RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 KRT76Q01546 638 aa28.47■■■□□ 2.15
CPNE1-205ENST00000401607 C1orf186Q6ZWK4 172 aa28.47■■■□□ 2.15
CPNE1-205ENST00000401607 NOC3LQ8WTT2 800 aaKnown RBP28.47■■■□□ 2.15
CPNE1-205ENST00000401607 TBC1D7Q9P0N9 293 aa28.47■■■□□ 2.15
CPNE1-205ENST00000401607 SOWAHBA6NEL2 793 aa28.47■■■□□ 2.15
CPNE1-205ENST00000401607 LRRC8AQ8IWT6 810 aa28.47■■■□□ 2.15
CPNE1-205ENST00000401607 MYOCDQ8IZQ8 938 aa28.47■■■□□ 2.15
CPNE1-205ENST00000401607 CSGALNACT2Q8N6G5 542 aa28.47■■■□□ 2.15
CPNE1-205ENST00000401607 C2orf69Q8N8R5 385 aa28.47■■■□□ 2.15
CPNE1-205ENST00000401607 FAM133AQ8N9E0 248 aa28.47■■■□□ 2.15
CPNE1-205ENST00000401607 ZSWIM4Q9H7M6 989 aa28.47■■■□□ 2.15
CPNE1-205ENST00000401607 SAMM50Q9Y512 469 aa28.47■■■□□ 2.15
CPNE1-205ENST00000401607 LOXHD1Q8IVV2 1947 aa28.46■■■□□ 2.15
CPNE1-205ENST00000401607 RSPH10B2B2RC85 870 aa28.46■■■□□ 2.15
CPNE1-205ENST00000401607 POTEB2H3BUK9 544 aa28.46■■■□□ 2.15
CPNE1-205ENST00000401607 TEX33O43247 280 aa28.46■■■□□ 2.15
CPNE1-205ENST00000401607 RSPH10BP0C881 870 aa28.46■■■□□ 2.15
CPNE1-205ENST00000401607 CETPP11597 493 aa28.46■■■□□ 2.15
CPNE1-205ENST00000401607 COPB2P35606 906 aa28.46■■■□□ 2.15
CPNE1-205ENST00000401607 JAK3P52333 1124 aa28.46■■■□□ 2.15
CPNE1-205ENST00000401607 GSDMDP57764 484 aa28.46■■■□□ 2.15
CPNE1-205ENST00000401607 MKRN3Q13064 507 aaKnown RBP28.46■■■□□ 2.15
CPNE1-205ENST00000401607 CDHR1Q96JP9 859 aa28.46■■■□□ 2.15
CPNE1-205ENST00000401607 ZHX3Q9H4I2 956 aa28.46■■■□□ 2.15
CPNE1-205ENST00000401607 RTN4Q9NQC3 1192 aaKnown RBP28.46■■■□□ 2.15
CPNE1-205ENST00000401607 PYCARDQ9ULZ3 195 aa28.46■■■□□ 2.15
CPNE1-205ENST00000401607 WDR64B1ANS9 1081 aa28.45■■■□□ 2.15
CPNE1-205ENST00000401607 SPATA31C2B4DYI2 1134 aa28.45■■■□□ 2.15
CPNE1-205ENST00000401607 CYP2C8P10632 490 aa28.45■■■□□ 2.15
CPNE1-205ENST00000401607 SFNP31947 248 aa28.45■■■□□ 2.15
CPNE1-205ENST00000401607 GTF2A2P52657 109 aa28.45■■■□□ 2.15
CPNE1-205ENST00000401607 STXBP2Q15833 593 aa28.45■■■□□ 2.15
CPNE1-205ENST00000401607 SENP7Q9BQF6 1050 aa28.45■■■□□ 2.15
CPNE1-205ENST00000401607 PNMA3Q9UL41 463 aa28.45■■■□□ 2.15
CPNE1-205ENST00000401607 ZNF500O60304 480 aaPredicted RBP28.45■■■□□ 2.14
CPNE1-205ENST00000401607 LYPLA2O95372 231 aa28.45■■■□□ 2.14
CPNE1-205ENST00000401607 EDNRBP24530 442 aa28.45■■■□□ 2.14
CPNE1-205ENST00000401607 QARSP47897 775 aaKnown RBP28.45■■■□□ 2.14
CPNE1-205ENST00000401607 COPB1P53618 953 aaKnown RBP28.45■■■□□ 2.14
CPNE1-205ENST00000401607 GNPTABQ3T906 1256 aa28.45■■■□□ 2.14
CPNE1-205ENST00000401607 ZNF746Q6NUN9 644 aaPredicted RBP28.45■■■□□ 2.14
CPNE1-205ENST00000401607 SFR1Q86XK3 245 aa28.45■■■□□ 2.14
CPNE1-205ENST00000401607 BRI3BPQ8WY22 251 aa28.45■■■□□ 2.14
CPNE1-205ENST00000401607 NFASCO94856 1347 aa28.44■■■□□ 2.14
CPNE1-205ENST00000401607 CCL15-CCL14A0A0B4J2E2 113 aa28.44■■■□□ 2.14
CPNE1-205ENST00000401607 BTBD19C9JJ37 291 aa28.44■■■□□ 2.14
CPNE1-205ENST00000401607 EIF3JO75822 258 aaKnown RBP28.44■■■□□ 2.14
CPNE1-205ENST00000401607 CCL15Q16663 113 aa28.44■■■□□ 2.14
CPNE1-205ENST00000401607 UGCGQ16739 394 aa28.44■■■□□ 2.14
CPNE1-205ENST00000401607 ARMCX5Q6P1M9 558 aa28.44■■■□□ 2.14
CPNE1-205ENST00000401607 BCAS3Q9H6U6 928 aa28.44■■■□□ 2.14
CPNE1-205ENST00000401607 TAB2Q9NYJ8 693 aa28.44■■■□□ 2.14
CPNE1-205ENST00000401607 SLC45A1Q9Y2W3 748 aa28.44■■■□□ 2.14
CPNE1-205ENST00000401607 LRRC37A2A6NM11 1700 aa28.44■■■□□ 2.14
CPNE1-205ENST00000401607 EEF1GP26641 437 aaKnown RBP28.43■■■□□ 2.14
CPNE1-205ENST00000401607 ICAM3P32942 547 aa28.43■■■□□ 2.14
CPNE1-205ENST00000401607 ERVK-9P63128 1117 aa28.43■■■□□ 2.14
CPNE1-205ENST00000401607 ERVK-24P63145 666 aa28.43■■■□□ 2.14
CPNE1-205ENST00000401607 FOXR2Q6PJQ5 311 aa28.43■■■□□ 2.14
CPNE1-205ENST00000401607 RDM1Q8NG50 284 aa28.43■■■□□ 2.14
CPNE1-205ENST00000401607 SCFD1Q8WVM8 642 aa28.43■■■□□ 2.14
CPNE1-205ENST00000401607 TCEAL9Q9UHQ7 104 aa28.43■■■□□ 2.14
CPNE1-205ENST00000401607 PDHXO00330 501 aa28.42■■■□□ 2.14
CPNE1-205ENST00000401607 PBX1P40424 430 aa28.42■■■□□ 2.14
CPNE1-205ENST00000401607 LRRC63Q05C16 580 aa28.42■■■□□ 2.14
CPNE1-205ENST00000401607 FILIP1LQ4L180 1135 aa28.42■■■□□ 2.14
CPNE1-205ENST00000401607 ZCWPW2Q504Y3 356 aa28.42■■■□□ 2.14
CPNE1-205ENST00000401607 CST9Q5W186 159 aa28.42■■■□□ 2.14
CPNE1-205ENST00000401607 ANKRD20A12PQ8NF67 263 aa28.42■■■□□ 2.14
CPNE1-205ENST00000401607 POLD4Q9HCU8 107 aa28.42■■■□□ 2.14
CPNE1-205ENST00000401607 KCND2Q9NZV8 630 aa28.42■■■□□ 2.14
CPNE1-205ENST00000401607 TBCAO75347 108 aaKnown RBP28.42■■■□□ 2.14
CPNE1-205ENST00000401607 CLCN1P35523 988 aa28.42■■■□□ 2.14
CPNE1-205ENST00000401607 CASP5P51878 434 aa28.42■■■□□ 2.14
CPNE1-205ENST00000401607 TBX2Q13207 712 aaPredicted RBP28.42■■■□□ 2.14
CPNE1-205ENST00000401607 SPRYD7Q5W111 196 aa28.42■■■□□ 2.14
CPNE1-205ENST00000401607 GTF3C2Q8WUA4 911 aaPredicted RBP28.42■■■□□ 2.14
CPNE1-205ENST00000401607 EEF2KMTQ96G04 330 aa28.42■■■□□ 2.14
CPNE1-205ENST00000401607 FGD4Q96M96 766 aa28.42■■■□□ 2.14
CPNE1-205ENST00000401607 VPS16Q9H269 839 aa28.42■■■□□ 2.14
CPNE1-205ENST00000401607 DBR1Q9UK59 544 aaKnown RBP28.42■■■□□ 2.14
CPNE1-205ENST00000401607 DOCK5Q9H7D0 1870 aa28.41■■■□□ 2.14
CPNE1-205ENST00000401607 ARHGEF35A5YM69 484 aa28.41■■■□□ 2.14
CPNE1-205ENST00000401607 ITGBL1O95965 494 aaPredicted RBP28.41■■■□□ 2.14
CPNE1-205ENST00000401607 SPECC1LQ69YQ0 1117 aa28.41■■■□□ 2.14
CPNE1-205ENST00000401607 CREBRFQ8IUR6 639 aa28.41■■■□□ 2.14
CPNE1-205ENST00000401607 C4orf19Q8IY42 314 aa28.41■■■□□ 2.14
CPNE1-205ENST00000401607 CCDC150Q8NCX0 1101 aa28.41■■■□□ 2.14
CPNE1-205ENST00000401607 ZNF526Q8TF50 670 aaPredicted RBP28.41■■■□□ 2.14
CPNE1-205ENST00000401607 MROH8Q9H579 483 aa28.41■■■□□ 2.14
CPNE1-205ENST00000401607 TELO2Q9Y4R8 837 aa28.41■■■□□ 2.14
CPNE1-205ENST00000401607 COL4A3BPQ9Y5P4 624 aa28.41■■■□□ 2.14
CPNE1-205ENST00000401607 DNAJC25-GNG10A0A024R161 153 aa28.4■■■□□ 2.14
CPNE1-205ENST00000401607 PSMC5P62195 406 aa28.4■■■□□ 2.14
CPNE1-205ENST00000401607 CCZ1BP86790 482 aa28.4■■■□□ 2.14
CPNE1-205ENST00000401607 CCZ1P86791 482 aaPredicted RBP28.4■■■□□ 2.14
CPNE1-205ENST00000401607 EPM2AIP1Q7L775 607 aaPredicted RBP28.4■■■□□ 2.14
CPNE1-205ENST00000401607 ANKRD23Q86SG2 305 aa28.4■■■□□ 2.14
CPNE1-205ENST00000401607 SHCBP1Q8NEM2 672 aa28.4■■■□□ 2.14
CPNE1-205ENST00000401607 KIAA1524Q8TCG1 905 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms