RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 SERPING1P05155 500 aa23.96■■□□□ 1.43
NFIX-203ENST00000397661 ASTE1Q2TB18 679 aaPredicted RBP23.96■■□□□ 1.43
NFIX-203ENST00000397661 MAEAQ7L5Y9 396 aa23.96■■□□□ 1.43
NFIX-203ENST00000397661 RDH13Q8NBN7 331 aa23.96■■□□□ 1.43
NFIX-203ENST00000397661 BHMT2Q9H2M3 363 aa23.96■■□□□ 1.43
NFIX-203ENST00000397661 DDTLA6NHG4 134 aaPredicted RBP23.95■■□□□ 1.43
NFIX-203ENST00000397661 CEP104O60308 925 aa23.95■■□□□ 1.43
NFIX-203ENST00000397661 HSF2BPO75031 334 aa23.95■■□□□ 1.43
NFIX-203ENST00000397661 GAKO14976 1311 aa23.95■■□□□ 1.42
NFIX-203ENST00000397661 UBAP1LF5GYI3 381 aa23.95■■□□□ 1.42
NFIX-203ENST00000397661 BBOX1O75936 387 aa23.95■■□□□ 1.42
NFIX-203ENST00000397661 GCNT3O95395 438 aa23.95■■□□□ 1.42
NFIX-203ENST00000397661 ZCWPW2Q504Y3 356 aa23.95■■□□□ 1.42
NFIX-203ENST00000397661 NAA35Q5VZE5 725 aa23.95■■□□□ 1.42
NFIX-203ENST00000397661 PPP4R3AQ6IN85 833 aa23.95■■□□□ 1.42
NFIX-203ENST00000397661 ZNF662Q6ZS27 426 aa23.95■■□□□ 1.42
NFIX-203ENST00000397661 ZNF622Q969S3 477 aaKnown RBP eCLIP23.95■■□□□ 1.42
NFIX-203ENST00000397661 ZIM3Q96PE6 472 aa23.95■■□□□ 1.42
NFIX-203ENST00000397661 SEPT11Q9NVA2 429 aaKnown RBP23.95■■□□□ 1.42
NFIX-203ENST00000397661 A0A087WUV0 522 aaPredicted RBP23.95■■□□□ 1.42
NFIX-203ENST00000397661 REEP2Q9BRK0 252 aa23.95■■□□□ 1.42
NFIX-203ENST00000397661 DDX60LQ5H9U9 1706 aaKnown RBP23.94■■□□□ 1.42
NFIX-203ENST00000397661 TBC1D10BQ4KMP7 808 aaPredicted RBP23.94■■□□□ 1.42
NFIX-203ENST00000397661 MEX3CQ5U5Q3 659 aaKnown RBP23.94■■□□□ 1.42
NFIX-203ENST00000397661 MSL1Q68DK7 614 aa23.94■■□□□ 1.42
NFIX-203ENST00000397661 PKD2L1Q9P0L9 805 aa23.94■■□□□ 1.42
NFIX-203ENST00000397661 POLD1P28340 1107 aa23.94■■□□□ 1.42
NFIX-203ENST00000397661 PSMD2Q13200 908 aa23.94■■□□□ 1.42
NFIX-203ENST00000397661 CTTNQ14247 550 aaKnown RBP23.94■■□□□ 1.42
NFIX-203ENST00000397661 LRRC27Q9C0I9 530 aa23.94■■□□□ 1.42
NFIX-203ENST00000397661 MNAT1P51948 309 aa23.93■■□□□ 1.42
NFIX-203ENST00000397661 ARHGAP4P98171 946 aa23.93■■□□□ 1.42
NFIX-203ENST00000397661 MAATS1Q7Z4T9 603 aa23.93■■□□□ 1.42
NFIX-203ENST00000397661 TRIM59Q8IWR1 403 aa23.93■■□□□ 1.42
NFIX-203ENST00000397661 TRIM31Q9BZY9 425 aa23.93■■□□□ 1.42
NFIX-203ENST00000397661 DHX36Q9H2U1 1008 aaKnown RBP23.93■■□□□ 1.42
NFIX-203ENST00000397661 DNAJC18Q9H819 358 aa23.93■■□□□ 1.42
NFIX-203ENST00000397661 MYH1P12882 1939 aa23.93■■□□□ 1.42
NFIX-203ENST00000397661 ZYXQ15942 572 aaKnown RBP23.93■■□□□ 1.42
NFIX-203ENST00000397661 CERKLQ49MI3 558 aaPredicted RBP23.93■■□□□ 1.42
NFIX-203ENST00000397661 TTMPQ5BVD1 217 aa23.93■■□□□ 1.42
NFIX-203ENST00000397661 ZNF571Q7Z3V5 609 aaPredicted RBP23.93■■□□□ 1.42
NFIX-203ENST00000397661 OR2W6PQ8NHA6 318 aa23.93■■□□□ 1.42
NFIX-203ENST00000397661 FAM163AQ96GL9 167 aaPredicted RBP23.93■■□□□ 1.42
NFIX-203ENST00000397661 NT5C3AQ9H0P0 336 aa23.93■■□□□ 1.42
NFIX-203ENST00000397661 BCCIPQ9P287 314 aaKnown RBP eCLIP23.93■■□□□ 1.42
NFIX-203ENST00000397661 ARMCX3Q9UH62 379 aaPredicted RBP23.93■■□□□ 1.42
NFIX-203ENST00000397661 FAM86B1E9PN63 330 aa23.93■■□□□ 1.42
NFIX-203ENST00000397661 FAM86B2P0C5J1 330 aa23.93■■□□□ 1.42
NFIX-203ENST00000397661 SNHG28P0DPA3 235 aa23.93■■□□□ 1.42
NFIX-203ENST00000397661 GUCY2CP25092 1073 aa23.93■■□□□ 1.42
NFIX-203ENST00000397661 HPDP32754 393 aaPredicted RBP23.93■■□□□ 1.42
NFIX-203ENST00000397661 TAF4BQ92750 862 aa23.93■■□□□ 1.42
NFIX-203ENST00000397661 AJAP1Q9UKB5 411 aaPredicted RBP23.93■■□□□ 1.42
NFIX-203ENST00000397661 SLC18A3Q16572 532 aa23.92■■□□□ 1.42
NFIX-203ENST00000397661 PCNTO95613 3336 aa23.92■■□□□ 1.42
NFIX-203ENST00000397661 NAV1Q8NEY1 1877 aa23.92■■□□□ 1.42
NFIX-203ENST00000397661 TRIM37O94972 964 aa23.92■■□□□ 1.42
NFIX-203ENST00000397661 SMARCA1P28370 1054 aa23.92■■□□□ 1.42
NFIX-203ENST00000397661 CLK2P49760 499 aaKnown RBP23.92■■□□□ 1.42
NFIX-203ENST00000397661 ZC2HC1CQ53FD0 456 aaPredicted RBP23.92■■□□□ 1.42
NFIX-203ENST00000397661 APOBEC3HQ6NTF7 200 aaKnown RBP23.92■■□□□ 1.42
NFIX-203ENST00000397661 TEKT1Q969V4 418 aa23.92■■□□□ 1.42
NFIX-203ENST00000397661 KCTD10Q9H3F6 313 aa23.92■■□□□ 1.42
NFIX-203ENST00000397661 DNM3Q9UQ16 869 aa23.92■■□□□ 1.42
NFIX-203ENST00000397661 SHTN1A0MZ66 631 aa23.91■■□□□ 1.42
NFIX-203ENST00000397661 GRID2IPA4D2P6 1211 aa23.91■■□□□ 1.42
NFIX-203ENST00000397661 AKAP3O75969 853 aa23.91■■□□□ 1.42
NFIX-203ENST00000397661 ABCB4P21439 1286 aa23.91■■□□□ 1.42
NFIX-203ENST00000397661 CRY2Q49AN0 593 aa23.91■■□□□ 1.42
NFIX-203ENST00000397661 CFAP58Q5T655 872 aa23.91■■□□□ 1.42
NFIX-203ENST00000397661 TPH2Q8IWU9 490 aa23.91■■□□□ 1.42
NFIX-203ENST00000397661 SPDYE3A6NKU9 549 aa23.91■■□□□ 1.42
NFIX-203ENST00000397661 EPHB4P54760 987 aa23.91■■□□□ 1.42
NFIX-203ENST00000397661 PRPF4BQ13523 1007 aaKnown RBP23.91■■□□□ 1.42
NFIX-203ENST00000397661 GPATCH4Q5T3I0 446 aaKnown RBP23.91■■□□□ 1.42
NFIX-203ENST00000397661 PCDHA2Q9Y5H9 948 aa23.91■■□□□ 1.42
NFIX-203ENST00000397661 COL5A3P25940 1745 aaPredicted RBP23.91■■□□□ 1.42
NFIX-203ENST00000397661 RAD51CO43502 376 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 EXOC3L4Q17RC7 722 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 PROM2Q8N271 834 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 CASKIN2Q8WXE0 1202 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 RUSC1Q9BVN2 902 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 SSU72P8A0A1W2PR75 194 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 NDUFAB1O14561 156 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 GFPT2O94808 682 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 PPFIA1Q13136 1202 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 NAB2Q15742 525 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 SH2D3AQ9BRG2 576 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 DDX47Q9H0S4 455 aaKnown RBP23.9■■□□□ 1.42
NFIX-203ENST00000397661 IGKV6D-41A0A0C4DH26 115 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 LCA5LO95447 670 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 XRCC5P13010 732 aaKnown RBP23.9■■□□□ 1.42
NFIX-203ENST00000397661 UCHL3P15374 230 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 NMT1P30419 496 aaKnown RBP23.9■■□□□ 1.42
NFIX-203ENST00000397661 GUCY1A3Q02108 690 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 NNTQ13423 1086 aa23.9■■□□□ 1.42
NFIX-203ENST00000397661 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.9■■□□□ 1.42
NFIX-203ENST00000397661 CHORDC1Q9UHD1 332 aaPredicted RBP23.9■■□□□ 1.42
NFIX-203ENST00000397661 MEIS2O14770 477 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms