RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 CCDC40Q4G0X9 1142 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 WDR59Q6PJI9 974 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 EPM2AIP1Q7L775 607 aaPredicted RBP20.12■□□□□ 0.81
ACTN4-202ENST00000390009 ZNF710Q8N1W2 664 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 TAAR1Q96RJ0 339 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 WDR24Q96S15 920 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 WRAP73Q9P2S5 460 aaPredicted RBP20.12■□□□□ 0.81
ACTN4-202ENST00000390009 ZNF215Q9UL58 517 aaPredicted RBP20.12■□□□□ 0.81
ACTN4-202ENST00000390009 SIK3Q9Y2K2 1263 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 UBIAD1Q9Y5Z9 338 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 A0A0U1RQJ8 604 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 A0A1W2PQJ5 194 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 DDX39AO00148 427 aaKnown RBP20.11■□□□□ 0.81
ACTN4-202ENST00000390009 ZBTB39O15060 712 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 MRPS9P82933 396 aaKnown RBP20.11■□□□□ 0.81
ACTN4-202ENST00000390009 EDRF1Q3B7T1 1238 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 TKFCQ3LXA3 575 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 ZC3H3Q8IXZ2 948 aaKnown RBP20.11■□□□□ 0.81
ACTN4-202ENST00000390009 ATRIPQ8WXE1 791 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 IQCDQ96DY2 449 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 C12orf42Q96LP6 360 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 NACC1Q96RE7 527 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 PKD2L1Q9P0L9 805 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 SLU7O95391 586 aaKnown RBP20.11■□□□□ 0.81
ACTN4-202ENST00000390009 GNA14O95837 355 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 MEA1Q16626 185 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 RNF207Q6ZRF8 634 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 C1orf186Q6ZWK4 172 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 LXNQ9BS40 222 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 POLD4Q9HCU8 107 aa20.11■□□□□ 0.81
ACTN4-202ENST00000390009 C19orf81C9J6K1 198 aa20.1■□□□□ 0.81
ACTN4-202ENST00000390009 MYBP10242 640 aa20.1■□□□□ 0.81
ACTN4-202ENST00000390009 EIF2AK2P19525 551 aaKnown RBP20.1■□□□□ 0.81
ACTN4-202ENST00000390009 MARSP56192 900 aaKnown RBP20.1■□□□□ 0.81
ACTN4-202ENST00000390009 PGM5Q15124 567 aa20.1■□□□□ 0.81
ACTN4-202ENST00000390009 KNOP1Q1ED39 458 aaKnown RBP20.1■□□□□ 0.81
ACTN4-202ENST00000390009 JADE2Q9NQC1 790 aa20.1■□□□□ 0.81
ACTN4-202ENST00000390009 EPN1Q9Y6I3 576 aaPredicted RBP20.1■□□□□ 0.81
ACTN4-202ENST00000390009 NDUFA10O95299 355 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 GAP43P17677 238 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 CASQ1P31415 396 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 HOXD13P35453 343 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 NCBP1Q09161 790 aaKnown RBP20.09■□□□□ 0.81
ACTN4-202ENST00000390009 ADAM9Q13443 819 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 NSMFQ6X4W1 530 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 BANK1Q8NDB2 785 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 ZNF397Q8NF99 534 aaPredicted RBP20.09■□□□□ 0.81
ACTN4-202ENST00000390009 NEK9Q8TD19 979 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 BCAS3Q9H6U6 928 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 AGO4Q9HCK5 861 aaKnown RBP20.09■□□□□ 0.81
ACTN4-202ENST00000390009 OLFML3Q9NRN5 406 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 RNF146Q9NTX7 359 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 TRAF3IP3Q9Y228 551 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 RIPK3Q9Y572 518 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 DHX15O43143 795 aaKnown RBP20.09■□□□□ 0.81
ACTN4-202ENST00000390009 PRPF6O94906 941 aaKnown RBP20.09■□□□□ 0.81
ACTN4-202ENST00000390009 FAM13AO94988 1023 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 MTMR1Q13613 665 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 MIER3Q7Z3K6 550 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 RMDN3Q96TC7 470 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 IRX2Q9BZI1 471 aaPredicted RBP20.09■□□□□ 0.81
ACTN4-202ENST00000390009 FAM207AQ9NSI2 230 aaPredicted RBP20.09■□□□□ 0.81
ACTN4-202ENST00000390009 ZNHIT6Q9NWK9 470 aaKnown RBP20.09■□□□□ 0.81
ACTN4-202ENST00000390009 WDR90Q96KV7 1748 aa20.09■□□□□ 0.81
ACTN4-202ENST00000390009 SFI1A8K8P3 1242 aa20.08■□□□□ 0.81
ACTN4-202ENST00000390009 URI1O94763 535 aaPredicted RBP20.08■□□□□ 0.81
ACTN4-202ENST00000390009 GCNT3O95395 438 aa20.08■□□□□ 0.81
ACTN4-202ENST00000390009 NR2F2P24468 414 aa20.08■□□□□ 0.81
ACTN4-202ENST00000390009 DSG3P32926 999 aa20.08■□□□□ 0.81
ACTN4-202ENST00000390009 ITGB3BPQ13352 177 aaPredicted RBP20.08■□□□□ 0.81
ACTN4-202ENST00000390009 BMT2Q1RMZ1 405 aa20.08■□□□□ 0.81
ACTN4-202ENST00000390009 SUPT20HL1Q3ZLR7 823 aa20.08■□□□□ 0.81
ACTN4-202ENST00000390009 NOL9Q5SY16 702 aaKnown RBP20.08■□□□□ 0.81
ACTN4-202ENST00000390009 TRIM59Q8IWR1 403 aa20.08■□□□□ 0.81
ACTN4-202ENST00000390009 REPS2Q8NFH8 660 aa20.08■□□□□ 0.81
ACTN4-202ENST00000390009 ERO1AQ96HE7 468 aa20.08■□□□□ 0.81
ACTN4-202ENST00000390009 MMRN2Q9H8L6 949 aa20.08■□□□□ 0.81
ACTN4-202ENST00000390009 PXMP2Q9NR77 195 aa20.08■□□□□ 0.81
ACTN4-202ENST00000390009 CETN3O15182 167 aa20.08■□□□□ 0.8
ACTN4-202ENST00000390009 EPHB6O15197 1021 aa20.08■□□□□ 0.8
ACTN4-202ENST00000390009 NAA30Q147X3 362 aaPredicted RBP20.08■□□□□ 0.8
ACTN4-202ENST00000390009 ARHGAP29Q52LW3 1261 aa20.08■□□□□ 0.8
ACTN4-202ENST00000390009 ANKRD7Q92527 254 aa20.08■□□□□ 0.8
ACTN4-202ENST00000390009 PDCD2LQ9BRP1 358 aa20.08■□□□□ 0.8
ACTN4-202ENST00000390009 KCND2Q9NZV8 630 aa20.08■□□□□ 0.8
ACTN4-202ENST00000390009 ADAMTS5Q9UNA0 930 aa20.08■□□□□ 0.8
ACTN4-202ENST00000390009 PDXKO00764 312 aa20.07■□□□□ 0.8
ACTN4-202ENST00000390009 KIF5CO60282 957 aa20.07■□□□□ 0.8
ACTN4-202ENST00000390009 MYCLP12524 364 aaPredicted RBP20.07■□□□□ 0.8
ACTN4-202ENST00000390009 OAZ1P54368 228 aa20.07■□□□□ 0.8
ACTN4-202ENST00000390009 PRKG1Q13976 671 aa20.07■□□□□ 0.8
ACTN4-202ENST00000390009 SNRNP48Q6IEG0 339 aaKnown RBP20.07■□□□□ 0.8
ACTN4-202ENST00000390009 MYCT1Q8N699 235 aa20.07■□□□□ 0.8
ACTN4-202ENST00000390009 CCDC155Q8N6L0 562 aa20.07■□□□□ 0.8
ACTN4-202ENST00000390009 PURBQ96QR8 312 aaKnown RBP20.07■□□□□ 0.8
ACTN4-202ENST00000390009 CALUO43852 315 aaPredicted RBP20.06■□□□□ 0.8
ACTN4-202ENST00000390009 COG2Q14746 738 aa20.06■□□□□ 0.8
ACTN4-202ENST00000390009 ARHGEF16Q5VV41 709 aa20.06■□□□□ 0.8
ACTN4-202ENST00000390009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.06■□□□□ 0.8
ACTN4-202ENST00000390009 SMCR8Q8TEV9 937 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms