RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 NUCKS1Q9H1E3 243 aaKnown RBP12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ODF2LQ9ULJ1 636 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 SNX14Q9Y5W7 946 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 VPS37CA5D8V6 355 aaPredicted RBP12.68□□□□□ -0.38
TRAF3IP2-208ENST00000392556 NKRFO15226 690 aaKnown RBP eCLIP12.68□□□□□ -0.38
TRAF3IP2-208ENST00000392556 TUBB2AQ13885 445 aa12.68□□□□□ -0.38
TRAF3IP2-208ENST00000392556 GPATCH4Q5T3I0 446 aaKnown RBP12.68□□□□□ -0.38
TRAF3IP2-208ENST00000392556 MFSD6Q6ZSS7 791 aa12.68□□□□□ -0.38
TRAF3IP2-208ENST00000392556 TLK2Q86UE8 772 aa12.68□□□□□ -0.38
TRAF3IP2-208ENST00000392556 FAM126BQ8IXS8 530 aa12.68□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CEP112Q8N8E3 955 aa12.68□□□□□ -0.38
TRAF3IP2-208ENST00000392556 BPIFA3Q9BQP9 254 aa12.68□□□□□ -0.38
TRAF3IP2-208ENST00000392556 TUBB2BQ9BVA1 445 aa12.68□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ANKZF1Q9H8Y5 726 aa12.68□□□□□ -0.38
TRAF3IP2-208ENST00000392556 RANBP2P49792 3224 aaKnown RBP12.68□□□□□ -0.38
TRAF3IP2-208ENST00000392556 A0A1B0GUA9 196 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 VWA3AA6NCI4 1184 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 MYADML2A6NDP7 307 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 NEFHP12036 1026 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ITGB8P26012 769 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 FSCN1Q16658 493 aaKnown RBP12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 AKNAD1Q5T1N1 836 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ISM2Q6H9L7 571 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 SRGAP1Q7Z6B7 1085 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 DGKHQ86XP1 1220 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CEP57L1Q8IYX8 460 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CCDC26Q8TAB7 109 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ESR2Q92731 530 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CDX2Q99626 313 aaPredicted RBP12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 PAIP2Q9BPZ3 127 aaKnown RBP12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 TMEM47Q9BQJ4 181 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 SLC24A3Q9HC58 644 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 SPATS2LQ9NUQ6 558 aaKnown RBP12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 POLR3EQ9NVU0 708 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CD4P01730 458 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CASP8Q14790 479 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 BRDTQ58F21 947 aaPredicted RBP12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 TMC6Q7Z403 805 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 IQCA1Q86XH1 822 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 SPATS2Q86XZ4 545 aaKnown RBP12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 DNERQ8NFT8 737 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ERCC4Q92889 916 aaPredicted RBP12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 PGBD1Q96JS3 809 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CLIC6Q96NY7 704 aa12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 BAG1Q99933 345 aaPredicted RBP12.67□□□□□ -0.38
TRAF3IP2-208ENST00000392556 A0A0D9SFI3 127 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 RBM47A0AV96 593 aaKnown RBP12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 KPNA6O60684 536 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 PRPF6O94906 941 aaKnown RBP12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 SNHG28P0DPA3 235 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 DUSP28Q4G0W2 176 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 RASIP1Q5U651 963 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 LARP1BQ659C4 914 aaKnown RBP12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 TAPT1Q6NXT6 567 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 NSMFQ6X4W1 530 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CCDC83Q8IWF9 413 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 MAGEC3Q8TD91 643 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ADCY6O43306 1168 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 NMT2O60551 498 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 SUPT20HL2P0C7V6 817 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 PDHBP11177 359 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CPT1AP50416 773 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ZNF543Q08ER8 600 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 NMIQ13287 307 aaPredicted RBP12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 KCNB2Q92953 911 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 FAM227BQ96M60 508 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 PLEKHA4Q9H4M7 779 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ABCB6Q9NP58 842 aa12.66□□□□□ -0.38
TRAF3IP2-208ENST00000392556 SMPD1P17405 629 aa12.65□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ALDH5A1P51649 535 aaPredicted RBP12.65□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CCNHP51946 323 aaPredicted RBP12.65□□□□□ -0.38
TRAF3IP2-208ENST00000392556 EPHB4P54760 987 aa12.65□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CHMP4BP1P59074 171 aa12.65□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ITGA7Q13683 1181 aa12.65□□□□□ -0.38
TRAF3IP2-208ENST00000392556 RRP12Q5JTH9 1297 aaKnown RBP12.65□□□□□ -0.38
TRAF3IP2-208ENST00000392556 IL23AQ9NPF7 189 aa12.65□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ZNF213O14771 459 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 DYNC1LI2O43237 492 aaPredicted RBP12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 RNF40O75150 1001 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 LARGE1O95461 756 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 PFKMP08237 780 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 MYBL2P10244 700 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 CCT5P48643 541 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 BAATQ14032 418 aaPredicted RBP12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 RAB30Q15771 203 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 RPUSD2Q8IZ73 545 aaKnown RBP12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 AOPEPQ8N6M6 819 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 MAFAQ8NHW3 353 aaPredicted RBP12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 ANKS1AQ92625 1134 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 TM6SF1Q9BZW5 370 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 XPO4Q9C0E2 1151 aaKnown RBP12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 ASTN1O14525 1302 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 CUTAO60888 179 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 COQ9O75208 318 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 FOSL2P15408 326 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 SLC8A3P57103 927 aa12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 PTPN11Q06124 597 aaPredicted RBP12.64□□□□□ -0.39
TRAF3IP2-208ENST00000392556 TMEM240Q5SV17 173 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms