RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 ERO1BQ86YB8 467 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 C2orf69Q8N8R5 385 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 LARP4BQ92615 738 aaKnown RBP14.54□□□□□ -0.08
TOP3B-202ENST00000398793 LPAR1Q92633 364 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 MTMR8Q96EF0 704 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 KIFC3Q9BVG8 833 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 TEX13BQ9BXU2 312 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 ARFGAP3Q9NP61 516 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 TAB2Q9NYJ8 693 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 PDHXO00330 501 aa14.53□□□□□ -0.08
TOP3B-202ENST00000398793 LONP1P36776 959 aaKnown RBP14.53□□□□□ -0.08
TOP3B-202ENST00000398793 TRAPPC10P48553 1259 aa14.53□□□□□ -0.08
TOP3B-202ENST00000398793 IGBP1P78318 339 aa14.53□□□□□ -0.08
TOP3B-202ENST00000398793 KCNA1Q09470 495 aa14.53□□□□□ -0.08
TOP3B-202ENST00000398793 RPAINQ86UA6 219 aa14.53□□□□□ -0.08
TOP3B-202ENST00000398793 FBXO16Q8IX29 292 aaPredicted RBP14.53□□□□□ -0.08
TOP3B-202ENST00000398793 ZNF579Q8NAF0 562 aaKnown RBP14.53□□□□□ -0.08
TOP3B-202ENST00000398793 CEP89Q96ST8 783 aa14.53□□□□□ -0.08
TOP3B-202ENST00000398793 CTAGE5O15320 804 aa14.53□□□□□ -0.08
TOP3B-202ENST00000398793 LY6KQ17RY6 165 aa14.53□□□□□ -0.08
TOP3B-202ENST00000398793 TRIM47Q96LD4 638 aa14.53□□□□□ -0.08
TOP3B-202ENST00000398793 MOV10L1Q9BXT6 1211 aaKnown RBP14.53□□□□□ -0.08
TOP3B-202ENST00000398793 UNC45AQ9H3U1 944 aa14.53□□□□□ -0.08
TOP3B-202ENST00000398793 POTEB2H3BUK9 544 aa14.52□□□□□ -0.08
TOP3B-202ENST00000398793 CLIC2O15247 247 aa14.52□□□□□ -0.08
TOP3B-202ENST00000398793 CSDE1O75534 798 aaKnown RBP14.52□□□□□ -0.08
TOP3B-202ENST00000398793 CLK2P49760 499 aaKnown RBP14.52□□□□□ -0.08
TOP3B-202ENST00000398793 GALNT17Q6IS24 598 aa14.52□□□□□ -0.08
TOP3B-202ENST00000398793 MTMR9Q96QG7 549 aa14.52□□□□□ -0.08
TOP3B-202ENST00000398793 EIF2AK1Q9BQI3 630 aaKnown RBP14.52□□□□□ -0.08
TOP3B-202ENST00000398793 NAT10Q9H0A0 1025 aaKnown RBP14.52□□□□□ -0.08
TOP3B-202ENST00000398793 PDGFCQ9NRA1 345 aa14.52□□□□□ -0.08
TOP3B-202ENST00000398793 CCDC189A1A4V9 331 aa14.52□□□□□ -0.08
TOP3B-202ENST00000398793 IQCB1Q15051 598 aa14.52□□□□□ -0.08
TOP3B-202ENST00000398793 E4F1Q66K89 784 aaPredicted RBP14.52□□□□□ -0.08
TOP3B-202ENST00000398793 CYP4F22Q6NT55 531 aa14.52□□□□□ -0.08
TOP3B-202ENST00000398793 MIER3Q7Z3K6 550 aa14.52□□□□□ -0.08
TOP3B-202ENST00000398793 PNMA8AQ86V59 439 aaPredicted RBP14.52□□□□□ -0.08
TOP3B-202ENST00000398793 DAGLBQ8NCG7 672 aa14.52□□□□□ -0.08
TOP3B-202ENST00000398793 NELFBQ8WX92 580 aa14.52□□□□□ -0.08
TOP3B-202ENST00000398793 SGSM3Q96HU1 749 aa14.52□□□□□ -0.08
TOP3B-202ENST00000398793 MED15Q96RN5 788 aa14.52□□□□□ -0.08
TOP3B-202ENST00000398793 RAB34Q9BZG1 259 aa14.52□□□□□ -0.08
TOP3B-202ENST00000398793 HOXC10Q9NYD6 342 aa14.52□□□□□ -0.08
TOP3B-202ENST00000398793 RGPD3A6NKT7 1758 aaPredicted RBP14.52□□□□□ -0.09
TOP3B-202ENST00000398793 RGPD4Q7Z3J3 1758 aa14.52□□□□□ -0.09
TOP3B-202ENST00000398793 BTBD19C9JJ37 291 aa14.52□□□□□ -0.09
TOP3B-202ENST00000398793 UBASH3AP57075 661 aa14.52□□□□□ -0.09
TOP3B-202ENST00000398793 ZC2HC1CQ53FD0 456 aaPredicted RBP14.52□□□□□ -0.09
TOP3B-202ENST00000398793 PDXDC2PQ6P474 469 aa14.52□□□□□ -0.09
TOP3B-202ENST00000398793 BLOC1S4Q9NUP1 217 aa14.52□□□□□ -0.09
TOP3B-202ENST00000398793 TADA3O75528 432 aa14.51□□□□□ -0.09
TOP3B-202ENST00000398793 PRPF6O94906 941 aaKnown RBP14.51□□□□□ -0.09
TOP3B-202ENST00000398793 PLA2G4BP0C869 781 aa14.51□□□□□ -0.09
TOP3B-202ENST00000398793 MDM2Q00987 491 aaPredicted RBP14.51□□□□□ -0.09
TOP3B-202ENST00000398793 BTNL9Q6UXG8 535 aa14.51□□□□□ -0.09
TOP3B-202ENST00000398793 LENG9Q96B70 501 aa14.51□□□□□ -0.09
TOP3B-202ENST00000398793 TEX33O43247 280 aa14.51□□□□□ -0.09
TOP3B-202ENST00000398793 BMP15O95972 392 aa14.51□□□□□ -0.09
TOP3B-202ENST00000398793 HARSP12081 509 aaKnown RBP14.51□□□□□ -0.09
TOP3B-202ENST00000398793 ITGB3BPQ13352 177 aaPredicted RBP14.51□□□□□ -0.09
TOP3B-202ENST00000398793 UGCGQ16739 394 aa14.51□□□□□ -0.09
TOP3B-202ENST00000398793 SWSAP1Q6NVH7 229 aa14.51□□□□□ -0.09
TOP3B-202ENST00000398793 FAM43BQ6ZT52 329 aaPredicted RBP14.51□□□□□ -0.09
TOP3B-202ENST00000398793 CCDC155Q8N6L0 562 aa14.51□□□□□ -0.09
TOP3B-202ENST00000398793 MRFAP1L1Q96HT8 127 aa14.51□□□□□ -0.09
TOP3B-202ENST00000398793 CRACR2AQ9BSW2 395 aa14.51□□□□□ -0.09
TOP3B-202ENST00000398793 SRRTQ9BXP5 876 aaKnown RBP14.51□□□□□ -0.09
TOP3B-202ENST00000398793 SPATC1LQ9H0A9 340 aa14.51□□□□□ -0.09
TOP3B-202ENST00000398793 TISP43B9A030 160 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 TPM1P09493 284 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 SREBF1P36956 1147 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 PGM5Q15124 567 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 PDCD2LQ9BRP1 358 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 RUSC1Q9BVN2 902 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 ESYT2A0FGR8 921 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 ADKP55263 362 aaKnown RBP14.5□□□□□ -0.09
TOP3B-202ENST00000398793 FANCCQ00597 558 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 TADA2BQ86TJ2 420 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 BRI3BPQ8WY22 251 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 LXNQ9BS40 222 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 ACAD9Q9H845 621 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 TKFCQ3LXA3 575 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 EFCAB13Q8IY85 973 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 TRIM9Q9C026 710 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 SUGCTQ9HAC7 445 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 RBPJLQ9UBG7 517 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 ZNF112Q9UJU3 913 aa14.5□□□□□ -0.09
TOP3B-202ENST00000398793 EFCAB8A8MWE9 144 aa14.49□□□□□ -0.09
TOP3B-202ENST00000398793 NMT1P30419 496 aaKnown RBP14.49□□□□□ -0.09
TOP3B-202ENST00000398793 CASP5P51878 434 aa14.49□□□□□ -0.09
TOP3B-202ENST00000398793 APBA1Q02410 837 aa14.49□□□□□ -0.09
TOP3B-202ENST00000398793 ARL6IP4Q66PJ3 421 aaKnown RBP14.49□□□□□ -0.09
TOP3B-202ENST00000398793 NLRX1Q86UT6 975 aa14.49□□□□□ -0.09
TOP3B-202ENST00000398793 CDR2LQ86X02 465 aaPredicted RBP14.49□□□□□ -0.09
TOP3B-202ENST00000398793 MYCT1Q8N699 235 aa14.49□□□□□ -0.09
TOP3B-202ENST00000398793 FUT8Q9BYC5 575 aa14.49□□□□□ -0.09
TOP3B-202ENST00000398793 PXMP2Q9NR77 195 aa14.49□□□□□ -0.09
TOP3B-202ENST00000398793 CYP39A1Q9NYL5 469 aa14.49□□□□□ -0.09
TOP3B-202ENST00000398793 DNM3Q9UQ16 869 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms