RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 MCF2L2Q86YR7 1114 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 RUSC1Q9BVN2 902 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 TANGO6Q9C0B7 1094 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 ZNF446Q9NWS9 450 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 PNMA2Q9UL42 364 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 LRRC53A6NM62 1247 aa15.77■□□□□ 0.12
MKS1-203ENST00000393120 TBCAO75347 108 aaKnown RBP15.77■□□□□ 0.12
MKS1-203ENST00000393120 RRAGAQ7L523 313 aa15.77■□□□□ 0.12
MKS1-203ENST00000393120 DYDC2Q96IM9 177 aa15.77■□□□□ 0.12
MKS1-203ENST00000393120 NACC1Q96RE7 527 aa15.77■□□□□ 0.12
MKS1-203ENST00000393120 MXRA8Q9BRK3 442 aa15.77■□□□□ 0.12
MKS1-203ENST00000393120 ZNF577Q9BSK1 485 aa15.77■□□□□ 0.12
MKS1-203ENST00000393120 LACRTQ9GZZ8 138 aa15.77■□□□□ 0.12
MKS1-203ENST00000393120 TYW1Q9NV66 732 aaKnown RBP15.77■□□□□ 0.12
MKS1-203ENST00000393120 TRIM10Q9UDY6 481 aa15.77■□□□□ 0.12
MKS1-203ENST00000393120 CCPG1Q9ULG6 757 aa15.77■□□□□ 0.12
MKS1-203ENST00000393120 MYO6Q9UM54 1294 aa15.77■□□□□ 0.12
MKS1-203ENST00000393120 ZNF263O14978 683 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 EIF3DO15371 548 aaKnown RBP eCLIP15.76■□□□□ 0.11
MKS1-203ENST00000393120 ATP8B1O43520 1251 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 NOL4O94818 638 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 NR2F2P24468 414 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 RPL13P26373 211 aaKnown RBP15.76■□□□□ 0.11
MKS1-203ENST00000393120 KIF5AQ12840 1032 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 CTTNQ14247 550 aaKnown RBP15.76■□□□□ 0.11
MKS1-203ENST00000393120 BMS1Q14692 1282 aaKnown RBP15.76■□□□□ 0.11
MKS1-203ENST00000393120 NFIL3Q16649 462 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 ASTE1Q2TB18 679 aaPredicted RBP15.76■□□□□ 0.11
MKS1-203ENST00000393120 PAPD7Q5XG87 772 aaKnown RBP15.76■□□□□ 0.11
MKS1-203ENST00000393120 TRAPPC11Q7Z392 1133 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 TPH2Q8IWU9 490 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 NEK9Q8TD19 979 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 CLEC4DQ8WXI8 215 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 ARID3AQ99856 593 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 SEL1LQ9UBV2 794 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 ANO9A1A5B4 782 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 RCCD1A6NED2 376 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 POTEB2H3BUK9 544 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 SLC16A3O15427 465 aaKnown RBP15.76■□□□□ 0.11
MKS1-203ENST00000393120 ZRANB2O95218 330 aaKnown RBP eCLIP15.76■□□□□ 0.11
MKS1-203ENST00000393120 ARP10275 920 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 TEX35Q5T0J7 233 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 CACNA2D4Q7Z3S7 1137 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 SMCR8Q8TEV9 937 aaPredicted RBP15.76■□□□□ 0.11
MKS1-203ENST00000393120 AGBL1Q96MI9 1066 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 TEKT3Q9BXF9 490 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 METTL14Q9HCE5 456 aaKnown RBP15.76■□□□□ 0.11
MKS1-203ENST00000393120 PCDHA13Q9Y5I0 950 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 LTBP3Q9NS15 1303 aa15.76■□□□□ 0.11
MKS1-203ENST00000393120 SHTN1A0MZ66 631 aa15.75■□□□□ 0.11
MKS1-203ENST00000393120 NFKBIEO00221 500 aa15.75■□□□□ 0.11
MKS1-203ENST00000393120 IPO5O00410 1097 aaKnown RBP15.75■□□□□ 0.11
MKS1-203ENST00000393120 USO1O60763 962 aaKnown RBP15.75■□□□□ 0.11
MKS1-203ENST00000393120 MYBP10242 640 aa15.75■□□□□ 0.11
MKS1-203ENST00000393120 EIF4A3P38919 411 aaKnown RBP15.75■□□□□ 0.11
MKS1-203ENST00000393120 KIF11P52732 1056 aa15.75■□□□□ 0.11
MKS1-203ENST00000393120 ZNF131P52739 623 aa15.75■□□□□ 0.11
MKS1-203ENST00000393120 TMCO3Q6UWJ1 677 aa15.75■□□□□ 0.11
MKS1-203ENST00000393120 TXLNBQ8N3L3 684 aa15.75■□□□□ 0.11
MKS1-203ENST00000393120 CCDC155Q8N6L0 562 aa15.75■□□□□ 0.11
MKS1-203ENST00000393120 SLC38A10Q9HBR0 1119 aa15.75■□□□□ 0.11
MKS1-203ENST00000393120 ARMCX3Q9UH62 379 aaPredicted RBP15.75■□□□□ 0.11
MKS1-203ENST00000393120 ODF2LQ9ULJ1 636 aa15.75■□□□□ 0.11
MKS1-203ENST00000393120 SPDYE4A6NLX3 237 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 RSPH10B2B2RC85 870 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 RBAK-RBAKDNI3L0D1 243 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 PLEKP08567 350 aaPredicted RBP15.74■□□□□ 0.11
MKS1-203ENST00000393120 RSPH10BP0C881 870 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 ZSCAN20P17040 1043 aaPredicted RBP15.74■□□□□ 0.11
MKS1-203ENST00000393120 POLD1P28340 1107 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 CBX1P83916 185 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 CYP27A1Q02318 531 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 KCNH2Q12809 1159 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 HGSNATQ68CP4 663 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 PIGOQ8TEQ8 1089 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 PARD6BQ9BYG5 372 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 IFIH1Q9BYX4 1025 aaKnown RBP15.74■□□□□ 0.11
MKS1-203ENST00000393120 UNC45AQ9H3U1 944 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 PLCB1Q9NQ66 1216 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 UBE4BO95155 1302 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 FRMPD4Q14CM0 1322 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 FER1L6Q2WGJ9 1857 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 SMCHD1A6NHR9 2005 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 CTAGE15A4D2H0 777 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 PJA2O43164 708 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 PRPF6O94906 941 aaKnown RBP15.74■□□□□ 0.11
MKS1-203ENST00000393120 FAM13AO94988 1023 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 NR3C1P04150 777 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 TUBBP07437 444 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 CTAGE8P0CG41 777 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 FDX1P10109 184 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 ITGB5P18084 799 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 UBXN2AP68543 259 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 SFMBT2Q5VUG0 894 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 CTAGE6Q86UF2 777 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 CTAGE4Q8IX94 777 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 MSANTD4Q8NCY6 345 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 LSM14BQ9BX40 385 aaKnown RBP15.74■□□□□ 0.11
MKS1-203ENST00000393120 AIPL1Q9NZN9 384 aa15.74■□□□□ 0.11
MKS1-203ENST00000393120 CHMP2AO43633 222 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms