RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ESYT3A0FGR9 886 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 SLC37A4O43826 429 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 ECHS1P30084 290 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 TNNC1P63316 161 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 SLC4A8Q2Y0W8 1093 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 C6orf89Q6UWU4 347 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 KCNK18Q7Z418 384 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 TTLL6Q8N841 843 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 C3orf20Q8ND61 904 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 GLIS3Q8NEA6 775 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 MYCBPAPQ8TBZ2 947 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 SCFD2Q8WU76 684 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 NUDT12Q9BQG2 462 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 TAF1DQ9H5J8 278 aaPredicted RBP14.62□□□□□ -0.07
TRIM40-207ENST00000396581 ZNF287Q9HBT7 754 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 A1CFQ9NQ94 594 aaKnown RBP14.62□□□□□ -0.07
TRIM40-207ENST00000396581 SEC63Q9UGP8 760 aaKnown RBP14.62□□□□□ -0.07
TRIM40-207ENST00000396581 A0A087X0T9 212 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 H0YGN5 161 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 RAD51CO43502 376 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 KIAA0754O94854 1291 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 FTCDO95954 541 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 FAM107AO95990 144 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 FAM228BP0C875 321 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 ZBTB48P10074 688 aaPredicted RBP14.62□□□□□ -0.07
TRIM40-207ENST00000396581 KCNA3P22001 575 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 FKBP1AP62942 108 aaKnown RBP14.62□□□□□ -0.07
TRIM40-207ENST00000396581 GUCY1A3Q02108 690 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 COASYQ13057 564 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 PLCB4Q15147 1175 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 HYIQ5T013 277 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 C10orf76Q5T2E6 689 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 STRIP1Q5VSL9 837 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 C16orf86Q6ZW13 317 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 OTUD6BQ8N6M0 293 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 IFT81Q8WYA0 676 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 CDK5RAP3Q96JB5 506 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 GANQ9H2C0 597 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 CPVLQ9H3G5 476 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 DBNDD1Q9H9R9 158 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 NLRC4Q9NPP4 1024 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 BIN2Q9UBW5 565 aaPredicted RBP14.62□□□□□ -0.07
TRIM40-207ENST00000396581 NFS1Q9Y697 457 aa14.62□□□□□ -0.07
TRIM40-207ENST00000396581 KRT79Q5XKE5 535 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 HHIPL2Q6UWX4 724 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 TEX11Q8IYF3 940 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 SNX29Q8TEQ0 813 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 TBC1D5Q92609 795 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 CALR3Q96L12 384 aaKnown RBP14.61□□□□□ -0.07
TRIM40-207ENST00000396581 CCT8L2Q96SF2 557 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 MRIQ9BWK5 157 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 LSM14BQ9BX40 385 aaKnown RBP14.61□□□□□ -0.07
TRIM40-207ENST00000396581 TMEM260Q9NX78 707 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 PCDHA2Q9Y5H9 948 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 CAPN7Q9Y6W3 813 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 POTEMA6NI47 508 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 POLR2FP61218 127 aaKnown RBP14.61□□□□□ -0.07
TRIM40-207ENST00000396581 DRP2Q13474 957 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 CUL1Q13616 776 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 DPY19L2P1Q6NXN4 242 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 USP17L2Q6R6M4 530 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 NLRP14Q86W24 1093 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 ARFGAP2Q8N6H7 521 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 SUPT20HQ8NEM7 779 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 ACTRT1Q8TDG2 376 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 PBKQ96KB5 322 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 CABS1Q96KC9 395 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 PIGSQ96S52 555 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 TANGO6Q9C0B7 1094 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 KCNQ5Q9NR82 932 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 ZNF219Q9P2Y4 722 aaPredicted RBP14.61□□□□□ -0.07
TRIM40-207ENST00000396581 PLAAQ9Y263 795 aa14.61□□□□□ -0.07
TRIM40-207ENST00000396581 C21orf2O43822 256 aa14.6□□□□□ -0.07
TRIM40-207ENST00000396581 USP11P51784 963 aa14.6□□□□□ -0.07
TRIM40-207ENST00000396581 GUCY2FP51841 1108 aa14.6□□□□□ -0.07
TRIM40-207ENST00000396581 ERVK-9P63128 1117 aa14.6□□□□□ -0.07
TRIM40-207ENST00000396581 LRRC41Q15345 812 aa14.6□□□□□ -0.07
TRIM40-207ENST00000396581 TRADDQ15628 312 aa14.6□□□□□ -0.07
TRIM40-207ENST00000396581 ECM1Q16610 540 aa14.6□□□□□ -0.07
TRIM40-207ENST00000396581 KIAA0753Q2KHM9 967 aa14.6□□□□□ -0.07
TRIM40-207ENST00000396581 CCDC91Q7Z6B0 441 aa14.6□□□□□ -0.07
TRIM40-207ENST00000396581 MAPKAPK5Q8IW41 473 aa14.6□□□□□ -0.07
TRIM40-207ENST00000396581 MXD3Q9BW11 206 aa14.6□□□□□ -0.07
TRIM40-207ENST00000396581 SLC12A6Q9UHW9 1150 aa14.6□□□□□ -0.07
TRIM40-207ENST00000396581 TRAF5O00463 557 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 ECE2O60344 883 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 TDP2O95551 362 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 CDK8P49336 464 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 CCDC40Q4G0X9 1142 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 FAM26FQ5R3K3 315 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 DACT2Q5SW24 774 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 GPIHBP1Q8IV16 184 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 LRRC57Q8N9N7 239 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 KCTD10Q9H3F6 313 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 VCPKMTQ9H867 229 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 KIF4AO95239 1232 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 DPEP1P16444 411 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 HSD17B3P37058 310 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 ACTN3Q08043 901 aaPredicted RBP14.59□□□□□ -0.07
TRIM40-207ENST00000396581 KLHL30Q0D2K2 578 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms