RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 LZTS2Q9BRK4 669 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 CCSER1Q9C0I3 900 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 ZNF287Q9HBT7 754 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 HGSO14964 777 aaPredicted RBP10.23□□□□□ -0.77
NDE1-201ENST00000396354 HEXIM1O94992 359 aaKnown RBP10.23□□□□□ -0.77
NDE1-201ENST00000396354 ABCB4P21439 1286 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 ODF2Q5BJF6 829 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 HHIPL2Q6UWX4 724 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 CCNI2Q6ZMN8 369 aaPredicted RBP10.23□□□□□ -0.77
NDE1-201ENST00000396354 SLF2Q8IX21 1173 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 SPAG5Q96R06 1193 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 PPP1R1BQ9UD71 204 aaPredicted RBP10.23□□□□□ -0.77
NDE1-201ENST00000396354 SNX12Q9UMY4 172 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 GLI1P08151 1106 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 HOXA13P31271 388 aaPredicted RBP10.22□□□□□ -0.77
NDE1-201ENST00000396354 PDE6BP35913 854 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 CLK2P49760 499 aaKnown RBP10.22□□□□□ -0.77
NDE1-201ENST00000396354 ADCY7P51828 1080 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 SEC24CP53992 1094 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 SEPT2Q15019 361 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 KRT25Q7Z3Z0 450 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 FAM114A1Q8IWE2 563 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 HAS1Q92839 578 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 ELMO3Q96BJ8 720 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 DHTKD1Q96HY7 919 aaPredicted RBP10.22□□□□□ -0.77
NDE1-201ENST00000396354 ZDHHC15Q96MV8 337 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 TSPYL1Q9H0U9 437 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 WDR70Q9NW82 654 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 DDX25Q9UHL0 483 aaKnown RBP10.22□□□□□ -0.77
NDE1-201ENST00000396354 SCAF8Q9UPN6 1271 aaKnown RBP10.22□□□□□ -0.77
NDE1-201ENST00000396354 PCDHB13Q9Y5F0 798 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 CEP104O60308 925 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 EEF2P13639 858 aaKnown RBP10.22□□□□□ -0.77
NDE1-201ENST00000396354 KLRC1P26715 233 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 PRPHP41219 470 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 ZYXQ15942 572 aaKnown RBP10.22□□□□□ -0.77
NDE1-201ENST00000396354 PRR16Q569H4 304 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 KIAA1755Q5JYT7 1200 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 FBXW10Q5XX13 1052 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 GALNT17Q6IS24 598 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 GPBP1Q86WP2 473 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 CREG2Q8IUH2 290 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 EHBP1Q8NDI1 1231 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 SLC16A10Q8TF71 515 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 HNRNPLLQ8WVV9 542 aaKnown RBP10.22□□□□□ -0.77
NDE1-201ENST00000396354 TDRD3Q9H7E2 651 aaKnown RBP10.22□□□□□ -0.77
NDE1-201ENST00000396354 PPANQ9NQ55 473 aaKnown RBP10.22□□□□□ -0.77
NDE1-201ENST00000396354 PANK4Q9NVE7 773 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 PCDHA12Q9UN75 941 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.22□□□□□ -0.77
NDE1-201ENST00000396354 AGPSO00116 658 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 NDUFAB1O14561 156 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 ALDH1B1P30837 517 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 KLHL30Q0D2K2 578 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 TRIM58Q8NG06 486 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 TSG101Q99816 390 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 PYM1Q9BRP8 204 aaKnown RBP10.22□□□□□ -0.77
NDE1-201ENST00000396354 DPH5Q9H2P9 285 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 SUGT1Q9Y2Z0 365 aa10.22□□□□□ -0.77
NDE1-201ENST00000396354 A0A087X0T9 212 aa10.21□□□□□ -0.77
NDE1-201ENST00000396354 ESYT2A0FGR8 921 aa10.21□□□□□ -0.77
NDE1-201ENST00000396354 HSF2BPO75031 334 aa10.21□□□□□ -0.77
NDE1-201ENST00000396354 PRPF6O94906 941 aaKnown RBP10.21□□□□□ -0.77
NDE1-201ENST00000396354 FAM228BP0C875 321 aa10.21□□□□□ -0.77
NDE1-201ENST00000396354 NBPF9Q3BBW0 867 aa10.21□□□□□ -0.77
NDE1-201ENST00000396354 ASPRV1Q53RT3 343 aa10.21□□□□□ -0.77
NDE1-201ENST00000396354 PACS2Q86VP3 889 aa10.21□□□□□ -0.77
NDE1-201ENST00000396354 MYOCDQ8IZQ8 938 aa10.21□□□□□ -0.77
NDE1-201ENST00000396354 PRMT6Q96LA8 375 aaPredicted RBP10.21□□□□□ -0.77
NDE1-201ENST00000396354 SH2D4AQ9H788 454 aa10.21□□□□□ -0.77
NDE1-201ENST00000396354 GOPCQ9HD26 462 aa10.21□□□□□ -0.77
NDE1-201ENST00000396354 MYO1AQ9UBC5 1043 aa10.21□□□□□ -0.77
NDE1-201ENST00000396354 TMEM110-MUSTN1A8MSY1 372 aa10.21□□□□□ -0.78
NDE1-201ENST00000396354 SLC9A1P19634 815 aa10.21□□□□□ -0.78
NDE1-201ENST00000396354 FAM26FQ5R3K3 315 aa10.21□□□□□ -0.78
NDE1-201ENST00000396354 FAM83BQ5T0W9 1011 aa10.21□□□□□ -0.78
NDE1-201ENST00000396354 NOX5Q96PH1 765 aa10.21□□□□□ -0.78
NDE1-201ENST00000396354 CAPS2Q9BXY5 557 aa10.21□□□□□ -0.78
NDE1-201ENST00000396354 MTFR1LQ9H019 292 aa10.21□□□□□ -0.78
NDE1-201ENST00000396354 JRKLQ9Y4A0 524 aa10.21□□□□□ -0.78
NDE1-201ENST00000396354 A0A1W2PRG0 241 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 IVLP07476 585 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 SMARCA1P28370 1054 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 NT5C2P49902 561 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 CASP5P51878 434 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 KCNA1Q09470 495 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 PDAP1Q13442 181 aaKnown RBP10.2□□□□□ -0.78
NDE1-201ENST00000396354 ADAM9Q13443 819 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 TTC31Q49AM3 519 aaPredicted RBP10.2□□□□□ -0.78
NDE1-201ENST00000396354 SFMBT2Q5VUG0 894 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 GPATCH11Q8N954 259 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 DDX47Q9H0S4 455 aaKnown RBP10.2□□□□□ -0.78
NDE1-201ENST00000396354 PNMA6FA0A0J9YX94 578 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 A0A1W2PQC6 194 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 RSPH10B2B2RC85 870 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 H0YIN7 160 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 RSPH10BP0C881 870 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 USP8P40818 1118 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 PSMC6P62333 389 aa10.2□□□□□ -0.78
NDE1-201ENST00000396354 COASYQ13057 564 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms