAS2L1Q99501 681 aaPredicted RBP20.23■□□□□ 0.83
THUMPD2-202ENST00000403537 TBC1D22BQ9NU19 505 aa20.23■□□□□ 0.83
THUMPD2-202ENST00000403537 SLC37A4O43826 429 aa20.22■□□□□ 0.83
THUMPD2-202ENST00000403537 NBNO60934 754 aa20.22■□□□□ 0.83
THUMPD2-202ENST00000403537 CIITAP33076 1130 aa20.22■□□□□ 0.83
THUMPD2-202ENST00000403537 ADAM17P78536 824 aa20.22■□□□□ 0.83
THUMPD2-202ENST00000403537 HIC1Q14526 733 aa20.22■□□□□ 0.83
THUMPD2-202ENST00000403537 GRIN2CQ14957 1233 aa20.22■□□□□ 0.83
THUMPD2-202ENST00000403537 PRR16Q569H4 304 aa20.22■□□□□ 0.83
THUMPD2-202ENST00000403537 TRAF7Q6Q0C0 670 aa20.22■□□□□ 0.83
THUMPD2-202ENST00000403537 NEK8Q86SG6 692 aa20.22■□□□□ 0.83
THUMPD2-202ENST00000403537 NOSTRINQ8IVI9 506 aa20.22■□□□□ 0.83
THUMPD2-202ENST00000403537 HERC6Q8IVU3 1022 aa20.22■□□□□ 0.83
THUMPD2-202ENST00000403537 MYLIPQ8WY64 445 aa20.22■□□□□ 0.83
THUMPD2-202ENST00000403537 GJA10Q969M2 543 aa20.22■□□□□ 0.83
THUMPD2-202ENST00000403537 NKX2-4Q9H2Z4 354 aa20.22■□□□□ 0.83
THUMPD2-202ENST00000403537 FOXP1Q9H334 677 aaPredicted RBP20.22■□□□□ 0.83
THUMPD2-202ENST00000403537 IPO5O00410 1097 aaKnown RBP20.21■□□□□ 0.83
THUMPD2-202ENST00000403537 U2AF2P26368 475 aaKnown RBP eCLIP20.21■□□□□ 0.83
THUMPD2-202ENST00000403537 USP11P51784 963 aa20.21■□□□□ 0.83
THUMPD2-202ENST00000403537 ITGB3BPQ13352 177 aaPredicted RBP20.21■□□□□ 0.83
THUMPD2-202ENST00000403537 GNL2Q13823 731 aaKnown RBP20.21■□□□□ 0.83
THUMPD2-202ENST00000403537 NBR1Q14596 966 aa20.21■□□□□ 0.83
THUMPD2-202ENST00000403537 GPNMBQ14956 572 aa20.21■□□□□ 0.83
THUMPD2-202ENST00000403537 FAM160B1Q5W0V3 765 aa20.21■□□□□ 0.83
THUMPD2-202ENST00000403537 PPP2R2DQ66LE6 453 aa20.21■□□□□ 0.83
THUMPD2-202ENST00000403537 FERMT3Q86UX7 667 aa20.21■□□□□ 0.83
THUMPD2-202ENST00000403537 MAFAQ8NHW3 353 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms