RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 TRPC5Q9UL62 973 aaPredicted RBP17.78■□□□□ 0.44
TRA2A-202ENST00000392502 IFNAR1P17181 557 aa17.78■□□□□ 0.44
TRA2A-202ENST00000392502 HPDP32754 393 aaPredicted RBP17.78■□□□□ 0.44
TRA2A-202ENST00000392502 CYLC1P35663 651 aaPredicted RBP17.78■□□□□ 0.44
TRA2A-202ENST00000392502 PRPF4BQ13523 1007 aaKnown RBP17.78■□□□□ 0.44
TRA2A-202ENST00000392502 RTN1Q16799 776 aa17.78■□□□□ 0.44
TRA2A-202ENST00000392502 FAM182BQ5T319 152 aa17.78■□□□□ 0.44
TRA2A-202ENST00000392502 SLC51AQ86UW1 340 aa17.78■□□□□ 0.44
TRA2A-202ENST00000392502 FOXP4Q8IVH2 680 aaPredicted RBP17.78■□□□□ 0.44
TRA2A-202ENST00000392502 STKLD1Q8NE28 680 aa17.78■□□□□ 0.44
TRA2A-202ENST00000392502 PTPRN2Q92932 1015 aa17.78■□□□□ 0.44
TRA2A-202ENST00000392502 LRRC45Q96CN5 670 aa17.78■□□□□ 0.44
TRA2A-202ENST00000392502 RAB3IPQ96QF0 476 aaPredicted RBP17.78■□□□□ 0.44
TRA2A-202ENST00000392502 NUP88Q99567 741 aaPredicted RBP17.78■□□□□ 0.44
TRA2A-202ENST00000392502 NSRP1Q9H0G5 558 aaKnown RBP17.78■□□□□ 0.44
TRA2A-202ENST00000392502 ARHGEF3Q9NR81 526 aa17.78■□□□□ 0.44
TRA2A-202ENST00000392502 REXO2Q9Y3B8 237 aaKnown RBP17.78■□□□□ 0.44
TRA2A-202ENST00000392502 COL24A1Q17RW2 1714 aa17.77■□□□□ 0.44
TRA2A-202ENST00000392502 THSD7AQ9UPZ6 1657 aa17.77■□□□□ 0.44
TRA2A-202ENST00000392502 BAZ2AQ9UIF9 1905 aaKnown RBP17.77■□□□□ 0.44
TRA2A-202ENST00000392502 LRRC10BA6NIK2 292 aa17.77■□□□□ 0.44
TRA2A-202ENST00000392502 BTBD18B2RXH4 712 aa17.77■□□□□ 0.44
TRA2A-202ENST00000392502 CYP11B2P19099 503 aa17.77■□□□□ 0.44
TRA2A-202ENST00000392502 MSH2P43246 934 aa17.77■□□□□ 0.44
TRA2A-202ENST00000392502 MFSD4BQ5TF39 518 aa17.77■□□□□ 0.44
TRA2A-202ENST00000392502 ZNF653Q96CK0 615 aa17.77■□□□□ 0.44
TRA2A-202ENST00000392502 GJD4Q96KN9 370 aaPredicted RBP17.77■□□□□ 0.44
TRA2A-202ENST00000392502 TIPINQ9BVW5 301 aa17.77■□□□□ 0.44
TRA2A-202ENST00000392502 ZNHIT6Q9NWK9 470 aaKnown RBP17.77■□□□□ 0.44
TRA2A-202ENST00000392502 TUBGCP4Q9UGJ1 667 aa17.77■□□□□ 0.44
TRA2A-202ENST00000392502 KCNH3Q9ULD8 1083 aa17.77■□□□□ 0.44
TRA2A-202ENST00000392502 ATP8A1Q9Y2Q0 1164 aa17.77■□□□□ 0.44
TRA2A-202ENST00000392502 SKIV2L2P42285 1042 aaKnown RBP17.76■□□□□ 0.43
TRA2A-202ENST00000392502 CCDC15Q0P6D6 951 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 TRIM29Q14134 588 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 UBE4AQ14139 1066 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 ERMARDQ5T6L9 678 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 CEP128Q6ZU80 1094 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 RSPH1Q8WYR4 309 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 BRD8Q9H0E9 1235 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 ADAM22Q9P0K1 906 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 STK36Q9NRP7 1315 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 F8W031 263 aaPredicted RBP17.76■□□□□ 0.43
TRA2A-202ENST00000392502 PFDN1O60925 122 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 MTMR3Q13615 1198 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 AZIN2Q96A70 460 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 FAM81BQ96LP2 452 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 FAM129AQ9BZQ8 928 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 ZCWPW1Q9H0M4 648 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 ATP8A2Q9NTI2 1148 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 TUBA8Q9NY65 449 aaPredicted RBP17.76■□□□□ 0.43
TRA2A-202ENST00000392502 PLAAQ9Y263 795 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 HYOU1Q9Y4L1 999 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 COMMD3-BMI1R4GMX3 469 aa17.76■□□□□ 0.43
TRA2A-202ENST00000392502 NID2Q14112 1375 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 PRDM1O75626 825 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 HARSP12081 509 aaKnown RBP17.75■□□□□ 0.43
TRA2A-202ENST00000392502 KRT9P35527 623 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 TOB1P50616 345 aaPredicted RBP17.75■□□□□ 0.43
TRA2A-202ENST00000392502 ODF2Q5BJF6 829 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 TRIM68Q6AZZ1 485 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 ZNF654Q8IZM8 581 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 IRGQQ8WZA9 623 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 SHISA4Q96DD7 197 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 SMC6Q96SB8 1091 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 TFCP2L1Q9NZI6 479 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 LARSQ9P2J5 1176 aaKnown RBP17.75■□□□□ 0.43
TRA2A-202ENST00000392502 TSKSQ9UJT2 592 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 BARX2Q9UMQ3 279 aaPredicted RBP17.75■□□□□ 0.43
TRA2A-202ENST00000392502 NHSQ6T4R5 1651 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 MYH2Q9UKX2 1941 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 TACC1O75410 805 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 CALB2P22676 271 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 LONRF3Q496Y0 759 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 SEPT14Q6ZU15 432 aa17.75■□□□□ 0.43
TRA2A-202ENST00000392502 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.75■□□□□ 0.432e-6■■■■■ 34.8
TRA2A-202ENST00000392502 BIN2Q9UBW5 565 aaPredicted RBP17.75■□□□□ 0.43
TRA2A-202ENST00000392502 TNKSO95271 1327 aa17.74■□□□□ 0.43
TRA2A-202ENST00000392502 MMP1P03956 469 aa17.74■□□□□ 0.43
TRA2A-202ENST00000392502 RXRBP28702 533 aa17.74■□□□□ 0.43
TRA2A-202ENST00000392502 NCALDP61601 193 aa17.74■□□□□ 0.43
TRA2A-202ENST00000392502 MRPS25P82663 173 aaKnown RBP17.74■□□□□ 0.43
TRA2A-202ENST00000392502 GRIN1Q05586 938 aa17.74■□□□□ 0.43
TRA2A-202ENST00000392502 SULT2A1Q06520 285 aa17.74■□□□□ 0.43
TRA2A-202ENST00000392502 NR5A1Q13285 461 aa17.74■□□□□ 0.43
TRA2A-202ENST00000392502 SEC23AQ15436 765 aa17.74■□□□□ 0.43
TRA2A-202ENST00000392502 HSP90AA4PQ58FG1 418 aa17.74■□□□□ 0.43
TRA2A-202ENST00000392502 CAVIN4Q5BKX8 364 aa17.74■□□□□ 0.43
TRA2A-202ENST00000392502 DIS3L2Q8IYB7 885 aaKnown RBP17.74■□□□□ 0.43
TRA2A-202ENST00000392502 CRACR2BQ8N4Y2 399 aaPredicted RBP17.74■□□□□ 0.43
TRA2A-202ENST00000392502 RNF10Q8N5U6 811 aaKnown RBP17.74■□□□□ 0.43
TRA2A-202ENST00000392502 KLHL29Q96CT2 875 aa17.74■□□□□ 0.43
TRA2A-202ENST00000392502 XPO6Q96QU8 1125 aaKnown RBP17.74■□□□□ 0.43
TRA2A-202ENST00000392502 RPS6KC1Q96S38 1066 aa17.74■□□□□ 0.43
TRA2A-202ENST00000392502 QTRT2Q9H974 415 aaKnown RBP17.74■□□□□ 0.43
TRA2A-202ENST00000392502 LIMA1Q9UHB6 759 aaKnown RBP17.74■□□□□ 0.43
TRA2A-202ENST00000392502 JAG2Q9Y219 1238 aa17.74■□□□□ 0.43
TRA2A-202ENST00000392502 hCG_1642624A0A1W2PR95 340 aa17.74■□□□□ 0.43
TRA2A-202ENST00000392502 GSTT1P30711 240 aa17.74■□□□□ 0.43
TRA2A-202ENST00000392502 PEX5P50542 639 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms