RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ZNF526Q8TF50 670 aaPredicted RBP16.62■□□□□ 0.25
MKS1-202ENST00000393119 SPDYE5A6NIY4 337 aa16.62■□□□□ 0.25
MKS1-202ENST00000393119 ECM2O94769 699 aaPredicted RBP16.62■□□□□ 0.25
MKS1-202ENST00000393119 HOXD13P35453 343 aa16.62■□□□□ 0.25
MKS1-202ENST00000393119 SETQ01105 290 aaPredicted RBP16.62■□□□□ 0.25
MKS1-202ENST00000393119 PPATQ06203 517 aa16.62■□□□□ 0.25
MKS1-202ENST00000393119 VSIG10LQ86VR7 867 aa16.62■□□□□ 0.25
MKS1-202ENST00000393119 NCAPG2Q86XI2 1143 aa16.62■□□□□ 0.25
MKS1-202ENST00000393119 CNOT6LQ96LI5 555 aaKnown RBP16.62■□□□□ 0.25
MKS1-202ENST00000393119 ACAD9Q9H845 621 aa16.62■□□□□ 0.25
MKS1-202ENST00000393119 RRAGCQ9HB90 399 aa16.62■□□□□ 0.25
MKS1-202ENST00000393119 LRRC10BA6NIK2 292 aa16.61■□□□□ 0.25
MKS1-202ENST00000393119 CNMDO75829 334 aa16.61■□□□□ 0.25
MKS1-202ENST00000393119 PRPF6O94906 941 aaKnown RBP16.61■□□□□ 0.25
MKS1-202ENST00000393119 EYA4O95677 639 aa16.61■□□□□ 0.25
MKS1-202ENST00000393119 CYP2C8P10632 490 aa16.61■□□□□ 0.25
MKS1-202ENST00000393119 FXR1P51114 621 aaKnown RBP eCLIP16.61■□□□□ 0.25
MKS1-202ENST00000393119 UBXN1Q04323 297 aa16.61■□□□□ 0.25
MKS1-202ENST00000393119 CCDC155Q8N6L0 562 aa16.61■□□□□ 0.25
MKS1-202ENST00000393119 WDR90Q96KV7 1748 aa16.61■□□□□ 0.25
MKS1-202ENST00000393119 FRMPD4Q14CM0 1322 aa16.61■□□□□ 0.25
MKS1-202ENST00000393119 PGK2P07205 417 aa16.6■□□□□ 0.25
MKS1-202ENST00000393119 NF2P35240 595 aa16.6■□□□□ 0.25
MKS1-202ENST00000393119 SP2Q02086 613 aa16.6■□□□□ 0.25
MKS1-202ENST00000393119 EPHA7Q15375 998 aa16.6■□□□□ 0.25
MKS1-202ENST00000393119 DNTTIP2Q5QJE6 756 aaKnown RBP16.6■□□□□ 0.25
MKS1-202ENST00000393119 EEPD1Q7L9B9 569 aa16.6■□□□□ 0.25
MKS1-202ENST00000393119 TMEM139Q8IV31 216 aa16.6■□□□□ 0.25
MKS1-202ENST00000393119 MYOCDQ8IZQ8 938 aa16.6■□□□□ 0.25
MKS1-202ENST00000393119 ANKRD35Q8N283 1001 aa16.6■□□□□ 0.25
MKS1-202ENST00000393119 ZC3H15Q8WU90 426 aaKnown RBP16.6■□□□□ 0.25
MKS1-202ENST00000393119 C16orf45Q96MC5 204 aaPredicted RBP16.6■□□□□ 0.25
MKS1-202ENST00000393119 NMT1P30419 496 aaKnown RBP16.6■□□□□ 0.25
MKS1-202ENST00000393119 CASP14P31944 242 aa16.6■□□□□ 0.25
MKS1-202ENST00000393119 GSDMDP57764 484 aa16.6■□□□□ 0.25
MKS1-202ENST00000393119 MTF1Q14872 753 aa16.6■□□□□ 0.25
MKS1-202ENST00000393119 ZC2HC1CQ53FD0 456 aaPredicted RBP16.6■□□□□ 0.25
MKS1-202ENST00000393119 C1orf186Q6ZWK4 172 aa16.6■□□□□ 0.25
MKS1-202ENST00000393119 CCDC65Q8IXS2 484 aa16.6■□□□□ 0.25
MKS1-202ENST00000393119 GUF1Q8N442 669 aaKnown RBP16.6■□□□□ 0.25
MKS1-202ENST00000393119 GYPCP04921 128 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 BCRP11274 1271 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 HERVK_113P62684 666 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 IRX3P78415 501 aaPredicted RBP16.59■□□□□ 0.25
MKS1-202ENST00000393119 CBX1P83916 185 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 E4F1Q66K89 784 aaPredicted RBP16.59■□□□□ 0.25
MKS1-202ENST00000393119 RIT2Q99578 217 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 TUBGCP2Q9BSJ2 902 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 THAP9Q9H5L6 903 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 TUFT1Q9NNX1 390 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 FRMD3A2A2Y4 597 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 ATP2A1O14983 1001 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 FDX1P10109 184 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 OAZ1P54368 228 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 MIIPQ5JXC2 388 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 PLA2G4FQ68DD2 849 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 GPAT2Q6NUI2 795 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 MOV10L1Q9BXT6 1211 aaKnown RBP16.59■□□□□ 0.25
MKS1-202ENST00000393119 SPATC1LQ9H0A9 340 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 RBPJLQ9UBG7 517 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 PAPPA2Q9BXP8 1791 aa16.59■□□□□ 0.25
MKS1-202ENST00000393119 NPEPPSP55786 919 aa16.58■□□□□ 0.25
MKS1-202ENST00000393119 LRRC55Q6ZSA7 311 aa16.58■□□□□ 0.25
MKS1-202ENST00000393119 NSUN6Q8TEA1 469 aaKnown RBP16.58■□□□□ 0.25
MKS1-202ENST00000393119 LRRC27Q9C0I9 530 aa16.58■□□□□ 0.25
MKS1-202ENST00000393119 A0A0U1RQJ8 604 aa16.58■□□□□ 0.24
MKS1-202ENST00000393119 RASSF10A6NK89 507 aa16.58■□□□□ 0.24
MKS1-202ENST00000393119 CCND2P30279 289 aa16.58■□□□□ 0.24
MKS1-202ENST00000393119 SOX10P56693 466 aa16.58■□□□□ 0.24
MKS1-202ENST00000393119 FILIP1LQ4L180 1135 aa16.58■□□□□ 0.24
MKS1-202ENST00000393119 ZCWPW2Q504Y3 356 aa16.58■□□□□ 0.24
MKS1-202ENST00000393119 CCDC150Q8NCX0 1101 aa16.58■□□□□ 0.24
MKS1-202ENST00000393119 ATRIPQ8WXE1 791 aa16.58■□□□□ 0.24
MKS1-202ENST00000393119 KCTD10Q9H3F6 313 aa16.58■□□□□ 0.24
MKS1-202ENST00000393119 RBBP6Q7Z6E9 1792 aaKnown RBP16.57■□□□□ 0.24
MKS1-202ENST00000393119 PTPRFP10586 1907 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 BICDL2A1A5D9 508 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 SOWAHBA6NEL2 793 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 RBAK-RBAKDNI3L0D1 243 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 HOXA7P31268 230 aaPredicted RBP16.57■□□□□ 0.24
MKS1-202ENST00000393119 MTIF2P46199 727 aaKnown RBP16.57■□□□□ 0.24
MKS1-202ENST00000393119 WDR78Q5VTH9 848 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 SEPT14Q6ZU15 432 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 MYCT1Q8N699 235 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 MB21D1Q8N884 522 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 ZNF507Q8TCN5 953 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 CTAGE1Q96RT6 745 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 TMX1Q9H3N1 280 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 MRPL44Q9H9J2 332 aaKnown RBP16.57■□□□□ 0.24
MKS1-202ENST00000393119 GPRC5CQ9NQ84 441 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 GRIN3BO60391 1043 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 PSMD2Q13200 908 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 TMEM63BQ5T3F8 832 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 LDLRAD1Q5T700 205 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 ARMC9Q7Z3E5 817 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 DAW1Q8N136 415 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 SLC10A4Q96EP9 437 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 DESI2Q9BSY9 194 aa16.57■□□□□ 0.24
MKS1-202ENST00000393119 MAP3K20Q9NYL2 800 aaKnown RBP16.57■□□□□ 0.24
MKS1-202ENST00000393119 MAGEC2Q9UBF1 373 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms