RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 PI4K2BG5E9Z4 385 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 USP17L24Q0WX57 530 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 USP17L6PQ6QN14 398 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 SDCCAG3Q96C92 435 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 STAT3P40763 770 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 BASP1P80723 227 aaKnown RBP10.08□□□□□ -0.8
ATL3-201ENST00000398868 PPP6R3Q5H9R7 873 aaPredicted RBP10.08□□□□□ -0.8
ATL3-201ENST00000398868 MAP3K21Q5TCX8 1036 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 SRGAP1Q7Z6B7 1085 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 MMTAG2Q9BU76 263 aaKnown RBP10.08□□□□□ -0.8
ATL3-201ENST00000398868 PCCAP05165 728 aaPredicted RBP10.08□□□□□ -0.8
ATL3-201ENST00000398868 IQCB1Q15051 598 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 SYCE1Q8N0S2 351 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 HNRNPCP07910 306 aaKnown RBP eCLIP10.08□□□□□ -0.8
ATL3-201ENST00000398868 SF3B3Q15393 1217 aaKnown RBP10.08□□□□□ -0.8
ATL3-201ENST00000398868 NBPF10Q6P3W6 841 aaKnown RBP10.08□□□□□ -0.8
ATL3-201ENST00000398868 PODNQ7Z5L7 613 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 TMCO5AQ8N6Q1 288 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 SMYD3Q9H7B4 428 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 PIH1D3Q9NQM4 214 aaKnown RBP10.08□□□□□ -0.8
ATL3-201ENST00000398868 SUPT3HO75486 399 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 NCF2P19878 526 aaPredicted RBP10.08□□□□□ -0.8
ATL3-201ENST00000398868 NSFP46459 744 aaKnown RBP10.08□□□□□ -0.8
ATL3-201ENST00000398868 MKRN4PQ13434 485 aaPredicted RBP10.08□□□□□ -0.8
ATL3-201ENST00000398868 SEPT2Q15019 361 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 EXOC3L4Q17RC7 722 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 MUM1L1Q5H9M0 696 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 CLEC10AQ8IUN9 316 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 SIX6OS1Q8N1H7 587 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 ARHGEF1Q92888 912 aaKnown RBP10.08□□□□□ -0.8
ATL3-201ENST00000398868 CNOT6LQ96LI5 555 aaKnown RBP10.08□□□□□ -0.8
ATL3-201ENST00000398868 CEP19Q96LK0 163 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 ADD3Q9UEY8 706 aaKnown RBP10.08□□□□□ -0.8
ATL3-201ENST00000398868 MAFGO15525 162 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 CYP2B6P20813 491 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 GRAMD1BQ3KR37 738 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 MMP19Q99542 508 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 RPF1Q9H9Y2 349 aaKnown RBP10.07□□□□□ -0.8
ATL3-201ENST00000398868 PTPREP23469 700 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 LONP1P36776 959 aaKnown RBP10.07□□□□□ -0.8
ATL3-201ENST00000398868 PRPSAP1Q14558 356 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 DDX53Q86TM3 631 aaKnown RBP10.07□□□□□ -0.8
ATL3-201ENST00000398868 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.07□□□□□ -0.8
ATL3-201ENST00000398868 HAUS2Q9NVX0 235 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 PI4KBQ9UBF8 816 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 MED23Q9ULK4 1368 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 ABCC4O15439 1325 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 CCDC78A2IDD5 438 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 NPR1P16066 1061 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 RNF219Q5W0B1 726 aaPredicted RBP10.07□□□□□ -0.8
ATL3-201ENST00000398868 FGD4Q96M96 766 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 TTC25Q96NG3 672 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 GLT8D2Q9H1C3 349 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 FBXL5Q9UKA1 691 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 ZFYVE9O95405 1425 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 DARS2Q6PI48 645 aaKnown RBP10.07□□□□□ -0.8
ATL3-201ENST00000398868 TMTC3Q6ZXV5 915 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 IFNLR1Q8IU57 520 aaPredicted RBP10.07□□□□□ -0.8
ATL3-201ENST00000398868 CNPY4Q8N129 248 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 MASTLQ96GX5 879 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 TMEM106CQ9BVX2 250 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 ZSWIM5Q9P217 1185 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.07□□□□□ -0.8
ATL3-201ENST00000398868 HYOU1Q9Y4L1 999 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 CTNND1O60716 968 aaKnown RBP10.07□□□□□ -0.8
ATL3-201ENST00000398868 ZRANB2O95218 330 aaKnown RBP eCLIP10.07□□□□□ -0.8
ATL3-201ENST00000398868 YWHAEP62258 255 aaKnown RBP10.07□□□□□ -0.8
ATL3-201ENST00000398868 ESRRGP62508 458 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 ARHGAP4P98171 946 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 CCDC85BQ15834 202 aaPredicted RBP10.07□□□□□ -0.8
ATL3-201ENST00000398868 MCTP2Q6DN12 878 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 RINT1Q6NUQ1 792 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 GSPT2Q8IYD1 628 aaKnown RBP10.07□□□□□ -0.8
ATL3-201ENST00000398868 MLKLQ8NB16 471 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 MSTO1Q9BUK6 570 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 BCAP29Q9UHQ4 241 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 SUFUQ9UMX1 484 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 S100BP04271 92 aaPredicted RBP10.07□□□□□ -0.8
ATL3-201ENST00000398868 PCYT1AP49585 367 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 CLCN6P51797 869 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 PSMC1P62191 440 aaKnown RBP10.07□□□□□ -0.8
ATL3-201ENST00000398868 LMBRD2Q68DH5 695 aaPredicted RBP10.07□□□□□ -0.8
ATL3-201ENST00000398868 KRT80Q6KB66 452 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 MAML1Q92585 1016 aa10.07□□□□□ -0.8
ATL3-201ENST00000398868 PDIA3P30101 505 aaKnown RBP10.06□□□□□ -0.8
ATL3-201ENST00000398868 CELF1Q92879 486 aaKnown RBP10.06□□□□□ -0.8
ATL3-201ENST00000398868 PPP1R36Q96LQ0 422 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 RMDN3Q96TC7 470 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 GPBP1L1Q9HC44 474 aaPredicted RBP10.06□□□□□ -0.8
ATL3-201ENST00000398868 FTCDO95954 541 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 ADORA2BP29275 332 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 MAPK4P31152 587 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 USP14P54578 494 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 GPSM2P81274 684 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 HSP90AA5PQ58FG0 334 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 TCP11X2Q5H9J9 407 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 ZNF507Q8TCN5 953 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 BAG5Q9UL15 447 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 UGGT1Q9NYU2 1555 aa10.06□□□□□ -0.8
ATL3-201ENST00000398868 TADA3O75528 432 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms