RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 IFT20Q8IY31 132 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 GLIS3Q8NEA6 775 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 DCAF4Q8WV16 495 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 PNKPQ96T60 521 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 DUSP9Q99956 384 aaKnown RBP11.52□□□□□ -0.57
CALD1-203ENST00000393118 RIOX1Q9H6W3 641 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 ZNF446Q9NWS9 450 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 GCNT4Q9P109 453 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 PCDHAC2Q9Y5I4 1007 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 K7ENM7 598 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 FBXW10Q5XX13 1052 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 KCNK18Q7Z418 384 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 ANKS1AQ92625 1134 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 SH2D3AQ9BRG2 576 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 ODF2LQ9ULJ1 636 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 MRPL11Q9Y3B7 192 aaKnown RBP11.52□□□□□ -0.57
CALD1-203ENST00000393118 ESYT2A0FGR8 921 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 DDTLA6NHG4 134 aaPredicted RBP11.52□□□□□ -0.57
CALD1-203ENST00000393118 E2F5Q15329 346 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 FAM186BQ8IYM0 893 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 CCDC127Q96BQ5 260 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 BCS1LQ9Y276 419 aa11.52□□□□□ -0.57
CALD1-203ENST00000393118 PKD1L3Q7Z443 1732 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 H2AFZP0C0S5 128 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 GJC1P36383 396 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 SATB1Q01826 763 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 PPP1R18Q6NYC8 613 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 H2AFVQ71UI9 128 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 NIM1KQ8IY84 436 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 C4orf32Q8N8J7 132 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 SUPT20HQ8NEM7 779 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 UBLCP1Q8WVY7 318 aaPredicted RBP11.51□□□□□ -0.57
CALD1-203ENST00000393118 DYDC1Q8WWB3 177 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 GOLGA6L10A0A0M3HER8 536 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 TLDC2A0PJX2 215 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 SERPING1P05155 500 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 ACTN1P12814 892 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 FXR2P51116 673 aaKnown RBP eCLIP11.51□□□□□ -0.571e-6■■■■□ 22.7
CALD1-203ENST00000393118 LLGL1Q15334 1064 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 KCTD16Q68DU8 428 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 KCND1Q9NSA2 647 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 CTTNBP2NLQ9P2B4 639 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 FAM184BQ9ULE4 1060 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 N4BP2Q86UW6 1770 aaPredicted RBP11.51□□□□□ -0.57
CALD1-203ENST00000393118 LAMB4A4D0S4 1761 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 KLRC4O43908 158 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 RNF40O75150 1001 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 PALMO75781 387 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 TBC1D8O95759 1140 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 HARSP12081 509 aaKnown RBP11.51□□□□□ -0.57
CALD1-203ENST00000393118 SHMT1P34896 483 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 AP3B2Q13367 1082 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 ORC2Q13416 577 aaPredicted RBP11.51□□□□□ -0.57
CALD1-203ENST00000393118 CEP85LQ5SZL2 805 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 CERS5Q8N5B7 392 aa11.51□□□□□ -0.57
CALD1-203ENST00000393118 SIPA1L3O60292 1781 aaPredicted RBP11.5□□□□□ -0.57
CALD1-203ENST00000393118 SF3A3Q12874 501 aaKnown RBP eCLIP11.5□□□□□ -0.57
CALD1-203ENST00000393118 PRPF38AQ8NAV1 312 aaKnown RBP11.5□□□□□ -0.57
CALD1-203ENST00000393118 PNMA5Q96PV4 448 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 METTL14Q9HCE5 456 aaKnown RBP11.5□□□□□ -0.57
CALD1-203ENST00000393118 EPB41L5Q9HCM4 733 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 SUGT1Q9Y2Z0 365 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 CRYBG1Q9Y4K1 1723 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 ESYT3A0FGR9 886 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 POLRMTO00411 1230 aaKnown RBP11.5□□□□□ -0.57
CALD1-203ENST00000393118 NEDD9Q14511 834 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 SHROOM1Q2M3G4 852 aaPredicted RBP11.5□□□□□ -0.57
CALD1-203ENST00000393118 HHIPL2Q6UWX4 724 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 COL23A1Q86Y22 540 aaPredicted RBP11.5□□□□□ -0.57
CALD1-203ENST00000393118 PROM2Q8N271 834 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 DYDC2Q96IM9 177 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 TEKT3Q9BXF9 490 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 BLOC1S4Q9NUP1 217 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 EHD2Q9NZN4 543 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 TSKSQ9UJT2 592 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 LRRC10BA6NIK2 292 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 KRT5P13647 590 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 ATP1A2P50993 1020 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 HERVK_113P62684 666 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 APBA1Q02410 837 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 IRF2BP1Q8IU81 584 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 PARVGQ9HBI0 331 aa11.5□□□□□ -0.57
CALD1-203ENST00000393118 BAZ2AQ9UIF9 1905 aaKnown RBP11.49□□□□□ -0.57
CALD1-203ENST00000393118 HEXIM1O94992 359 aaKnown RBP11.49□□□□□ -0.57
CALD1-203ENST00000393118 SMARCA1P28370 1054 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 USP11P51784 963 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 FAM102BQ5T8I3 360 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 ALKBH5Q6P6C2 394 aaKnown RBP11.49□□□□□ -0.57
CALD1-203ENST00000393118 CCDC121Q6ZUS5 278 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 RSRC1Q96IZ7 334 aaKnown RBP11.49□□□□□ -0.57
CALD1-203ENST00000393118 DNAJC7Q99615 494 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 CEP72Q9P209 647 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 KIF1CO43896 1103 aaKnown RBP11.49□□□□□ -0.57
CALD1-203ENST00000393118 NR3C1P04150 777 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 GNGT1P63211 74 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 PAK2Q13177 524 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 KNOP1Q1ED39 458 aaKnown RBP11.49□□□□□ -0.57
CALD1-203ENST00000393118 PDXDC1Q6P996 788 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 FAM71BQ8TC56 605 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 MICAL1Q8TDZ2 1067 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms