RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 XPOTO43592 962 aaKnown RBP15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 FTCDO95954 541 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 MAPK4P31152 587 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 PEX3P56589 373 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 ZNF543Q08ER8 600 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 PDIA5Q14554 519 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 CEP72Q9P209 647 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 ZNF148Q9UQR1 794 aa15.45■□□□□ 0.06
PCDHGA11-201ENST00000398587 MROH1Q8NDA8 1641 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 WDR64B1ANS9 1081 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 IRX5P78411 483 aaPredicted RBP15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 BFSP1Q12934 665 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 INTS5Q6P9B9 1019 aaKnown RBP15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 MCPH1Q8NEM0 835 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 ANAPC4Q9UJX5 808 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 DAAM1Q9Y4D1 1078 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 SLIT1O75093 1534 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 K7ERI5 159 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 NR3C1P04150 777 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 HAUS1Q96CS2 278 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 SEL1LQ9UBV2 794 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 FBXO40Q9UH90 709 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 GNGT1P63211 74 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 KRT76Q01546 638 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 LMNB2Q03252 620 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 CASC4Q6P4E1 433 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 MAP3K14Q99558 947 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 PARD6BQ9BYG5 372 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 FAM205CA6NFA0 338 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 ZNF233A6NK53 670 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 FDX1P10109 184 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 ATF2P15336 505 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 HHIPL2Q6UWX4 724 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 CEP57Q86XR8 500 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 HINFPQ9BQA5 517 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 EPB41L5Q9HCM4 733 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 HOXC10Q9NYD6 342 aa15.44■□□□□ 0.06
PCDHGA11-201ENST00000398587 A0A0G2JLW4 131 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 TEX33O43247 280 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 CXCR5P32302 372 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 ZSCAN26Q16670 478 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 PADI6Q6TGC4 694 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 RIOK1Q9BRS2 568 aaKnown RBP15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 SENP2Q9HC62 589 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 AKT3Q9Y243 479 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 KDM6AO15550 1401 aaPredicted RBP15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 THAP12O43422 761 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 RASA1P20936 1047 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 SARNPP82979 210 aaKnown RBP15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 SLFN12LQ6IEE8 588 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 C16orf86Q6ZW13 317 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 PALM2Q8IXS6 379 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 MRPL47Q9HD33 250 aaKnown RBP15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 ZNF277Q9NRM2 450 aaPredicted RBP15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 TUBE1Q9UJT0 475 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 HPS5Q9UPZ3 1129 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 MST1RQ04912 1400 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 RIMS1Q86UR5 1692 aaKnown RBP15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 ADGRB2O60241 1585 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 PHBP35232 272 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 TFAMQ00059 246 aaKnown RBP15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 SURF1Q15526 300 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 KNOP1Q1ED39 458 aaKnown RBP15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 TOGARAM2Q6ZUX3 1019 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 MAP7D3Q8IWC1 876 aa15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 PROCA1Q8NCQ7 364 aaPredicted RBP15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 RAVER2Q9HCJ3 691 aaKnown RBP15.43■□□□□ 0.06
PCDHGA11-201ENST00000398587 A0A1W2PQC6 194 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 TLR3O15455 904 aaKnown RBP15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 NAALADL2Q58DX5 795 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 EEPD1Q7L9B9 569 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 VSIG1Q86XK7 387 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 XXYLT1Q8NBI6 393 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 PDS5AQ29RF7 1337 aaKnown RBP15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 POTEFA5A3E0 1075 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 CAPN9O14815 690 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 SEC31AO94979 1220 aaKnown RBP15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 POTEIP0CG38 1075 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 STX2P32856 288 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 KCNH2Q12809 1159 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 POTEGQ6S5H5 508 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 POTEEQ6S8J3 1075 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 CTAGE3PQ8IX95 158 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 NSUN6Q8TEA1 469 aaKnown RBP15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 PPM1EQ8WY54 764 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 DYDC2Q96IM9 177 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 WRNIP1Q96S55 665 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 TRIM9Q9C026 710 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 PPANQ9NQ55 473 aaKnown RBP15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 RNF146Q9NTX7 359 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 ZHX2Q9Y6X8 837 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 P4HBP07237 508 aaKnown RBP15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 SPP2Q13103 211 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 RNF169Q8NCN4 708 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 PPARDQ03181 441 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 CAPS2Q9BXY5 557 aa15.42■□□□□ 0.06
PCDHGA11-201ENST00000398587 NYAP2Q9P242 653 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms