RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 EDEM3Q9BZQ6 932 aa21.1■□□□□ 0.97
ERCC2-203ENST00000391944 NHEJ1Q9H9Q4 299 aaPredicted RBP21.1■□□□□ 0.97
ERCC2-203ENST00000391944 OLFML3Q9NRN5 406 aa21.1■□□□□ 0.97
ERCC2-203ENST00000391944 PNMA2Q9UL42 364 aa21.1■□□□□ 0.97
ERCC2-203ENST00000391944 CETN3O15182 167 aa21.1■□□□□ 0.97
ERCC2-203ENST00000391944 EPHB6O15197 1021 aa21.1■□□□□ 0.97
ERCC2-203ENST00000391944 ERCC3P19447 782 aa21.1■□□□□ 0.97
ERCC2-203ENST00000391944 KRT83P78385 493 aa21.1■□□□□ 0.97
ERCC2-203ENST00000391944 SPP2Q13103 211 aa21.1■□□□□ 0.97
ERCC2-203ENST00000391944 SCYL3Q8IZE3 742 aa21.1■□□□□ 0.97
ERCC2-203ENST00000391944 MNS1Q8NEH6 495 aa21.1■□□□□ 0.97
ERCC2-203ENST00000391944 DOCK1Q14185 1865 aa21.1■□□□□ 0.97
ERCC2-203ENST00000391944 ZNF541Q9H0D2 1346 aa21.09■□□□□ 0.97
ERCC2-203ENST00000391944 PDXKO00764 312 aa21.09■□□□□ 0.97
ERCC2-203ENST00000391944 FDX1P10109 184 aa21.09■□□□□ 0.97
ERCC2-203ENST00000391944 ERCC6LQ2NKX8 1250 aa21.09■□□□□ 0.97
ERCC2-203ENST00000391944 MUM1L1Q5H9M0 696 aa21.09■□□□□ 0.97
ERCC2-203ENST00000391944 ZNF662Q6ZS27 426 aa21.09■□□□□ 0.97
ERCC2-203ENST00000391944 RPAP3Q9H6T3 665 aaPredicted RBP21.09■□□□□ 0.97
ERCC2-203ENST00000391944 FAM184BQ9ULE4 1060 aa21.09■□□□□ 0.97
ERCC2-203ENST00000391944 EIF3CLB5ME19 914 aaKnown RBP21.09■□□□□ 0.97
ERCC2-203ENST00000391944 MYBP10242 640 aa21.09■□□□□ 0.97
ERCC2-203ENST00000391944 BACE1P56817 501 aa21.09■□□□□ 0.97
ERCC2-203ENST00000391944 KCNMA1Q12791 1236 aa21.09■□□□□ 0.97
ERCC2-203ENST00000391944 PCNX4Q63HM2 1172 aa21.09■□□□□ 0.97
ERCC2-203ENST00000391944 ARHGAP27Q6ZUM4 889 aa21.09■□□□□ 0.97
ERCC2-203ENST00000391944 SYTL5Q8TDW5 730 aaPredicted RBP21.09■□□□□ 0.97
ERCC2-203ENST00000391944 EIF3CQ99613 913 aaKnown RBP21.09■□□□□ 0.97
ERCC2-203ENST00000391944 HAUS4Q9H6D7 363 aa21.09■□□□□ 0.97
ERCC2-203ENST00000391944 KCNH7Q9NS40 1196 aa21.09■□□□□ 0.97
ERCC2-203ENST00000391944 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.09■□□□□ 0.97
ERCC2-203ENST00000391944 ZBTB39O15060 712 aa21.08■□□□□ 0.97
ERCC2-203ENST00000391944 ZBED4O75132 1171 aa21.08■□□□□ 0.97
ERCC2-203ENST00000391944 NR2F2P24468 414 aa21.08■□□□□ 0.97
ERCC2-203ENST00000391944 HERVK_113P62684 666 aa21.08■□□□□ 0.97
ERCC2-203ENST00000391944 APOBEC3FQ8IUX4 373 aaKnown RBP21.08■□□□□ 0.97
ERCC2-203ENST00000391944 NEK11Q8NG66 645 aa21.08■□□□□ 0.97
ERCC2-203ENST00000391944 IL31RAQ8NI17 732 aa21.08■□□□□ 0.97
ERCC2-203ENST00000391944 UBIAD1Q9Y5Z9 338 aa21.08■□□□□ 0.97
ERCC2-203ENST00000391944 FRMPD4Q14CM0 1322 aa21.08■□□□□ 0.96
ERCC2-203ENST00000391944 TADA3O75528 432 aa21.07■□□□□ 0.96
ERCC2-203ENST00000391944 PRPF6O94906 941 aaKnown RBP21.07■□□□□ 0.96
ERCC2-203ENST00000391944 SLC35F6Q8N357 371 aa21.07■□□□□ 0.96
ERCC2-203ENST00000391944 CCDC155Q8N6L0 562 aa21.07■□□□□ 0.96
ERCC2-203ENST00000391944 NEK9Q8TD19 979 aa21.07■□□□□ 0.96
ERCC2-203ENST00000391944 AS3MTQ9HBK9 375 aa21.07■□□□□ 0.96
ERCC2-203ENST00000391944 WRAP73Q9P2S5 460 aaPredicted RBP21.07■□□□□ 0.96
ERCC2-203ENST00000391944 EFCAB8A8MWE9 144 aa21.07■□□□□ 0.96
ERCC2-203ENST00000391944 CALUO43852 315 aaPredicted RBP21.07■□□□□ 0.96
ERCC2-203ENST00000391944 ANGEL2Q5VTE6 544 aaKnown RBP21.07■□□□□ 0.96
ERCC2-203ENST00000391944 ZNF280CQ8ND82 737 aa21.07■□□□□ 0.96
ERCC2-203ENST00000391944 SMCR8Q8TEV9 937 aaPredicted RBP21.07■□□□□ 0.96
ERCC2-203ENST00000391944 BAP1Q92560 729 aa21.07■□□□□ 0.96
ERCC2-203ENST00000391944 ZKSCAN4Q969J2 545 aaPredicted RBP21.07■□□□□ 0.96
ERCC2-203ENST00000391944 HOMER2Q9NSB8 354 aa21.07■□□□□ 0.96
ERCC2-203ENST00000391944 KCND2Q9NZV8 630 aa21.07■□□□□ 0.96
ERCC2-203ENST00000391944 CTDP1Q9Y5B0 961 aaPredicted RBP21.07■□□□□ 0.96
ERCC2-203ENST00000391944 CTAGE9A4FU28 777 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 FAM13AO94988 1023 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 PTPRAP18433 802 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 RPS6P62753 249 aaKnown RBP21.06■□□□□ 0.96
ERCC2-203ENST00000391944 MRPS9P82933 396 aaKnown RBP21.06■□□□□ 0.96
ERCC2-203ENST00000391944 TUBB2AQ13885 445 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 TKFCQ3LXA3 575 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 UBXN4Q92575 508 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 TUBB2BQ9BVA1 445 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 BCAS3Q9H6U6 928 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 POLD4Q9HCU8 107 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 TYW1Q9NV66 732 aaKnown RBP21.06■□□□□ 0.96
ERCC2-203ENST00000391944 SFI1A8K8P3 1242 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 VWA5AO00534 786 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 DHX15O43143 795 aaKnown RBP21.06■□□□□ 0.96
ERCC2-203ENST00000391944 GCNT3O95395 438 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 FRMD5Q7Z6J6 570 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 WRNIP1Q96S55 665 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 LXNQ9BS40 222 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 JADE2Q9NQC1 790 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 PICK1Q9NRD5 415 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 PARP14Q460N5 1801 aa21.06■□□□□ 0.96
ERCC2-203ENST00000391944 EIF3DO15371 548 aaKnown RBP eCLIP21.05■□□□□ 0.962e-7■□□□□ 8.6
ERCC2-203ENST00000391944 IPO7O95373 1038 aaKnown RBP21.05■□□□□ 0.96
ERCC2-203ENST00000391944 PPP2R3AQ06190 1150 aa21.05■□□□□ 0.96
ERCC2-203ENST00000391944 CCDC42Q96M95 316 aa21.05■□□□□ 0.96
ERCC2-203ENST00000391944 TAAR1Q96RJ0 339 aa21.05■□□□□ 0.96
ERCC2-203ENST00000391944 PARVGQ9HBI0 331 aa21.05■□□□□ 0.96
ERCC2-203ENST00000391944 AGO4Q9HCK5 861 aaKnown RBP21.05■□□□□ 0.96
ERCC2-203ENST00000391944 SEL1LQ9UBV2 794 aa21.05■□□□□ 0.96
ERCC2-203ENST00000391944 LOXHD1Q8IVV2 1947 aa21.05■□□□□ 0.96
ERCC2-203ENST00000391944 ZNF131P52739 623 aa21.05■□□□□ 0.96
ERCC2-203ENST00000391944 PRAMEF18Q5VWM3 479 aa21.05■□□□□ 0.96
ERCC2-203ENST00000391944 RRAGAQ7L523 313 aa21.05■□□□□ 0.96
ERCC2-203ENST00000391944 MYCT1Q8N699 235 aa21.05■□□□□ 0.96
ERCC2-203ENST00000391944 NLGN2Q8NFZ4 835 aa21.05■□□□□ 0.96
ERCC2-203ENST00000391944 TRERF1Q96PN7 1200 aa21.05■□□□□ 0.96
ERCC2-203ENST00000391944 ARHGAP20Q9P2F6 1191 aa21.05■□□□□ 0.96
ERCC2-203ENST00000391944 ODF2LQ9ULJ1 636 aa21.05■□□□□ 0.96
ERCC2-203ENST00000391944 GUCA1BQ9UMX6 200 aa21.05■□□□□ 0.96
ERCC2-203ENST00000391944 LRRC53A6NM62 1247 aa21.04■□□□□ 0.96
ERCC2-203ENST00000391944 MIER3Q7Z3K6 550 aa21.04■□□□□ 0.96
ERCC2-203ENST00000391944 CACNA2D4Q7Z3S7 1137 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms