RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 AMHP03971 560 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 SREBF1P36956 1147 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 PKN1Q16512 942 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 PFKFB3Q16875 520 aaPredicted RBP20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 TEX2Q8IWB9 1127 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 ZNF713Q8N859 430 aaPredicted RBP20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 ADAMTS19Q8TE59 1207 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 CRYGNQ8WXF5 182 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 BRF1Q92994 677 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 TOP1MTQ969P6 601 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 CCDC136Q96JN2 1154 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 TGS1Q96RS0 853 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 C17orf80Q9BSJ5 609 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 AGXT2Q9BYV1 514 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 AGO4Q9HCK5 861 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 TUBE1Q9UJT0 475 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 NID2Q14112 1375 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 BMP1P13497 986 aa20.84■□□□□ 0.93
PDLIM7-205ENST00000393551 INSRRP14616 1297 aa20.84■□□□□ 0.93
PDLIM7-205ENST00000393551 METAP2P50579 478 aaKnown RBP eCLIP20.84■□□□□ 0.93
PDLIM7-205ENST00000393551 KCNQ1P51787 676 aa20.84■□□□□ 0.93
PDLIM7-205ENST00000393551 ACTR2P61160 394 aa20.84■□□□□ 0.93
PDLIM7-205ENST00000393551 TAF2Q6P1X5 1199 aa20.84■□□□□ 0.93
PDLIM7-205ENST00000393551 FBXL16Q8N461 479 aa20.84■□□□□ 0.93
PDLIM7-205ENST00000393551 DNAJB3Q8WWF6 145 aa20.84■□□□□ 0.93
PDLIM7-205ENST00000393551 IFIH1Q9BYX4 1025 aaKnown RBP20.84■□□□□ 0.93
PDLIM7-205ENST00000393551 NAP1L2Q9ULW6 460 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-205ENST00000393551 FAM86B1E9PN63 330 aa20.83■□□□□ 0.93
PDLIM7-205ENST00000393551 CCNE2O96020 404 aa20.83■□□□□ 0.93
PDLIM7-205ENST00000393551 FAM86B2P0C5J1 330 aa20.83■□□□□ 0.93
PDLIM7-205ENST00000393551 AP3B2Q13367 1082 aa20.83■□□□□ 0.93
PDLIM7-205ENST00000393551 LPIN1Q14693 890 aa20.83■□□□□ 0.93
PDLIM7-205ENST00000393551 SKIV2LQ15477 1246 aaKnown RBP20.83■□□□□ 0.93
PDLIM7-205ENST00000393551 JAKMIP3Q5VZ66 844 aa20.83■□□□□ 0.93
PDLIM7-205ENST00000393551 NLRC5Q86WI3 1866 aa20.83■□□□□ 0.92
PDLIM7-205ENST00000393551 IGLV3-22A0A075B6J6 115 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 TNFRSF10AO00220 468 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 DHX15O43143 795 aaKnown RBP20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 PPFIA3O75145 1194 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 UPP2O95045 317 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 ATG7O95352 703 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 GHRP10912 638 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 SCG2P13521 617 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 RPS6KB1P23443 525 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 IGBP1P78318 339 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 PLCB4Q15147 1175 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 NTRK3Q16288 839 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 BLOC1S2Q6QNY1 142 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 TRAPPC12Q8WVT3 735 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 APBB2Q92870 758 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 NECAB3Q96P71 396 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 TSPYL2Q9H2G4 693 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 LMCD1Q9NZU5 365 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 TTC3P53804 2025 aa20.82■□□□□ 0.92
PDLIM7-205ENST00000393551 MYO7AQ13402 2215 aa20.81■□□□□ 0.92
PDLIM7-205ENST00000393551 COL4A6Q14031 1691 aa20.81■□□□□ 0.92
PDLIM7-205ENST00000393551 IGKV6D-21A0A0A0MT36 114 aa20.81■□□□□ 0.92
PDLIM7-205ENST00000393551 FGD1P98174 961 aa20.81■□□□□ 0.92
PDLIM7-205ENST00000393551 FBXO47Q5MNV8 452 aa20.81■□□□□ 0.92
PDLIM7-205ENST00000393551 PLPPR4Q7Z2D5 763 aa20.81■□□□□ 0.92
PDLIM7-205ENST00000393551 PHKBQ93100 1093 aa20.81■□□□□ 0.92
PDLIM7-205ENST00000393551 SDF4Q9BRK5 362 aa20.81■□□□□ 0.92
PDLIM7-205ENST00000393551 ZMYND12Q9H0C1 365 aa20.81■□□□□ 0.92
PDLIM7-205ENST00000393551 ESYT2A0FGR8 921 aa20.8■□□□□ 0.92
PDLIM7-205ENST00000393551 PRPF3O43395 683 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-205ENST00000393551 CYP3A4P08684 503 aa20.8■□□□□ 0.92
PDLIM7-205ENST00000393551 STAT5BP51692 787 aa20.8■□□□□ 0.92
PDLIM7-205ENST00000393551 NIPA1Q7RTP0 329 aa20.8■□□□□ 0.92
PDLIM7-205ENST00000393551 UIMC1Q96RL1 719 aa20.8■□□□□ 0.92
PDLIM7-205ENST00000393551 UHRF1Q96T88 793 aaPredicted RBP20.8■□□□□ 0.92
PDLIM7-205ENST00000393551 GLT8D2Q9H1C3 349 aa20.8■□□□□ 0.92
PDLIM7-205ENST00000393551 AGO3Q9H9G7 860 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-205ENST00000393551 CDY2AQ9Y6F7 541 aa20.8■□□□□ 0.92
PDLIM7-205ENST00000393551 WDR81Q562E7 1941 aa20.79■□□□□ 0.92
PDLIM7-205ENST00000393551 EVPLQ92817 2033 aa20.79■□□□□ 0.92
PDLIM7-205ENST00000393551 CCDC196A0A1B0GTZ2 297 aa20.79■□□□□ 0.92
PDLIM7-205ENST00000393551 RRN3P2A6NIE6 340 aa20.79■□□□□ 0.92
PDLIM7-205ENST00000393551 EDIL3O43854 480 aa20.79■□□□□ 0.92
PDLIM7-205ENST00000393551 EVCP57679 992 aa20.79■□□□□ 0.92
PDLIM7-205ENST00000393551 MRPS6P82932 125 aaKnown RBP20.79■□□□□ 0.92
PDLIM7-205ENST00000393551 EPC2Q52LR7 807 aa20.79■□□□□ 0.92
PDLIM7-205ENST00000393551 ABHD15Q6UXT9 468 aa20.79■□□□□ 0.92
PDLIM7-205ENST00000393551 FAM49AQ9H0Q0 323 aaPredicted RBP20.79■□□□□ 0.92
PDLIM7-205ENST00000393551 AZI2Q9H6S1 392 aa20.79■□□□□ 0.92
PDLIM7-205ENST00000393551 RALGAPA2Q2PPJ7 1873 aa20.79■□□□□ 0.92
PDLIM7-205ENST00000393551 ATG2AQ2TAZ0 1938 aa20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 DDX39AO00148 427 aaKnown RBP20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 ENPP3O14638 875 aa20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 LINC00271P0C7V0 271 aa20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 ZNF76P36508 570 aa20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 RSPH3Q86UC2 560 aa20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 PLA2G4DQ86XP0 818 aa20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 CCDC60Q8IWA6 550 aaPredicted RBP20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 FBXO22Q8NEZ5 403 aa20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 RASGRP4Q8TDF6 673 aa20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 LINC01599Q8WXQ3 324 aa20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 HLA-CQ95604 372 aa20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 YME1L1Q96TA2 773 aa20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 RC3H2Q9HBD1 1191 aaKnown RBP20.78■□□□□ 0.92
PDLIM7-205ENST00000393551 COG5Q9UP83 839 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms