RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 TNPO1Q92973 898 aaKnown RBP16.32■□□□□ 0.2
SNRNP25-203ENST00000397876 ANO3Q9BYT9 981 aa16.32■□□□□ 0.2
SNRNP25-203ENST00000397876 GLT8D2Q9H1C3 349 aa16.32■□□□□ 0.2
SNRNP25-203ENST00000397876 BRPF3Q9ULD4 1205 aa16.32■□□□□ 0.2
SNRNP25-203ENST00000397876 NFASCO94856 1347 aa16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 STXBP3O00186 592 aa16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 HMGB1P09429 215 aaKnown RBP16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 RCAN1P53805 252 aa16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 FGD1P98174 961 aa16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 MGAT3Q09327 533 aa16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 FUT2Q10981 343 aa16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 AP3B2Q13367 1082 aa16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 LPIN1Q14693 890 aa16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 ADCK5Q3MIX3 580 aa16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 CEP55Q53EZ4 464 aa16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 RASEFQ8IZ41 740 aa16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 DNAJB3Q8WWF6 145 aa16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 MRPL38Q96DV4 380 aaKnown RBP16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 PGBD1Q96JS3 809 aa16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 UBE2ZQ9H832 354 aaPredicted RBP16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 BARHL2Q9NY43 387 aa16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 NAP1L2Q9ULW6 460 aaPredicted RBP16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 TRPC6Q9Y210 931 aa16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 V9GY48 417 aaPredicted RBP16.31■□□□□ 0.2
SNRNP25-203ENST00000397876 SMCO2A6NFE2 343 aa16.3■□□□□ 0.2
SNRNP25-203ENST00000397876 INSRRP14616 1297 aa16.3■□□□□ 0.2
SNRNP25-203ENST00000397876 ACTR2P61160 394 aa16.3■□□□□ 0.2
SNRNP25-203ENST00000397876 MRPS6P82932 125 aaKnown RBP16.3■□□□□ 0.2
SNRNP25-203ENST00000397876 TIGD5Q53EQ6 642 aa16.3■□□□□ 0.2
SNRNP25-203ENST00000397876 MARCH8Q5T0T0 291 aa16.3■□□□□ 0.2
SNRNP25-203ENST00000397876 TSHZ1Q6ZSZ6 1077 aa16.3■□□□□ 0.2
SNRNP25-203ENST00000397876 TMEM192Q8IY95 271 aa16.3■□□□□ 0.2
SNRNP25-203ENST00000397876 IL17RAQ96F46 866 aa16.3■□□□□ 0.2
SNRNP25-203ENST00000397876 PCYT2Q99447 389 aa16.3■□□□□ 0.2
SNRNP25-203ENST00000397876 FAM49AQ9H0Q0 323 aaPredicted RBP16.3■□□□□ 0.2
SNRNP25-203ENST00000397876 CDY2AQ9Y6F7 541 aa16.3■□□□□ 0.2
SNRNP25-203ENST00000397876 RALGAPA2Q2PPJ7 1873 aa16.29■□□□□ 0.2
SNRNP25-203ENST00000397876 NLRC5Q86WI3 1866 aa16.29■□□□□ 0.2
SNRNP25-203ENST00000397876 BRWD1Q9NSI6 2320 aa16.29■□□□□ 0.2
SNRNP25-203ENST00000397876 H3BNC9 293 aa16.29■□□□□ 0.2
SNRNP25-203ENST00000397876 M0QZ92 97 aa16.29■□□□□ 0.2
SNRNP25-203ENST00000397876 COL9A1P20849 921 aa16.29■□□□□ 0.2
SNRNP25-203ENST00000397876 ZNF76P36508 570 aa16.29■□□□□ 0.2
SNRNP25-203ENST00000397876 SREBF1P36956 1147 aa16.29■□□□□ 0.2
SNRNP25-203ENST00000397876 GPM6BQ13491 265 aa16.29■□□□□ 0.2
SNRNP25-203ENST00000397876 FBXO47Q5MNV8 452 aa16.29■□□□□ 0.2
SNRNP25-203ENST00000397876 IER5Q5VY09 327 aa16.29■□□□□ 0.2
SNRNP25-203ENST00000397876 PLPPR4Q7Z2D5 763 aa16.29■□□□□ 0.2
SNRNP25-203ENST00000397876 FIBCD1Q8N539 461 aa16.29■□□□□ 0.2
SNRNP25-203ENST00000397876 CYP2W1Q8TAV3 490 aa16.29■□□□□ 0.2
SNRNP25-203ENST00000397876 AGO4Q9HCK5 861 aaKnown RBP16.29■□□□□ 0.2
SNRNP25-203ENST00000397876 ADGRA3Q8IWK6 1321 aa16.28■□□□□ 0.2
SNRNP25-203ENST00000397876 CCDC196A0A1B0GTZ2 297 aa16.28■□□□□ 0.2
SNRNP25-203ENST00000397876 ARP10275 920 aa16.28■□□□□ 0.2
SNRNP25-203ENST00000397876 CDC27P30260 824 aa16.28■□□□□ 0.2
SNRNP25-203ENST00000397876 CTNNB1P35222 781 aa16.28■□□□□ 0.2
SNRNP25-203ENST00000397876 SLC26A2P50443 739 aa16.28■□□□□ 0.2
SNRNP25-203ENST00000397876 METAP2P50579 478 aaKnown RBP eCLIP16.28■□□□□ 0.2
SNRNP25-203ENST00000397876 STAT5BP51692 787 aa16.28■□□□□ 0.2
SNRNP25-203ENST00000397876 ITGB3BPQ13352 177 aaPredicted RBP16.28■□□□□ 0.2
SNRNP25-203ENST00000397876 PLCB4Q15147 1175 aa16.28■□□□□ 0.2
SNRNP25-203ENST00000397876 C1QTNF1Q9BXJ1 281 aa16.28■□□□□ 0.2
SNRNP25-203ENST00000397876 TMEM260Q9NX78 707 aa16.28■□□□□ 0.2
SNRNP25-203ENST00000397876 RWDD3Q9Y3V2 267 aa16.28■□□□□ 0.2
SNRNP25-203ENST00000397876 TRPV2Q9Y5S1 764 aa16.28■□□□□ 0.2
SNRNP25-203ENST00000397876 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.27■□□□□ 0.2
SNRNP25-203ENST00000397876 MEIS1O00470 390 aa16.27■□□□□ 0.2
SNRNP25-203ENST00000397876 KCNA5P22460 613 aa16.27■□□□□ 0.2
SNRNP25-203ENST00000397876 CLK2P49760 499 aaKnown RBP16.27■□□□□ 0.2
SNRNP25-203ENST00000397876 PFKFB3Q16875 520 aaPredicted RBP16.27■□□□□ 0.2
SNRNP25-203ENST00000397876 NIPA1Q7RTP0 329 aa16.27■□□□□ 0.2
SNRNP25-203ENST00000397876 BANK1Q8NDB2 785 aa16.27■□□□□ 0.2
SNRNP25-203ENST00000397876 ZBTB10Q96DT7 871 aa16.27■□□□□ 0.2
SNRNP25-203ENST00000397876 FAM217BQ9NTX9 383 aaPredicted RBP16.27■□□□□ 0.2
SNRNP25-203ENST00000397876 PCDHA2Q9Y5H9 948 aa16.27■□□□□ 0.2
SNRNP25-203ENST00000397876 SQORQ9Y6N5 450 aa16.27■□□□□ 0.2
SNRNP25-203ENST00000397876 POTEB3A0JP26 581 aa16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 DDX39AO00148 427 aaKnown RBP16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 ENPP3O14638 875 aa16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 BACH1O14867 736 aa16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 SCG2P13521 617 aa16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 CD52P31358 61 aa16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 LEXMQ3ZCV2 418 aa16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 JAKMIP3Q5VZ66 844 aa16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 FAM160B1Q5W0V3 765 aa16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 MCTP2Q6DN12 878 aa16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 POTEBQ6S5H4 581 aa16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 CCDC12Q8WUD4 166 aaPredicted RBP16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 TRAPPC12Q8WVT3 735 aa16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 JAKMIP1Q96N16 626 aaKnown RBP16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 C11orf84Q9BUA3 381 aaPredicted RBP16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 FTHL17Q9BXU8 183 aa16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 NSUN3Q9H649 340 aaKnown RBP16.26■□□□□ 0.19
SNRNP25-203ENST00000397876 SMIM35A0A1B0GVV1 85 aa16.25■□□□□ 0.19
SNRNP25-203ENST00000397876 ESYT2A0FGR8 921 aa16.25■□□□□ 0.19
SNRNP25-203ENST00000397876 C5orf67F2Z3F1 127 aa16.25■□□□□ 0.19
SNRNP25-203ENST00000397876 ATG7O95352 703 aa16.25■□□□□ 0.19
SNRNP25-203ENST00000397876 RB1P06400 928 aa16.25■□□□□ 0.19
SNRNP25-203ENST00000397876 CPA1P15085 419 aa16.25■□□□□ 0.19
SNRNP25-203ENST00000397876 ADD1P35611 737 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms