RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 VPS18Q9P253 973 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 NXF1Q9UBU9 619 aaKnown RBP18.01■□□□□ 0.47
SNX9-201ENST00000392185 PNMA3Q9UL41 463 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 MRC1P22897 1456 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 XRN1Q8IZH2 1706 aaKnown RBP18.01■□□□□ 0.47
SNX9-201ENST00000392185 LGALS16A8MUM7 142 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 VEGFAP15692 232 aaPredicted RBP18.01■□□□□ 0.47
SNX9-201ENST00000392185 TUBB4BP68371 445 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 NBPF12Q5TAG4 269 aaPredicted RBP18.01■□□□□ 0.47
SNX9-201ENST00000392185 THNSL1Q8IYQ7 743 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 UBLCP1Q8WVY7 318 aaPredicted RBP18.01■□□□□ 0.47
SNX9-201ENST00000392185 LPAR1Q92633 364 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 TEX13BQ9BXU2 312 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 IKBKGQ9Y6K9 419 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 NDUFA10O95299 355 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 NR3C1P04150 777 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 CXCR5P32302 372 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 SHMT1P34896 483 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 KRT76Q01546 638 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 DLG5Q8TDM6 1919 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 MYMKA6NI61 221 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 RGL2O15211 777 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 CAP2P40123 477 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 PDE6CP51160 858 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 PDIA5Q14554 519 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 ANKRD40Q6AI12 368 aa18.01■□□□□ 0.47
SNX9-201ENST00000392185 SLC37A4O43826 429 aa18■□□□□ 0.47
SNX9-201ENST00000392185 NMT1P30419 496 aaKnown RBP18■□□□□ 0.47
SNX9-201ENST00000392185 MAP2K1Q02750 393 aaPredicted RBP18■□□□□ 0.47
SNX9-201ENST00000392185 CYFIP1Q7L576 1253 aa18■□□□□ 0.47
SNX9-201ENST00000392185 GUF1Q8N442 669 aaKnown RBP18■□□□□ 0.47
SNX9-201ENST00000392185 PHLDB2Q86SQ0 1253 aa18■□□□□ 0.47
SNX9-201ENST00000392185 MAK16Q9BXY0 300 aaKnown RBP18■□□□□ 0.47
SNX9-201ENST00000392185 NHEJ1Q9H9Q4 299 aaPredicted RBP18■□□□□ 0.47
SNX9-201ENST00000392185 ASIC3Q9UHC3 531 aa18■□□□□ 0.47
SNX9-201ENST00000392185 GCLMP48507 274 aa18■□□□□ 0.47
SNX9-201ENST00000392185 JAK3P52333 1124 aa18■□□□□ 0.47
SNX9-201ENST00000392185 ORC2Q13416 577 aaPredicted RBP18■□□□□ 0.47
SNX9-201ENST00000392185 NAP1L3Q99457 506 aaPredicted RBP18■□□□□ 0.47
SNX9-201ENST00000392185 PAIP2Q9BPZ3 127 aaKnown RBP18■□□□□ 0.47
SNX9-201ENST00000392185 MTRF1LQ9UGC7 380 aaKnown RBP18■□□□□ 0.47
SNX9-201ENST00000392185 SALL1Q9NSC2 1324 aa18■□□□□ 0.47
SNX9-201ENST00000392185 ACTN4O43707 911 aaKnown RBP17.99■□□□□ 0.47
SNX9-201ENST00000392185 TUBBP07437 444 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 VPS41P49754 854 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 LACTBP83111 547 aaPredicted RBP17.99■□□□□ 0.47
SNX9-201ENST00000392185 TUBB2AQ13885 445 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 MESDQ14696 234 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 ZNF365Q70YC5 407 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 TUBB2BQ9BVA1 445 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 AP5M1Q9H0R1 490 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 KCNH2Q12809 1159 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 TFDP1Q14186 410 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 SYCE1Q8N0S2 351 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 TUBE1Q9UJT0 475 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 TTC26A0AVF1 554 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 DPYDQ12882 1025 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 KNOP1Q1ED39 458 aaKnown RBP17.99■□□□□ 0.47
SNX9-201ENST00000392185 SLC30A10Q6XR72 485 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 SND1Q7KZF4 910 aaKnown RBP eCLIP17.99■□□□□ 0.474e-6■□□□□ 9.8
SNX9-201ENST00000392185 CCDC105Q8IYK2 499 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 BBXQ8WY36 941 aaPredicted RBP17.99■□□□□ 0.47
SNX9-201ENST00000392185 HYOU1Q9Y4L1 999 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 PCDHB4Q9Y5E5 795 aa17.99■□□□□ 0.47
SNX9-201ENST00000392185 NR3C2P08235 984 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 RHBDL3P58872 404 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 PTK2Q05397 1052 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 HDXQ7Z353 690 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 PROCA1Q8NCQ7 364 aaPredicted RBP17.98■□□□□ 0.47
SNX9-201ENST00000392185 MRRFQ96E11 262 aaKnown RBP17.98■□□□□ 0.47
SNX9-201ENST00000392185 BPIFA3Q9BQP9 254 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 DENND3A2RUS2 1198 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 ZEB2O60315 1214 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 NLRP7Q8WX94 980 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 A0A1W2PRG0 241 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 TRIM49P0CI25 452 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 TRIM49CP0CI26 452 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 FERP16591 822 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 CD58P19256 250 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 TAF12Q16514 161 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 LONRF2Q1L5Z9 754 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 ATRIPQ8WXE1 791 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 JPH2Q9BR39 696 aaPredicted RBP17.98■□□□□ 0.47
SNX9-201ENST00000392185 ATP2A1O14983 1001 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 KIF11P52732 1056 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 RPS6P62753 249 aaKnown RBP17.98■□□□□ 0.47
SNX9-201ENST00000392185 KIF22Q14807 665 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 EPHA7Q15375 998 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 TOGARAM2Q6ZUX3 1019 aa17.98■□□□□ 0.47
SNX9-201ENST00000392185 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.98■□□□□ 0.47
SNX9-201ENST00000392185 FTCDO95954 541 aa17.97■□□□□ 0.47
SNX9-201ENST00000392185 RNF187Q5TA31 235 aaPredicted RBP17.97■□□□□ 0.47
SNX9-201ENST00000392185 RNF34Q969K3 372 aa17.97■□□□□ 0.47
SNX9-201ENST00000392185 FAM163AQ96GL9 167 aaPredicted RBP17.97■□□□□ 0.47
SNX9-201ENST00000392185 OPA1O60313 960 aa17.97■□□□□ 0.47
SNX9-201ENST00000392185 RPS12P25398 132 aaKnown RBP17.97■□□□□ 0.47
SNX9-201ENST00000392185 MFAP3P55082 362 aa17.97■□□□□ 0.47
SNX9-201ENST00000392185 PCDHA10Q9Y5I2 948 aa17.97■□□□□ 0.47
SNX9-201ENST00000392185 ESYT2A0FGR8 921 aa17.97■□□□□ 0.47
SNX9-201ENST00000392185 USP27XA6NNY8 438 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms