RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 LINC01553A4QN01 128 aa18.47■□□□□ 0.55
CXCL12-206ENST00000395795 EFCAB14O75071 495 aa18.47■□□□□ 0.55
CXCL12-206ENST00000395795 GNAT1P11488 350 aa18.47■□□□□ 0.55
CXCL12-206ENST00000395795 ACTR2P61160 394 aa18.47■□□□□ 0.55
CXCL12-206ENST00000395795 PPFIA1Q13136 1202 aa18.47■□□□□ 0.55
CXCL12-206ENST00000395795 GRB10Q13322 594 aa18.47■□□□□ 0.55
CXCL12-206ENST00000395795 NIPA1Q7RTP0 329 aa18.47■□□□□ 0.55
CXCL12-206ENST00000395795 SP7Q8TDD2 431 aaPredicted RBP18.47■□□□□ 0.55
CXCL12-206ENST00000395795 ARNTL2Q8WYA1 636 aa18.47■□□□□ 0.55
CXCL12-206ENST00000395795 RAD9AQ99638 391 aa18.47■□□□□ 0.55
CXCL12-206ENST00000395795 SMARCAD1Q9H4L7 1026 aa18.47■□□□□ 0.55
CXCL12-206ENST00000395795 NCOA5Q9HCD5 579 aaKnown RBP18.47■□□□□ 0.55
CXCL12-206ENST00000395795 COL4A4P53420 1690 aaPredicted RBP18.47■□□□□ 0.55
CXCL12-206ENST00000395795 TRANK1O15050 2925 aa18.46■□□□□ 0.55
CXCL12-206ENST00000395795 CCDC196A0A1B0GTZ2 297 aa18.46■□□□□ 0.55
CXCL12-206ENST00000395795 KIF28PB7ZC32 967 aa18.46■□□□□ 0.55
CXCL12-206ENST00000395795 INSRRP14616 1297 aa18.46■□□□□ 0.55
CXCL12-206ENST00000395795 IFNAR1P17181 557 aa18.46■□□□□ 0.55
CXCL12-206ENST00000395795 PLCB4Q15147 1175 aa18.46■□□□□ 0.55
CXCL12-206ENST00000395795 RUFY3Q7L099 469 aa18.46■□□□□ 0.55
CXCL12-206ENST00000395795 RASGRP4Q8TDF6 673 aa18.46■□□□□ 0.55
CXCL12-206ENST00000395795 LENG9Q96B70 501 aa18.46■□□□□ 0.55
CXCL12-206ENST00000395795 NAP1L2Q9ULW6 460 aaPredicted RBP18.46■□□□□ 0.55
CXCL12-206ENST00000395795 PSMA5P28066 241 aa18.45■□□□□ 0.54
CXCL12-206ENST00000395795 ERVK-21P61565 698 aa18.45■□□□□ 0.54
CXCL12-206ENST00000395795 LPIN1Q14693 890 aa18.45■□□□□ 0.54
CXCL12-206ENST00000395795 FAM117BQ6P1L5 589 aa18.45■□□□□ 0.54
CXCL12-206ENST00000395795 TAF2Q6P1X5 1199 aa18.45■□□□□ 0.54
CXCL12-206ENST00000395795 ABHD15Q6UXT9 468 aa18.45■□□□□ 0.54
CXCL12-206ENST00000395795 PLPPR4Q7Z2D5 763 aa18.45■□□□□ 0.54
CXCL12-206ENST00000395795 TRAPPC12Q8WVT3 735 aa18.45■□□□□ 0.54
CXCL12-206ENST00000395795 GLG1Q92896 1179 aa18.45■□□□□ 0.54
CXCL12-206ENST00000395795 RNF26Q9BY78 433 aaPredicted RBP18.45■□□□□ 0.54
CXCL12-206ENST00000395795 GLT8D2Q9H1C3 349 aa18.45■□□□□ 0.54
CXCL12-206ENST00000395795 TUBE1Q9UJT0 475 aa18.45■□□□□ 0.54
CXCL12-206ENST00000395795 COL4A6Q14031 1691 aa18.44■□□□□ 0.54
CXCL12-206ENST00000395795 KAT6AQ92794 2004 aa18.44■□□□□ 0.54
CXCL12-206ENST00000395795 ATP4AP20648 1035 aa18.44■□□□□ 0.54
CXCL12-206ENST00000395795 CCT2P78371 535 aaKnown RBP18.44■□□□□ 0.54
CXCL12-206ENST00000395795 FGD1P98174 961 aa18.44■□□□□ 0.54
CXCL12-206ENST00000395795 NPY5RQ15761 445 aa18.44■□□□□ 0.54
CXCL12-206ENST00000395795 DNAJB3Q8WWF6 145 aa18.44■□□□□ 0.54
CXCL12-206ENST00000395795 SEPT8Q92599 483 aa18.44■□□□□ 0.54
CXCL12-206ENST00000395795 TOP1MTQ969P6 601 aa18.44■□□□□ 0.54
CXCL12-206ENST00000395795 UIMC1Q96RL1 719 aa18.44■□□□□ 0.54
CXCL12-206ENST00000395795 TM6SF1Q9BZW5 370 aa18.44■□□□□ 0.54
CXCL12-206ENST00000395795 SUGCTQ9HAC7 445 aa18.44■□□□□ 0.54
CXCL12-206ENST00000395795 ZBTB42B2RXF5 422 aa18.43■□□□□ 0.54
CXCL12-206ENST00000395795 LINC00271P0C7V0 271 aa18.43■□□□□ 0.54
CXCL12-206ENST00000395795 CIITAP33076 1130 aa18.43■□□□□ 0.54
CXCL12-206ENST00000395795 TJAP1Q5JTD0 557 aa18.43■□□□□ 0.54
CXCL12-206ENST00000395795 FBXO47Q5MNV8 452 aa18.43■□□□□ 0.54
CXCL12-206ENST00000395795 PLA2G4DQ86XP0 818 aa18.43■□□□□ 0.54
CXCL12-206ENST00000395795 CCDC60Q8IWA6 550 aaPredicted RBP18.43■□□□□ 0.54
CXCL12-206ENST00000395795 ATXN2LQ8WWM7 1075 aaKnown RBP18.43■□□□□ 0.54
CXCL12-206ENST00000395795 SDF4Q9BRK5 362 aa18.43■□□□□ 0.54
CXCL12-206ENST00000395795 LARP6Q9BRS8 491 aaKnown RBP18.43■□□□□ 0.54
CXCL12-206ENST00000395795 ZBED2Q9BTP6 218 aa18.43■□□□□ 0.54
CXCL12-206ENST00000395795 AGO3Q9H9G7 860 aaKnown RBP18.43■□□□□ 0.54
CXCL12-206ENST00000395795 VPS54Q9P1Q0 977 aa18.43■□□□□ 0.54
CXCL12-206ENST00000395795 THEGQ9P2T0 379 aa18.43■□□□□ 0.54
CXCL12-206ENST00000395795 MUC3AQ02505 3323 aa18.43■□□□□ 0.54
CXCL12-206ENST00000395795 AMHP03971 560 aa18.42■□□□□ 0.54
CXCL12-206ENST00000395795 GHRP10912 638 aa18.42■□□□□ 0.54
CXCL12-206ENST00000395795 STAT5BP51692 787 aa18.42■□□□□ 0.54
CXCL12-206ENST00000395795 MYOCDQ8IZQ8 938 aa18.42■□□□□ 0.54
CXCL12-206ENST00000395795 REXO1Q8N1G1 1221 aaKnown RBP18.42■□□□□ 0.54
CXCL12-206ENST00000395795 CRIPAKQ8N1N5 446 aa18.42■□□□□ 0.54
CXCL12-206ENST00000395795 GDPD5Q8WTR4 605 aa18.42■□□□□ 0.54
CXCL12-206ENST00000395795 LINC01599Q8WXQ3 324 aa18.42■□□□□ 0.54
CXCL12-206ENST00000395795 ASB2Q96Q27 587 aa18.42■□□□□ 0.54
CXCL12-206ENST00000395795 SLC26A6Q9BXS9 759 aa18.42■□□□□ 0.54
CXCL12-206ENST00000395795 IFIH1Q9BYX4 1025 aaKnown RBP18.42■□□□□ 0.54
CXCL12-206ENST00000395795 UPF3BQ9BZI7 483 aaKnown RBP18.42■□□□□ 0.54
CXCL12-206ENST00000395795 RC3H2Q9HBD1 1191 aaKnown RBP18.42■□□□□ 0.54
CXCL12-206ENST00000395795 CDY2AQ9Y6F7 541 aa18.42■□□□□ 0.54
CXCL12-206ENST00000395795 RRN3P2A6NIE6 340 aa18.41■□□□□ 0.54
CXCL12-206ENST00000395795 M0R2N6 131 aa18.41■□□□□ 0.54
CXCL12-206ENST00000395795 DDX39AO00148 427 aaKnown RBP18.41■□□□□ 0.54
CXCL12-206ENST00000395795 IPO5O00410 1097 aaKnown RBP18.41■□□□□ 0.54
CXCL12-206ENST00000395795 IGBP1P78318 339 aa18.41■□□□□ 0.54
CXCL12-206ENST00000395795 RTN4RL1Q86UN2 441 aaPredicted RBP18.41■□□□□ 0.54
CXCL12-206ENST00000395795 APBB2Q92870 758 aa18.41■□□□□ 0.54
CXCL12-206ENST00000395795 ZNF274Q96GC6 653 aaPredicted RBP18.41■□□□□ 0.54
CXCL12-206ENST00000395795 TGS1Q96RS0 853 aaKnown RBP18.41■□□□□ 0.54
CXCL12-206ENST00000395795 C17orf80Q9BSJ5 609 aa18.41■□□□□ 0.54
CXCL12-206ENST00000395795 C6orf50Q9HD87 102 aa18.41■□□□□ 0.54
CXCL12-206ENST00000395795 INSL6Q9Y581 213 aa18.41■□□□□ 0.54
CXCL12-206ENST00000395795 PCDHA2Q9Y5H9 948 aa18.41■□□□□ 0.54
CXCL12-206ENST00000395795 MRPS6P82932 125 aaKnown RBP18.4■□□□□ 0.54
CXCL12-206ENST00000395795 TFF2Q03403 129 aa18.4■□□□□ 0.54
CXCL12-206ENST00000395795 MICALL1Q8N3F8 863 aa18.4■□□□□ 0.54
CXCL12-206ENST00000395795 AIFM3Q96NN9 605 aa18.4■□□□□ 0.54
CXCL12-206ENST00000395795 AZI2Q9H6S1 392 aa18.4■□□□□ 0.54
CXCL12-206ENST00000395795 MTUS1Q9ULD2 1270 aa18.4■□□□□ 0.54
CXCL12-206ENST00000395795 XIRP2A4UGR9 3374 aa18.39■□□□□ 0.54
CXCL12-206ENST00000395795 TTC3P53804 2025 aa18.39■□□□□ 0.53
CXCL12-206ENST00000395795 POTEB3A0JP26 581 aa18.39■□□□□ 0.53
CXCL12-206ENST00000395795 ENPP3O14638 875 aa18.39■□□□□ 0.53
CXCL12-206ENST00000395795 ZNF76P36508 570 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms