RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 CHP1Q99653 195 aa28.47■■■□□ 2.15
SHARPIN-202ENST00000398712 OLFML3Q9NRN5 406 aa28.47■■■□□ 2.15
SHARPIN-202ENST00000398712 KCNH7Q9NS40 1196 aa28.47■■■□□ 2.15
SHARPIN-202ENST00000398712 CETN3O15182 167 aa28.46■■■□□ 2.15
SHARPIN-202ENST00000398712 NDUFA10O95299 355 aa28.46■■■□□ 2.15
SHARPIN-202ENST00000398712 BMT2Q1RMZ1 405 aa28.46■■■□□ 2.15
SHARPIN-202ENST00000398712 TKFCQ3LXA3 575 aa28.46■■■□□ 2.15
SHARPIN-202ENST00000398712 ARHGAP29Q52LW3 1261 aa28.46■■■□□ 2.15
SHARPIN-202ENST00000398712 IL31RAQ8NI17 732 aa28.46■■■□□ 2.15
SHARPIN-202ENST00000398712 ANKRD7Q92527 254 aa28.46■■■□□ 2.15
SHARPIN-202ENST00000398712 JADE2Q9NQC1 790 aa28.46■■■□□ 2.15
SHARPIN-202ENST00000398712 TRAF3IP3Q9Y228 551 aa28.46■■■□□ 2.15
SHARPIN-202ENST00000398712 PHIPQ8WWQ0 1821 aa28.46■■■□□ 2.15
SHARPIN-202ENST00000398712 CALUO43852 315 aaPredicted RBP28.45■■■□□ 2.15
SHARPIN-202ENST00000398712 FAM13AO94988 1023 aa28.45■■■□□ 2.15
SHARPIN-202ENST00000398712 CASP5P51878 434 aa28.45■■■□□ 2.15
SHARPIN-202ENST00000398712 RPS6P62753 249 aaKnown RBP28.45■■■□□ 2.15
SHARPIN-202ENST00000398712 NCBP1Q09161 790 aaKnown RBP28.45■■■□□ 2.15
SHARPIN-202ENST00000398712 PRAMEF18Q5VWM3 479 aa28.45■■■□□ 2.15
SHARPIN-202ENST00000398712 WDR59Q6PJI9 974 aa28.45■■■□□ 2.15
SHARPIN-202ENST00000398712 C1orf186Q6ZWK4 172 aa28.45■■■□□ 2.15
SHARPIN-202ENST00000398712 ATG4CQ96DT6 458 aa28.45■■■□□ 2.15
SHARPIN-202ENST00000398712 WDR24Q96S15 920 aa28.45■■■□□ 2.15
SHARPIN-202ENST00000398712 ZHX2Q9Y6X8 837 aa28.45■■■□□ 2.15
SHARPIN-202ENST00000398712 PDXKO00764 312 aa28.45■■■□□ 2.14
SHARPIN-202ENST00000398712 URI1O94763 535 aaPredicted RBP28.45■■■□□ 2.14
SHARPIN-202ENST00000398712 CDK17Q00537 523 aa28.45■■■□□ 2.14
SHARPIN-202ENST00000398712 ADAM9Q13443 819 aa28.45■■■□□ 2.14
SHARPIN-202ENST00000398712 RNF207Q6ZRF8 634 aa28.45■■■□□ 2.14
SHARPIN-202ENST00000398712 MIER3Q7Z3K6 550 aa28.45■■■□□ 2.14
SHARPIN-202ENST00000398712 KLRG1Q96E93 195 aa28.45■■■□□ 2.14
SHARPIN-202ENST00000398712 FAM184BQ9ULE4 1060 aa28.45■■■□□ 2.14
SHARPIN-202ENST00000398712 RSPH10B2B2RC85 870 aa28.44■■■□□ 2.14
SHARPIN-202ENST00000398712 FANCGO15287 622 aa28.44■■■□□ 2.14
SHARPIN-202ENST00000398712 RSPH10BP0C881 870 aa28.44■■■□□ 2.14
SHARPIN-202ENST00000398712 CYLC1P35663 651 aaPredicted RBP28.44■■■□□ 2.14
SHARPIN-202ENST00000398712 OAZ1P54368 228 aa28.44■■■□□ 2.14
SHARPIN-202ENST00000398712 SUPT20HL1Q3ZLR7 823 aa28.44■■■□□ 2.14
SHARPIN-202ENST00000398712 NOL9Q5SY16 702 aaKnown RBP28.44■■■□□ 2.14
SHARPIN-202ENST00000398712 LXNQ9BS40 222 aa28.44■■■□□ 2.14
SHARPIN-202ENST00000398712 AGO4Q9HCK5 861 aaKnown RBP28.44■■■□□ 2.14
SHARPIN-202ENST00000398712 PGM5Q15124 567 aa28.43■■■□□ 2.14
SHARPIN-202ENST00000398712 TRIM59Q8IWR1 403 aa28.43■■■□□ 2.14
SHARPIN-202ENST00000398712 CCDC170Q8IYT3 715 aa28.43■■■□□ 2.14
SHARPIN-202ENST00000398712 TAAR1Q96RJ0 339 aa28.43■■■□□ 2.14
SHARPIN-202ENST00000398712 EDEM3Q9BZQ6 932 aa28.43■■■□□ 2.14
SHARPIN-202ENST00000398712 MMRN2Q9H8L6 949 aa28.43■■■□□ 2.14
SHARPIN-202ENST00000398712 SEL1LQ9UBV2 794 aa28.43■■■□□ 2.14
SHARPIN-202ENST00000398712 RRP9O43818 475 aaKnown RBP28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 GCNT3O95395 438 aa28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 MYBP10242 640 aa28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 NR2F2P24468 414 aa28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 HMGCS2P54868 508 aa28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 MRPS9P82933 396 aaKnown RBP28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 MTMR1Q13613 665 aa28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 TYW1Q9NV66 732 aaKnown RBP28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 ODF2LQ9ULJ1 636 aa28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 RLFQ13129 1914 aa28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 COL11A1P12107 1806 aaPredicted RBP28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 EIF3DO15371 548 aaKnown RBP eCLIP28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 DSG3P32926 999 aa28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 KRT83P78385 493 aa28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 NEK11Q8NG66 645 aa28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 PARVGQ9HBI0 331 aa28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 FAM207AQ9NSI2 230 aaPredicted RBP28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 RNF146Q9NTX7 359 aa28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 TBC1D22BQ9NU19 505 aa28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 MYO1AQ9UBC5 1043 aa28.42■■■□□ 2.14
SHARPIN-202ENST00000398712 DDX39AO00148 427 aaKnown RBP28.41■■■□□ 2.14
SHARPIN-202ENST00000398712 PRPF6O94906 941 aaKnown RBP28.41■■■□□ 2.14
SHARPIN-202ENST00000398712 EIF2AK2P19525 551 aaKnown RBP28.41■■■□□ 2.14
SHARPIN-202ENST00000398712 HNRNPH3P31942 346 aaKnown RBP28.41■■■□□ 2.14
SHARPIN-202ENST00000398712 EPS15P42566 896 aa28.41■■■□□ 2.14
SHARPIN-202ENST00000398712 XRRA1Q6P2D8 792 aa28.41■■■□□ 2.14
SHARPIN-202ENST00000398712 NSMFQ6X4W1 530 aa28.41■■■□□ 2.14
SHARPIN-202ENST00000398712 MYCT1Q8N699 235 aa28.41■■■□□ 2.14
SHARPIN-202ENST00000398712 RMDN3Q96TC7 470 aa28.41■■■□□ 2.14
SHARPIN-202ENST00000398712 PXMP2Q9NR77 195 aa28.41■■■□□ 2.14
SHARPIN-202ENST00000398712 TMOD4Q9NZQ9 345 aa28.41■■■□□ 2.14
SHARPIN-202ENST00000398712 SSC5DA1L4H1 1573 aa28.41■■■□□ 2.14
SHARPIN-202ENST00000398712 DHX15O43143 795 aaKnown RBP28.4■■■□□ 2.14
SHARPIN-202ENST00000398712 P4HBP07237 508 aaKnown RBP28.4■■■□□ 2.14
SHARPIN-202ENST00000398712 RPL13P26373 211 aaKnown RBP28.4■■■□□ 2.14
SHARPIN-202ENST00000398712 HIRAP54198 1017 aaPredicted RBP28.4■■■□□ 2.14
SHARPIN-202ENST00000398712 BANK1Q8NDB2 785 aa28.4■■■□□ 2.14
SHARPIN-202ENST00000398712 REPS2Q8NFH8 660 aa28.4■■■□□ 2.14
SHARPIN-202ENST00000398712 PKD2L1Q9P0L9 805 aa28.4■■■□□ 2.14
SHARPIN-202ENST00000398712 WRAP73Q9P2S5 460 aaPredicted RBP28.4■■■□□ 2.14
SHARPIN-202ENST00000398712 ADAMTS5Q9UNA0 930 aa28.4■■■□□ 2.14
SHARPIN-202ENST00000398712 SBF1O95248 1867 aa28.4■■■□□ 2.14
SHARPIN-202ENST00000398712 ARHGEF35A5YM69 484 aa28.39■■■□□ 2.14
SHARPIN-202ENST00000398712 IPO7O95373 1038 aaKnown RBP28.39■■■□□ 2.14
SHARPIN-202ENST00000398712 HOXD13P35453 343 aa28.39■■■□□ 2.14
SHARPIN-202ENST00000398712 PPP2R3AQ06190 1150 aa28.39■■■□□ 2.14
SHARPIN-202ENST00000398712 COG2Q14746 738 aa28.39■■■□□ 2.14
SHARPIN-202ENST00000398712 ARHGEF16Q5VV41 709 aa28.39■■■□□ 2.14
SHARPIN-202ENST00000398712 STXBP4Q6ZWJ1 553 aa28.39■■■□□ 2.14
SHARPIN-202ENST00000398712 FRMD5Q7Z6J6 570 aa28.39■■■□□ 2.14
SHARPIN-202ENST00000398712 PDCD2LQ9BRP1 358 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms