RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 GTF2F1P35269 517 aaKnown RBP eCLIP22.7■■□□□ 1.22
UPK3B-203ENST00000394849 TCF7P36402 384 aaPredicted RBP22.7■■□□□ 1.22
UPK3B-203ENST00000394849 CAMK1Q14012 370 aa22.7■■□□□ 1.22
UPK3B-203ENST00000394849 IER5Q5VY09 327 aa22.7■■□□□ 1.22
UPK3B-203ENST00000394849 SMARCC2Q8TAQ2 1214 aa22.7■■□□□ 1.22
UPK3B-203ENST00000394849 TNPO1Q92973 898 aaKnown RBP22.7■■□□□ 1.22
UPK3B-203ENST00000394849 IRF2BPLQ9H1B7 796 aa22.7■■□□□ 1.22
UPK3B-203ENST00000394849 LOC730098B7Z3J9 87 aa22.69■■□□□ 1.22
UPK3B-203ENST00000394849 PIK3CDO00329 1044 aa22.69■■□□□ 1.22
UPK3B-203ENST00000394849 LINC01565O15544 149 aa22.69■■□□□ 1.22
UPK3B-203ENST00000394849 CYTH3O43739 400 aa22.69■■□□□ 1.22
UPK3B-203ENST00000394849 CBX2Q14781 532 aaPredicted RBP22.69■■□□□ 1.22
UPK3B-203ENST00000394849 SART3Q15020 963 aaKnown RBP22.69■■□□□ 1.22
UPK3B-203ENST00000394849 GRIK4Q16099 956 aa22.69■■□□□ 1.22
UPK3B-203ENST00000394849 SLC35G1Q2M3R5 365 aa22.69■■□□□ 1.22
UPK3B-203ENST00000394849 RUFY4Q6ZNE9 571 aa22.69■■□□□ 1.22
UPK3B-203ENST00000394849 NPAS4Q8IUM7 802 aa22.69■■□□□ 1.22
UPK3B-203ENST00000394849 PLEKHM2Q8IWE5 1019 aa22.69■■□□□ 1.22
UPK3B-203ENST00000394849 SPPL3Q8TCT6 385 aa22.69■■□□□ 1.22
UPK3B-203ENST00000394849 SEPT1Q8WYJ6 367 aa22.69■■□□□ 1.22
UPK3B-203ENST00000394849 GPRASP2Q96D09 838 aa22.69■■□□□ 1.22
UPK3B-203ENST00000394849 RRN3P2A6NIE6 340 aa22.68■■□□□ 1.22
UPK3B-203ENST00000394849 ZXDAP98168 799 aa22.68■■□□□ 1.22
UPK3B-203ENST00000394849 SP4Q02446 784 aa22.68■■□□□ 1.22
UPK3B-203ENST00000394849 CYB5R4Q7L1T6 521 aa22.68■■□□□ 1.22
UPK3B-203ENST00000394849 SMC5Q8IY18 1101 aa22.68■■□□□ 1.22
UPK3B-203ENST00000394849 PRSS33Q8NF86 280 aa22.68■■□□□ 1.22
UPK3B-203ENST00000394849 DNAJB3Q8WWF6 145 aa22.68■■□□□ 1.22
UPK3B-203ENST00000394849 SMARCAD1Q9H4L7 1026 aa22.68■■□□□ 1.22
UPK3B-203ENST00000394849 RNF216Q9NWF9 866 aaPredicted RBP22.68■■□□□ 1.22
UPK3B-203ENST00000394849 CLEC1BQ9P126 229 aa22.68■■□□□ 1.22
UPK3B-203ENST00000394849 CDY2AQ9Y6F7 541 aa22.68■■□□□ 1.22
UPK3B-203ENST00000394849 MRPL42Q9Y6G3 142 aaKnown RBP22.68■■□□□ 1.22
UPK3B-203ENST00000394849 ZDBF2Q9HCK1 2354 aa22.68■■□□□ 1.22
UPK3B-203ENST00000394849 M0QZ92 97 aa22.67■■□□□ 1.22
UPK3B-203ENST00000394849 IFIT3O14879 490 aaKnown RBP22.67■■□□□ 1.22
UPK3B-203ENST00000394849 ITGB1P05556 798 aa22.67■■□□□ 1.22
UPK3B-203ENST00000394849 MRPS6P82932 125 aaKnown RBP22.67■■□□□ 1.22
UPK3B-203ENST00000394849 TROAPQ12815 778 aa22.67■■□□□ 1.22
UPK3B-203ENST00000394849 CHD1LQ86WJ1 897 aa22.67■■□□□ 1.22
UPK3B-203ENST00000394849 CRIPAKQ8N1N5 446 aa22.67■■□□□ 1.22
UPK3B-203ENST00000394849 FBXL6Q8N531 539 aa22.67■■□□□ 1.22
UPK3B-203ENST00000394849 GLG1Q92896 1179 aa22.67■■□□□ 1.22
UPK3B-203ENST00000394849 CATIPQ7Z7H3 387 aa22.66■■□□□ 1.22
UPK3B-203ENST00000394849 KLHL23Q8NBE8 558 aa22.66■■□□□ 1.22
UPK3B-203ENST00000394849 PHF7Q9BWX1 381 aaPredicted RBP22.66■■□□□ 1.22
UPK3B-203ENST00000394849 U3KPZ7 1027 aaPredicted RBP22.66■■□□□ 1.22
UPK3B-203ENST00000394849 MAFGO15525 162 aa22.65■■□□□ 1.22
UPK3B-203ENST00000394849 IGHDP01880 384 aa22.65■■□□□ 1.22
UPK3B-203ENST00000394849 ATF7P17544 494 aaPredicted RBP22.65■■□□□ 1.22
UPK3B-203ENST00000394849 SMARCA1P28370 1054 aa22.65■■□□□ 1.22
UPK3B-203ENST00000394849 UBE3AQ05086 875 aa22.65■■□□□ 1.22
UPK3B-203ENST00000394849 SIGLEC14Q08ET2 396 aa22.65■■□□□ 1.22
UPK3B-203ENST00000394849 WTAPQ15007 396 aa22.65■■□□□ 1.22
UPK3B-203ENST00000394849 MARCH8Q5T0T0 291 aa22.65■■□□□ 1.22
UPK3B-203ENST00000394849 B4GALNT3Q6L9W6 998 aa22.65■■□□□ 1.22
UPK3B-203ENST00000394849 POF1BQ8WVV4 589 aa22.65■■□□□ 1.22
UPK3B-203ENST00000394849 RRP36Q96EU6 259 aaKnown RBP22.65■■□□□ 1.22
UPK3B-203ENST00000394849 MAP3K14Q99558 947 aa22.65■■□□□ 1.22
UPK3B-203ENST00000394849 AGO3Q9H9G7 860 aaKnown RBP22.65■■□□□ 1.22
UPK3B-203ENST00000394849 USP34Q70CQ2 3546 aa22.65■■□□□ 1.22
UPK3B-203ENST00000394849 KIAA1671Q9BY89 1806 aa22.64■■□□□ 1.22
UPK3B-203ENST00000394849 KCNA2P16389 499 aa22.64■■□□□ 1.21
UPK3B-203ENST00000394849 DNAJB1P25685 340 aa22.64■■□□□ 1.21
UPK3B-203ENST00000394849 CD52P31358 61 aa22.64■■□□□ 1.21
UPK3B-203ENST00000394849 NRIP1P48552 1158 aa22.64■■□□□ 1.21
UPK3B-203ENST00000394849 IER5LQ5T953 404 aa22.64■■□□□ 1.21
UPK3B-203ENST00000394849 RALYLQ86SE5 291 aaKnown RBP22.64■■□□□ 1.21
UPK3B-203ENST00000394849 CDCA3Q99618 268 aaPredicted RBP22.64■■□□□ 1.21
UPK3B-203ENST00000394849 SPZ1Q9BXG8 430 aa22.64■■□□□ 1.21
UPK3B-203ENST00000394849 TLE6Q9H808 572 aa22.64■■□□□ 1.21
UPK3B-203ENST00000394849 AAASQ9NRG9 546 aa22.64■■□□□ 1.21
UPK3B-203ENST00000394849 SEC63Q9UGP8 760 aaKnown RBP22.64■■□□□ 1.21
UPK3B-203ENST00000394849 USP15Q9Y4E8 981 aaPredicted RBP22.64■■□□□ 1.21
UPK3B-203ENST00000394849 TELO2Q9Y4R8 837 aa22.64■■□□□ 1.21
UPK3B-203ENST00000394849 GSTTP1A0A1W2PQM5 241 aa22.63■■□□□ 1.21
UPK3B-203ENST00000394849 MEIS2O14770 477 aa22.63■■□□□ 1.21
UPK3B-203ENST00000394849 CSPG5O95196 566 aa22.63■■□□□ 1.21
UPK3B-203ENST00000394849 SCG2P13521 617 aa22.63■■□□□ 1.21
UPK3B-203ENST00000394849 MARK3P27448 753 aa22.63■■□□□ 1.21
UPK3B-203ENST00000394849 KIF5BP33176 963 aa22.63■■□□□ 1.21
UPK3B-203ENST00000394849 NUCB1Q02818 461 aa22.63■■□□□ 1.21
UPK3B-203ENST00000394849 PDE12Q6L8Q7 609 aaKnown RBP22.63■■□□□ 1.21
UPK3B-203ENST00000394849 USP17L6PQ6QN14 398 aa22.63■■□□□ 1.21
UPK3B-203ENST00000394849 ADGRD2Q7Z7M1 963 aa22.63■■□□□ 1.21
UPK3B-203ENST00000394849 LINC01599Q8WXQ3 324 aa22.63■■□□□ 1.21
UPK3B-203ENST00000394849 PHOX2BQ99453 314 aa22.63■■□□□ 1.21
UPK3B-203ENST00000394849 LRFN2Q9ULH4 789 aa22.63■■□□□ 1.21
UPK3B-203ENST00000394849 PCDHB12Q9Y5F1 795 aa22.63■■□□□ 1.21
UPK3B-203ENST00000394849 TRPV2Q9Y5S1 764 aa22.63■■□□□ 1.21
UPK3B-203ENST00000394849 IGSF9BQ9UPX0 1349 aa22.62■■□□□ 1.21
UPK3B-203ENST00000394849 CACNA1HO95180 2353 aa22.62■■□□□ 1.21
UPK3B-203ENST00000394849 NUBP1P53384 320 aa22.62■■□□□ 1.21
UPK3B-203ENST00000394849 PAK2Q13177 524 aa22.62■■□□□ 1.21
UPK3B-203ENST00000394849 RTN4RL1Q86UN2 441 aaPredicted RBP22.62■■□□□ 1.21
UPK3B-203ENST00000394849 NME8Q8N427 588 aa22.62■■□□□ 1.21
UPK3B-203ENST00000394849 LZTS2Q9BRK4 669 aa22.62■■□□□ 1.21
UPK3B-203ENST00000394849 PADI3Q9ULW8 664 aa22.62■■□□□ 1.21
UPK3B-203ENST00000394849 ATP9AO75110 1047 aa22.61■■□□□ 1.21
UPK3B-203ENST00000394849 GLP2RO95838 553 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms