RNA–Protein interactions for RNA: ENST00000398545.4

CFAP53-201, Transcript of cilia and flagella associated protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFAP53, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53-201ENST00000398545 EPN3Q9H201 632 aa16.7■□□□□ 0.26
CFAP53-201ENST00000398545 FAM153AQ9UHL3 310 aa16.7■□□□□ 0.26
CFAP53-201ENST00000398545 CCNL1Q9UK58 526 aaPredicted RBP16.7■□□□□ 0.26
CFAP53-201ENST00000398545 VGLL3A8MV65 326 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 TBX3O15119 743 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 RAD51CO43502 376 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 FLOT1O75955 427 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 GFPT2O94808 682 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 SSBP05455 408 aaKnown RBP eCLIP16.69■□□□□ 0.26
CFAP53-201ENST00000398545 NR2F2P24468 414 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 RFC4P35249 363 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 AP3B2Q13367 1082 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 PDCLQ13371 301 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 DPP8Q6V1X1 898 aaPredicted RBP16.69■□□□□ 0.26
CFAP53-201ENST00000398545 IRF2BP2Q7Z5L9 587 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 NELFCDQ8IXH7 590 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 MICALL1Q8N3F8 863 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 KCTD17Q8N5Z5 321 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 IFT81Q8WYA0 676 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 METTL14Q9HCE5 456 aaKnown RBP16.69■□□□□ 0.26
CFAP53-201ENST00000398545 HDAC9Q9UKV0 1011 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 GOLGA6L10A6NI86 522 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 PDXKO00764 312 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 SLC16A3O15427 465 aaKnown RBP16.69■□□□□ 0.26
CFAP53-201ENST00000398545 AFPP02771 609 aaKnown RBP16.69■□□□□ 0.26
CFAP53-201ENST00000398545 LSP1P33241 339 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 DPY19L2P1Q6NXN4 242 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 MMS22LQ6ZRQ5 1243 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 VPS36Q86VN1 386 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 LRRC57Q8N9N7 239 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 C3orf20Q8ND61 904 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 ERMNQ8TAM6 284 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 LMBR1Q8WVP7 490 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 GPR101Q96P66 508 aaPredicted RBP16.69■□□□□ 0.26
CFAP53-201ENST00000398545 SPAG5Q96R06 1193 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 FGFBP2Q9BYJ0 223 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 DHX36Q9H2U1 1008 aaKnown RBP16.69■□□□□ 0.26
CFAP53-201ENST00000398545 ARMCX3Q9UH62 379 aaPredicted RBP16.69■□□□□ 0.26
CFAP53-201ENST00000398545 SERPINB13Q9UIV8 391 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 NENFQ9UMX5 172 aa16.69■□□□□ 0.26
CFAP53-201ENST00000398545 SIPA1L1O43166 1804 aa16.68■□□□□ 0.26
CFAP53-201ENST00000398545 POTEB3A0JP26 581 aa16.68■□□□□ 0.26
CFAP53-201ENST00000398545 GTPBP10A4D1E9 387 aaKnown RBP16.68■□□□□ 0.26
CFAP53-201ENST00000398545 ZSCAN5CA6NGD5 496 aaPredicted RBP16.68■□□□□ 0.26
CFAP53-201ENST00000398545 POTECB2RU33 542 aa16.68■□□□□ 0.26
CFAP53-201ENST00000398545 PGRMC1O00264 195 aaKnown RBP16.68■□□□□ 0.26
CFAP53-201ENST00000398545 CALUO43852 315 aaPredicted RBP16.68■□□□□ 0.26
CFAP53-201ENST00000398545 PPP1R37O75864 691 aa16.68■□□□□ 0.26
CFAP53-201ENST00000398545 KRT18P05783 430 aaKnown RBP16.68■□□□□ 0.26
CFAP53-201ENST00000398545 UCHL3P15374 230 aa16.68■□□□□ 0.26
CFAP53-201ENST00000398545 INPP5BP32019 993 aa16.68■□□□□ 0.26
CFAP53-201ENST00000398545 NPEPPSP55786 919 aa16.68■□□□□ 0.26
CFAP53-201ENST00000398545 PTK2Q05397 1052 aa16.68■□□□□ 0.26
CFAP53-201ENST00000398545 MTMR3Q13615 1198 aa16.68■□□□□ 0.26
CFAP53-201ENST00000398545 BMT2Q1RMZ1 405 aa16.68■□□□□ 0.26
CFAP53-201ENST00000398545 POTEBQ6S5H4 581 aa16.68■□□□□ 0.26
CFAP53-201ENST00000398545 EPM2AIP1Q7L775 607 aaPredicted RBP16.68■□□□□ 0.26
CFAP53-201ENST00000398545 SYCE1Q8N0S2 351 aa16.68■□□□□ 0.26
CFAP53-201ENST00000398545 PACSIN1Q9BY11 444 aa16.68■□□□□ 0.26
CFAP53-201ENST00000398545 EHD4Q9H223 541 aa16.68■□□□□ 0.26
CFAP53-201ENST00000398545 NAGPAQ9UK23 515 aa16.68■□□□□ 0.26
CFAP53-201ENST00000398545 ESYT3A0FGR9 886 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 KIAA0754O94854 1291 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 USP8P40818 1118 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 EXOC3L4Q17RC7 722 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 FAM98CQ17RN3 349 aaKnown RBP16.67■□□□□ 0.26
CFAP53-201ENST00000398545 KNOP1Q1ED39 458 aaKnown RBP16.67■□□□□ 0.26
CFAP53-201ENST00000398545 RBM17Q96I25 401 aaKnown RBP16.67■□□□□ 0.26
CFAP53-201ENST00000398545 RNPC3Q96LT9 517 aaKnown RBP16.67■□□□□ 0.26
CFAP53-201ENST00000398545 SLITRK6Q9H5Y7 841 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 TBC1D7Q9P0N9 293 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 ANKRD65E5RJM6 399 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 KCNK3O14649 394 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 BBOX1O75936 387 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 XRCC5P13010 732 aaKnown RBP16.67■□□□□ 0.26
CFAP53-201ENST00000398545 ADRA2BP18089 450 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 RPL13P26373 211 aaKnown RBP16.67■□□□□ 0.26
CFAP53-201ENST00000398545 MDH1P40925 334 aaKnown RBP16.67■□□□□ 0.26
CFAP53-201ENST00000398545 ARID5AQ03989 594 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 ITGB3BPQ13352 177 aaPredicted RBP16.67■□□□□ 0.26
CFAP53-201ENST00000398545 BIRC3Q13489 604 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 PTGISQ16647 500 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 TRAPPC3LQ5T215 181 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 PRR5LQ6MZQ0 368 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 ZNF571Q7Z3V5 609 aaPredicted RBP16.67■□□□□ 0.26
CFAP53-201ENST00000398545 SLFN11Q7Z7L1 901 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 GPIHBP1Q8IV16 184 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 RASGEF1CQ8N431 466 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 SH2D3CQ8N5H7 860 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 CCDC17Q96LX7 622 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.67■□□□□ 0.26
CFAP53-201ENST00000398545 ANO3Q9BYT9 981 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 TMBIM4Q9HC24 238 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 PLAAQ9Y263 795 aa16.67■□□□□ 0.26
CFAP53-201ENST00000398545 ADAMTSL1Q8N6G6 1762 aa16.66■□□□□ 0.26
CFAP53-201ENST00000398545 MEFVO15553 781 aaPredicted RBP16.66■□□□□ 0.26
CFAP53-201ENST00000398545 ZBTB48P10074 688 aaPredicted RBP16.66■□□□□ 0.26
CFAP53-201ENST00000398545 GUCY2FP51841 1108 aa16.66■□□□□ 0.26
CFAP53-201ENST00000398545 ARSHQ5FYA8 562 aa16.66■□□□□ 0.26
CFAP53-201ENST00000398545 KCTD16Q68DU8 428 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms