RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 SP7Q8TDD2 431 aaPredicted RBP18.66■□□□□ 0.58
DDR1-229ENST00000396342 DNAJB3Q8WWF6 145 aa18.66■□□□□ 0.58
DDR1-229ENST00000396342 ANO3Q9BYT9 981 aa18.66■□□□□ 0.58
DDR1-229ENST00000396342 UBE2ZQ9H832 354 aaPredicted RBP18.66■□□□□ 0.58
DDR1-229ENST00000396342 C6orf50Q9HD87 102 aa18.66■□□□□ 0.58
DDR1-229ENST00000396342 BARHL2Q9NY43 387 aa18.66■□□□□ 0.58
DDR1-229ENST00000396342 NFASCO94856 1347 aa18.66■□□□□ 0.58
DDR1-229ENST00000396342 SCN5AQ14524 2016 aa18.66■□□□□ 0.58
DDR1-229ENST00000396342 LPXNO60711 386 aa18.65■□□□□ 0.58
DDR1-229ENST00000396342 RB1P06400 928 aa18.65■□□□□ 0.58
DDR1-229ENST00000396342 INSRRP14616 1297 aa18.65■□□□□ 0.58
DDR1-229ENST00000396342 COL9A1P20849 921 aa18.65■□□□□ 0.58
DDR1-229ENST00000396342 PSMA5P28066 241 aa18.65■□□□□ 0.58
DDR1-229ENST00000396342 GNA11P29992 359 aa18.65■□□□□ 0.58
DDR1-229ENST00000396342 ACTR2P61160 394 aa18.65■□□□□ 0.58
DDR1-229ENST00000396342 MIS18BP1Q6P0N0 1132 aa18.65■□□□□ 0.58
DDR1-229ENST00000396342 CKAP2LQ8IYA6 745 aa18.65■□□□□ 0.58
DDR1-229ENST00000396342 NME8Q8N427 588 aa18.65■□□□□ 0.58
DDR1-229ENST00000396342 BICD2Q8TD16 824 aa18.65■□□□□ 0.58
DDR1-229ENST00000396342 LRFN2Q9ULH4 789 aa18.65■□□□□ 0.58
DDR1-229ENST00000396342 CDY2AQ9Y6F7 541 aa18.65■□□□□ 0.58
DDR1-229ENST00000396342 POTEB3A0JP26 581 aa18.64■□□□□ 0.57
DDR1-229ENST00000396342 H3BNC9 293 aa18.64■□□□□ 0.57
DDR1-229ENST00000396342 CHRNA1P02708 482 aa18.64■□□□□ 0.57
DDR1-229ENST00000396342 KCNA5P22460 613 aa18.64■□□□□ 0.57
DDR1-229ENST00000396342 ADAM17P78536 824 aa18.64■□□□□ 0.57
DDR1-229ENST00000396342 PAK2Q13177 524 aa18.64■□□□□ 0.57
DDR1-229ENST00000396342 BTG3Q14201 252 aaPredicted RBP18.64■□□□□ 0.57
DDR1-229ENST00000396342 TSGA10IPQ3SY00 556 aa18.64■□□□□ 0.57
DDR1-229ENST00000396342 POTEBQ6S5H4 581 aa18.64■□□□□ 0.57
DDR1-229ENST00000396342 RUFY4Q6ZNE9 571 aa18.64■□□□□ 0.57
DDR1-229ENST00000396342 BANK1Q8NDB2 785 aa18.64■□□□□ 0.57
DDR1-229ENST00000396342 TRPV2Q9Y5S1 764 aa18.64■□□□□ 0.57
DDR1-229ENST00000396342 SQORQ9Y6N5 450 aa18.64■□□□□ 0.57
DDR1-229ENST00000396342 MBLAC1A4D2B0 266 aaPredicted RBP18.63■□□□□ 0.57
DDR1-229ENST00000396342 REC8O95072 547 aa18.63■□□□□ 0.57
DDR1-229ENST00000396342 SSTR3P32745 418 aaPredicted RBP18.63■□□□□ 0.57
DDR1-229ENST00000396342 LPIN1Q14693 890 aa18.63■□□□□ 0.57
DDR1-229ENST00000396342 BLOC1S2Q6QNY1 142 aa18.63■□□□□ 0.57
DDR1-229ENST00000396342 NIPA1Q7RTP0 329 aa18.63■□□□□ 0.57
DDR1-229ENST00000396342 SPRED2Q7Z698 418 aa18.63■□□□□ 0.57
DDR1-229ENST00000396342 PLA2G4DQ86XP0 818 aa18.63■□□□□ 0.57
DDR1-229ENST00000396342 CCDC148Q8NFR7 591 aa18.63■□□□□ 0.57
DDR1-229ENST00000396342 NECAB3Q96P71 396 aaPredicted RBP18.63■□□□□ 0.57
DDR1-229ENST00000396342 LMAN2LQ9H0V9 348 aa18.63■□□□□ 0.57
DDR1-229ENST00000396342 NSUN3Q9H649 340 aaKnown RBP18.63■□□□□ 0.57
DDR1-229ENST00000396342 TBC1D22BQ9NU19 505 aa18.63■□□□□ 0.57
DDR1-229ENST00000396342 CNTNAP5Q8WYK1 1306 aa18.63■□□□□ 0.57
DDR1-229ENST00000396342 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.62■□□□□ 0.57
DDR1-229ENST00000396342 HBP1O60381 514 aa18.62■□□□□ 0.57
DDR1-229ENST00000396342 SREBF1P36956 1147 aa18.62■□□□□ 0.57
DDR1-229ENST00000396342 SETQ01105 290 aaPredicted RBP18.62■□□□□ 0.57
DDR1-229ENST00000396342 EXOSC10Q01780 885 aaKnown RBP18.62■□□□□ 0.57
DDR1-229ENST00000396342 FBXO47Q5MNV8 452 aa18.62■□□□□ 0.57
DDR1-229ENST00000396342 PDXDC2PQ6P474 469 aa18.62■□□□□ 0.57
DDR1-229ENST00000396342 REXO1Q8N1G1 1221 aaKnown RBP18.62■□□□□ 0.57
DDR1-229ENST00000396342 TCEANC2Q96MN5 208 aa18.62■□□□□ 0.57
DDR1-229ENST00000396342 AGO4Q9HCK5 861 aaKnown RBP18.62■□□□□ 0.57
DDR1-229ENST00000396342 PCDHA2Q9Y5H9 948 aa18.62■□□□□ 0.57
DDR1-229ENST00000396342 BAZ2BQ9UIF8 2168 aaKnown RBP18.61■□□□□ 0.57
DDR1-229ENST00000396342 ADGRA3Q8IWK6 1321 aa18.61■□□□□ 0.57
DDR1-229ENST00000396342 DDX39AO00148 427 aaKnown RBP18.61■□□□□ 0.57
DDR1-229ENST00000396342 STXBP3O00186 592 aa18.61■□□□□ 0.57
DDR1-229ENST00000396342 ENPP3O14638 875 aa18.61■□□□□ 0.57
DDR1-229ENST00000396342 SCG2P13521 617 aa18.61■□□□□ 0.57
DDR1-229ENST00000396342 BMPR1AP36894 532 aa18.61■□□□□ 0.57
DDR1-229ENST00000396342 KRT76Q01546 638 aa18.61■□□□□ 0.57
DDR1-229ENST00000396342 LEXMQ3ZCV2 418 aa18.61■□□□□ 0.57
DDR1-229ENST00000396342 JAKMIP3Q5VZ66 844 aa18.61■□□□□ 0.57
DDR1-229ENST00000396342 CCDC136Q96JN2 1154 aa18.61■□□□□ 0.57
DDR1-229ENST00000396342 PGBD1Q96JS3 809 aa18.61■□□□□ 0.57
DDR1-229ENST00000396342 JAKMIP1Q96N16 626 aaKnown RBP18.61■□□□□ 0.57
DDR1-229ENST00000396342 ZNF302Q9NR11 478 aa18.61■□□□□ 0.57
DDR1-229ENST00000396342 BRPF3Q9ULD4 1205 aa18.61■□□□□ 0.57
DDR1-229ENST00000396342 GINS2Q9Y248 185 aa18.61■□□□□ 0.57
DDR1-229ENST00000396342 SAMM50Q9Y512 469 aa18.61■□□□□ 0.57
DDR1-229ENST00000396342 CDH23Q9H251 3354 aa18.61■□□□□ 0.57
DDR1-229ENST00000396342 SMIM35A0A1B0GVV1 85 aa18.6■□□□□ 0.57
DDR1-229ENST00000396342 MEIS1O00470 390 aa18.6■□□□□ 0.57
DDR1-229ENST00000396342 ARP10275 920 aa18.6■□□□□ 0.57
DDR1-229ENST00000396342 CD52P31358 61 aa18.6■□□□□ 0.57
DDR1-229ENST00000396342 PLCB4Q15147 1175 aa18.6■□□□□ 0.57
DDR1-229ENST00000396342 PFKFB3Q16875 520 aaPredicted RBP18.6■□□□□ 0.57
DDR1-229ENST00000396342 ZNF484Q5JVG2 852 aa18.6■□□□□ 0.57
DDR1-229ENST00000396342 PTCRAQ6ISU1 281 aaPredicted RBP18.6■□□□□ 0.57
DDR1-229ENST00000396342 NPAS4Q8IUM7 802 aa18.6■□□□□ 0.57
DDR1-229ENST00000396342 ZNF577Q9BSK1 485 aa18.6■□□□□ 0.57
DDR1-229ENST00000396342 PLVAPQ9BX97 442 aa18.6■□□□□ 0.57
DDR1-229ENST00000396342 CELF4Q9BZC1 486 aaKnown RBP18.6■□□□□ 0.57
DDR1-229ENST00000396342 CEP131Q9UPN4 1083 aa18.6■□□□□ 0.57
DDR1-229ENST00000396342 HCN4Q9Y3Q4 1203 aa18.6■□□□□ 0.57
DDR1-229ENST00000396342 TRIP12Q14669 1992 aaPredicted RBP18.59■□□□□ 0.57
DDR1-229ENST00000396342 GBF1Q92538 1859 aa18.59■□□□□ 0.57
DDR1-229ENST00000396342 DENND3A2RUS2 1198 aa18.59■□□□□ 0.57
DDR1-229ENST00000396342 IPO5O00410 1097 aaKnown RBP18.59■□□□□ 0.57
DDR1-229ENST00000396342 PSAPP07602 524 aa18.59■□□□□ 0.57
DDR1-229ENST00000396342 MGAT3Q09327 533 aa18.59■□□□□ 0.57
DDR1-229ENST00000396342 NFX1Q12986 1120 aaKnown RBP18.59■□□□□ 0.57
DDR1-229ENST00000396342 MKRN4PQ13434 485 aaPredicted RBP18.59■□□□□ 0.57
DDR1-229ENST00000396342 TMEM31Q5JXX7 168 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms