RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 ACTR2P61160 394 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 TTLL4Q14679 1199 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 DYMQ7RTS9 669 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 SYT2Q8N9I0 419 aaPredicted RBP22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 FAM200AQ8TCP9 573 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 PIGOQ8TEQ8 1089 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 SCFD2Q8WU76 684 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 SOCS4Q8WXH5 440 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 CCDC47Q96A33 483 aaKnown RBP22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 BMP2KQ9NSY1 1161 aaPredicted RBP22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 FARP2O94887 1054 aaPredicted RBP22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 GGPS1O95749 300 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 RGS2P41220 211 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 MRE11P49959 708 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 SLC12A3P55017 1021 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 PSMC5P62195 406 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 HTRA3P83110 453 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 GPBP1Q86WP2 473 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 MSL3Q8N5Y2 521 aaKnown RBP22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 DDX12PQ92771 950 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 BHMT2Q9H2M3 363 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 MLXIPQ9HAP2 919 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 PDGFCQ9NRA1 345 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 SYNGAP1Q96PV0 1343 aa22.78■■□□□ 1.24
VCPKMT-202ENST00000395860 KLRC4O43908 158 aa22.77■■□□□ 1.24
VCPKMT-202ENST00000395860 TBC1D8O95759 1140 aa22.77■■□□□ 1.24
VCPKMT-202ENST00000395860 SNAI1O95863 264 aaPredicted RBP22.77■■□□□ 1.24
VCPKMT-202ENST00000395860 HOXC6P09630 235 aa22.77■■□□□ 1.24
VCPKMT-202ENST00000395860 BMP6P22004 513 aa22.77■■□□□ 1.24
VCPKMT-202ENST00000395860 FCGRTP55899 365 aa22.77■■□□□ 1.24
VCPKMT-202ENST00000395860 KMT5BQ4FZB7 885 aa22.77■■□□□ 1.24
VCPKMT-202ENST00000395860 MIS18BP1Q6P0N0 1132 aa22.77■■□□□ 1.24
VCPKMT-202ENST00000395860 USP6NLQ92738 828 aa22.77■■□□□ 1.24
VCPKMT-202ENST00000395860 TXNP10599 105 aaKnown RBP22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 CTGFP29279 349 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 LACTBP83111 547 aaPredicted RBP22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 KCNB1Q14721 858 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 L1TD1Q5T7N2 865 aaKnown RBP22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 CCDC62Q6P9F0 684 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 METTL7BQ6UX53 244 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 TELO2Q9Y4R8 837 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 KRT18P05783 430 aaKnown RBP22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 CYP11B2P19099 503 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 CYP2B6P20813 491 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 PSMC4P43686 418 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 UGCGQ16739 394 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 TAPT1Q6NXT6 567 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 CNNM4Q6P4Q7 775 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 ABHD15Q6UXT9 468 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 C4orf19Q8IY42 314 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 MLKLQ8NB16 471 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 CBX8Q9HC52 389 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 GABBR1Q9UBS5 961 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 DACH1Q9UI36 760 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 GJD2Q9UKL4 321 aa22.76■■□□□ 1.23
VCPKMT-202ENST00000395860 ZBTB39O15060 712 aa22.75■■□□□ 1.23
VCPKMT-202ENST00000395860 DKC1O60832 514 aaKnown RBP eCLIP22.75■■□□□ 1.23
VCPKMT-202ENST00000395860 LYPLA2O95372 231 aa22.75■■□□□ 1.23
VCPKMT-202ENST00000395860 SUPT20HL2P0C7V6 817 aa22.75■■□□□ 1.23
VCPKMT-202ENST00000395860 CELF3Q5SZQ8 465 aaKnown RBP22.75■■□□□ 1.23
VCPKMT-202ENST00000395860 SWSAP1Q6NVH7 229 aa22.75■■□□□ 1.23
VCPKMT-202ENST00000395860 UNC13DQ70J99 1090 aa22.75■■□□□ 1.23
VCPKMT-202ENST00000395860 ATP6V0A1Q93050 837 aa22.75■■□□□ 1.23
VCPKMT-202ENST00000395860 APBA2Q99767 749 aa22.75■■□□□ 1.23
VCPKMT-202ENST00000395860 KATNBL1Q9H079 304 aa22.75■■□□□ 1.23
VCPKMT-202ENST00000395860 ABHD16BQ9H3Z7 469 aa22.75■■□□□ 1.23
VCPKMT-202ENST00000395860 EXOC1Q9NV70 894 aa22.75■■□□□ 1.23
VCPKMT-202ENST00000395860 THSD7BQ9C0I4 1608 aa22.75■■□□□ 1.23
VCPKMT-202ENST00000395860 PVALEFA0A1B0GWK0 134 aa22.74■■□□□ 1.23
VCPKMT-202ENST00000395860 TRPA1O75762 1119 aa22.74■■□□□ 1.23
VCPKMT-202ENST00000395860 RHOBTB3O94955 611 aa22.74■■□□□ 1.23
VCPKMT-202ENST00000395860 ATG7O95352 703 aa22.74■■□□□ 1.23
VCPKMT-202ENST00000395860 IDEP14735 1019 aa22.74■■□□□ 1.23
VCPKMT-202ENST00000395860 ZNF658Q5TYW1 1059 aaPredicted RBP22.74■■□□□ 1.23
VCPKMT-202ENST00000395860 DHX37Q8IY37 1157 aaKnown RBP22.74■■□□□ 1.23
VCPKMT-202ENST00000395860 CFHR5Q9BXR6 569 aa22.74■■□□□ 1.23
VCPKMT-202ENST00000395860 ARHGAP39Q9C0H5 1083 aa22.74■■□□□ 1.23
VCPKMT-202ENST00000395860 RNF186Q9NXI6 227 aa22.74■■□□□ 1.23
VCPKMT-202ENST00000395860 RBM47A0AV96 593 aaKnown RBP22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 BACH1O14867 736 aa22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 KIF22Q14807 665 aa22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 LUZP1Q86V48 1076 aa22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 CCDC60Q8IWA6 550 aaPredicted RBP22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 DNAJC19Q96DA6 116 aa22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 ZHX1Q9UKY1 873 aaPredicted RBP22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 ARID2Q68CP9 1835 aa22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 ARHGEF35A5YM69 484 aa22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 YWHABP31946 246 aaKnown RBP22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 SP3Q02447 781 aa22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 ACVR2BQ13705 512 aa22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 ARSHQ5FYA8 562 aa22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 COPS5Q92905 334 aa22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 TRIM47Q96LD4 638 aa22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 BPIFA3Q9BQP9 254 aa22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 FLRT1Q9NZU1 646 aa22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 DBR1Q9UK59 544 aaKnown RBP22.73■■□□□ 1.23
VCPKMT-202ENST00000395860 NPHP3-ACAD11A0A0J9YXS1 232 aa22.72■■□□□ 1.23
VCPKMT-202ENST00000395860 GSTTP1A0A1W2PQM5 241 aa22.72■■□□□ 1.23
VCPKMT-202ENST00000395860 NOP56O00567 594 aaKnown RBP22.72■■□□□ 1.23
VCPKMT-202ENST00000395860 XRCC6P12956 609 aaKnown RBP eCLIP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms