RNA–Protein interactions for RNA: ENST00000399907.5

GRIK1-204, Transcript of glutamate ionotropic receptor kainate type subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GRIK1, Length 3,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1-204ENST00000399907 SP8Q8IXZ3 490 aa12.84□□□□□ -0.35
GRIK1-204ENST00000399907 CCDC43Q96MW1 224 aaKnown RBP12.84□□□□□ -0.35
GRIK1-204ENST00000399907 ZIM3Q96PE6 472 aa12.84□□□□□ -0.35
GRIK1-204ENST00000399907 GANQ9H2C0 597 aa12.84□□□□□ -0.35
GRIK1-204ENST00000399907 IKZF4Q9H2S9 585 aa12.84□□□□□ -0.35
GRIK1-204ENST00000399907 DNAJC18Q9H819 358 aa12.84□□□□□ -0.35
GRIK1-204ENST00000399907 GRID2IPA4D2P6 1211 aa12.83□□□□□ -0.35
GRIK1-204ENST00000399907 RSPH10B2B2RC85 870 aa12.83□□□□□ -0.35
GRIK1-204ENST00000399907 HSF2BPO75031 334 aa12.83□□□□□ -0.35
GRIK1-204ENST00000399907 RSPH10BP0C881 870 aa12.83□□□□□ -0.35
GRIK1-204ENST00000399907 MYBP10242 640 aa12.83□□□□□ -0.35
GRIK1-204ENST00000399907 GCFC2P16383 781 aaKnown RBP12.83□□□□□ -0.35
GRIK1-204ENST00000399907 ATP1A2P50993 1020 aa12.83□□□□□ -0.35
GRIK1-204ENST00000399907 GNGT1P63211 74 aa12.83□□□□□ -0.35
GRIK1-204ENST00000399907 PTK2Q05397 1052 aa12.83□□□□□ -0.35
GRIK1-204ENST00000399907 GPATCH4Q5T3I0 446 aaKnown RBP12.83□□□□□ -0.35
GRIK1-204ENST00000399907 TCERG1LQ5VWI1 586 aa12.83□□□□□ -0.35
GRIK1-204ENST00000399907 CATSPER3Q86XQ3 398 aa12.83□□□□□ -0.35
GRIK1-204ENST00000399907 RNF10Q8N5U6 811 aaKnown RBP12.83□□□□□ -0.35
GRIK1-204ENST00000399907 EDEM3Q9BZQ6 932 aa12.83□□□□□ -0.35
GRIK1-204ENST00000399907 KCNQ5Q9NR82 932 aa12.83□□□□□ -0.35
GRIK1-204ENST00000399907 EEF2P13639 858 aaKnown RBP12.83□□□□□ -0.36
GRIK1-204ENST00000399907 IRAK1P51617 712 aa12.83□□□□□ -0.36
GRIK1-204ENST00000399907 SLC12A3P55017 1021 aa12.83□□□□□ -0.36
GRIK1-204ENST00000399907 SEPT2Q15019 361 aa12.83□□□□□ -0.36
GRIK1-204ENST00000399907 REEP2Q9BRK0 252 aa12.83□□□□□ -0.36
GRIK1-204ENST00000399907 CAPS2Q9BXY5 557 aa12.83□□□□□ -0.36
GRIK1-204ENST00000399907 TSPYL1Q9H0U9 437 aa12.83□□□□□ -0.36
GRIK1-204ENST00000399907 DHX36Q9H2U1 1008 aaKnown RBP12.83□□□□□ -0.36
GRIK1-204ENST00000399907 KCNMB3Q9NPA1 279 aa12.83□□□□□ -0.36
GRIK1-204ENST00000399907 CETN3O15182 167 aa12.83□□□□□ -0.36
GRIK1-204ENST00000399907 HLA-DOAP06340 250 aa12.83□□□□□ -0.36
GRIK1-204ENST00000399907 IKQ13123 557 aaPredicted RBP12.83□□□□□ -0.36
GRIK1-204ENST00000399907 EMBQ6PCB8 327 aa12.83□□□□□ -0.36
GRIK1-204ENST00000399907 SWAP70Q9UH65 585 aa12.83□□□□□ -0.36
GRIK1-204ENST00000399907 KCNK3O14649 394 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 NOP2P46087 812 aaKnown RBP12.82□□□□□ -0.36
GRIK1-204ENST00000399907 HYIQ5T013 277 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 MEI1Q5TIA1 1274 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 GJB7Q6PEY0 223 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 ZNF571Q7Z3V5 609 aaPredicted RBP12.82□□□□□ -0.36
GRIK1-204ENST00000399907 SPAG5Q96R06 1193 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 TMX4Q9H1E5 349 aaPredicted RBP12.82□□□□□ -0.36
GRIK1-204ENST00000399907 ZNF219Q9P2Y4 722 aaPredicted RBP12.82□□□□□ -0.36
GRIK1-204ENST00000399907 AJAP1Q9UKB5 411 aaPredicted RBP12.82□□□□□ -0.36
GRIK1-204ENST00000399907 CLIC2O15247 247 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 HOXA13P31271 388 aaPredicted RBP12.82□□□□□ -0.36
GRIK1-204ENST00000399907 KCNA1Q09470 495 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 MSL1Q68DK7 614 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 CASKIN2Q8WXE0 1202 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 ZNF622Q969S3 477 aaKnown RBP eCLIP12.82□□□□□ -0.36
GRIK1-204ENST00000399907 COA1Q9GZY4 146 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 NUCKS1Q9H1E3 243 aaKnown RBP12.82□□□□□ -0.36
GRIK1-204ENST00000399907 LUC7LQ9NQ29 371 aaKnown RBP12.82□□□□□ -0.36
GRIK1-204ENST00000399907 UBR3Q6ZT12 1888 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 SFI1A8K8P3 1242 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 SHOX2O60902 331 aaPredicted RBP12.82□□□□□ -0.36
GRIK1-204ENST00000399907 GDF11O95390 407 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 GNA14O95837 355 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 HOXD13P35453 343 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 ARHGAP4P98171 946 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 PDCLQ13371 301 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 GIT2Q14161 759 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 SLFN13Q68D06 897 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 IFT20Q8IY31 132 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 CYP2W1Q8TAV3 490 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 SYN2Q92777 582 aaPredicted RBP12.82□□□□□ -0.36
GRIK1-204ENST00000399907 SH3GL2Q99962 352 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 TSKSQ9UJT2 592 aa12.82□□□□□ -0.36
GRIK1-204ENST00000399907 GRIN2DO15399 1336 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 GOLGA8KD6RF30 607 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 MEIS2O14770 477 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 RAD51CO43502 376 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 CASP4P49662 377 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 PPFIA1Q13136 1202 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 APOBEC3HQ6NTF7 200 aaKnown RBP12.81□□□□□ -0.36
GRIK1-204ENST00000399907 COL23A1Q86Y22 540 aaPredicted RBP12.81□□□□□ -0.36
GRIK1-204ENST00000399907 ARMCX3Q9UH62 379 aaPredicted RBP12.81□□□□□ -0.36
GRIK1-204ENST00000399907 PCDHGC5Q9Y5F6 944 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 FAM86B1E9PN63 330 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 OPA1O60313 960 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 FAM86B2P0C5J1 330 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 UCHL3P15374 230 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 RBM5P52756 815 aaKnown RBP eCLIP12.81□□□□□ -0.36
GRIK1-204ENST00000399907 KIAA0825Q8IV33 1275 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 RBM46Q8TBY0 533 aaKnown RBP12.81□□□□□ -0.36
GRIK1-204ENST00000399907 BCAS4Q8TDM0 211 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 CAVIN3Q969G5 261 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 INPP4AQ96PE3 977 aaPredicted RBP12.81□□□□□ -0.36
GRIK1-204ENST00000399907 AP1M1Q9BXS5 423 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 DBNDD1Q9H9R9 158 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 SAMM50Q9Y512 469 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 DDTLA6NHG4 134 aaPredicted RBP12.81□□□□□ -0.36
GRIK1-204ENST00000399907 AKAP3O75969 853 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 SPIRE1Q08AE8 756 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 NLGN1Q8N2Q7 840 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 ETNPPLQ8TBG4 499 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 BHMT2Q9H2M3 363 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 GDF3Q9NR23 364 aa12.81□□□□□ -0.36
GRIK1-204ENST00000399907 AIPL1Q9NZN9 384 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms