RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ATXN2LQ8WWM7 1075 aaKnown RBP16.32■□□□□ 0.2
VLDLR-202ENST00000382099 KCNK9Q9NPC2 374 aa16.32■□□□□ 0.2
VLDLR-202ENST00000382099 KLHL14Q9P2G3 628 aa16.32■□□□□ 0.2
VLDLR-202ENST00000382099 PMS1P54277 932 aaKnown RBP16.32■□□□□ 0.2
VLDLR-202ENST00000382099 CCDC15Q0P6D6 951 aa16.32■□□□□ 0.2
VLDLR-202ENST00000382099 ZNF174Q15697 407 aa16.32■□□□□ 0.2
VLDLR-202ENST00000382099 SH2D4BQ5SQS7 431 aa16.32■□□□□ 0.2
VLDLR-202ENST00000382099 IRF2BP1Q8IU81 584 aa16.32■□□□□ 0.2
VLDLR-202ENST00000382099 MB21D2Q8IYB1 491 aaPredicted RBP16.32■□□□□ 0.2
VLDLR-202ENST00000382099 CSGALNACT2Q8N6G5 542 aa16.32■□□□□ 0.2
VLDLR-202ENST00000382099 OXER1Q8TDS5 423 aa16.32■□□□□ 0.2
VLDLR-202ENST00000382099 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.32■□□□□ 0.2
VLDLR-202ENST00000382099 NPHP3-ACAD11A0A0J9YXS1 232 aa16.31■□□□□ 0.2
VLDLR-202ENST00000382099 FAM205CA6NFA0 338 aa16.31■□□□□ 0.2
VLDLR-202ENST00000382099 PDLIM1O00151 329 aa16.31■□□□□ 0.2
VLDLR-202ENST00000382099 RANBP6O60518 1105 aaKnown RBP16.31■□□□□ 0.2
VLDLR-202ENST00000382099 SPATA31D3P0C874 917 aa16.31■□□□□ 0.2
VLDLR-202ENST00000382099 TIMM10P62072 90 aa16.31■□□□□ 0.2
VLDLR-202ENST00000382099 SETDB1Q15047 1291 aa16.31■□□□□ 0.2
VLDLR-202ENST00000382099 SPATA31D4Q6ZUB0 917 aa16.31■□□□□ 0.2
VLDLR-202ENST00000382099 CENPTQ96BT3 561 aa16.31■□□□□ 0.2
VLDLR-202ENST00000382099 UNC45AQ9H3U1 944 aa16.31■□□□□ 0.2
VLDLR-202ENST00000382099 LRCH1Q9Y2L9 728 aa16.31■□□□□ 0.2
VLDLR-202ENST00000382099 SH2B2O14492 632 aaPredicted RBP16.31■□□□□ 0.2
VLDLR-202ENST00000382099 TARSP26639 723 aaKnown RBP16.31■□□□□ 0.2
VLDLR-202ENST00000382099 ARID5AQ03989 594 aa16.31■□□□□ 0.2
VLDLR-202ENST00000382099 PTF1AQ7RTS3 328 aa16.31■□□□□ 0.2
VLDLR-202ENST00000382099 ZNF579Q8NAF0 562 aaKnown RBP16.31■□□□□ 0.2
VLDLR-202ENST00000382099 ASAP3Q8TDY4 903 aa16.31■□□□□ 0.2
VLDLR-202ENST00000382099 TBX22Q9Y458 520 aa16.31■□□□□ 0.2
VLDLR-202ENST00000382099 PXDNQ92626 1479 aa16.31■□□□□ 0.2
VLDLR-202ENST00000382099 PLS1Q14651 629 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.3■□□□□ 0.2
VLDLR-202ENST00000382099 C1orf141Q5JVX7 400 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 APOA5Q6Q788 366 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.3■□□□□ 0.2
VLDLR-202ENST00000382099 TRIM22Q8IYM9 498 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 DTX3LQ8TDB6 740 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 ARHGEF2Q92974 986 aaKnown RBP16.3■□□□□ 0.2
VLDLR-202ENST00000382099 GOLPH3Q9H4A6 298 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 HAO1Q9UJM8 370 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 LMO7Q8WWI1 1683 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 MYH13Q9UKX3 1938 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 RNF113AO15541 343 aaKnown RBP16.3■□□□□ 0.2
VLDLR-202ENST00000382099 PRPF4BQ13523 1007 aaKnown RBP16.3■□□□□ 0.2
VLDLR-202ENST00000382099 MAP7Q14244 749 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 TMC3Q7Z5M5 1100 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 NBPF15Q8N660 670 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 USP38Q8NB14 1042 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 CTNNBL1Q8WYA6 563 aaPredicted RBP16.3■□□□□ 0.2
VLDLR-202ENST00000382099 OSBP2Q969R2 916 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 CELF4Q9BZC1 486 aaKnown RBP16.3■□□□□ 0.2
VLDLR-202ENST00000382099 NLRC4Q9NPP4 1024 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 ARL2BPQ9Y2Y0 163 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 MAGEA13PA6NCF6 341 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.3■□□□□ 0.2
VLDLR-202ENST00000382099 E2F6O75461 281 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 MMP1P03956 469 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 IFIT1P09914 478 aaKnown RBP16.3■□□□□ 0.2
VLDLR-202ENST00000382099 SRGNP10124 158 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 DENND2CQ68D51 928 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 DPY19L2Q6NUT2 758 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 KSR2Q6VAB6 950 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 ARHGAP18Q8N392 663 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 PPFIBP2Q8ND30 876 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 SCG3Q8WXD2 468 aaKnown RBP16.3■□□□□ 0.2
VLDLR-202ENST00000382099 IP6K1Q92551 441 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 ARHGEF1Q92888 912 aaKnown RBP16.3■□□□□ 0.2
VLDLR-202ENST00000382099 PTPRN2Q92932 1015 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 HAUS1Q96CS2 278 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 RMDN2Q96LZ7 410 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 STOML1Q9UBI4 398 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 DAAM1Q9Y4D1 1078 aa16.3■□□□□ 0.2
VLDLR-202ENST00000382099 B4E1Z4 1266 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 RPN1P04843 607 aaKnown RBP16.29■□□□□ 0.2
VLDLR-202ENST00000382099 GM2AP17900 193 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 ECHS1P30084 290 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 MAP7D3Q8IWC1 876 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 STAG2Q8N3U4 1231 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 FAM13CQ8NE31 585 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 ZNF507Q8TCN5 953 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 RMND1Q9NWS8 449 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 KRIT1O00522 736 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 ALOX15P16050 662 aaPredicted RBP16.29■□□□□ 0.2
VLDLR-202ENST00000382099 RPL13P26373 211 aaKnown RBP16.29■□□□□ 0.2
VLDLR-202ENST00000382099 SERPINB3P29508 390 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 GALNTL6Q49A17 601 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 EPHA10Q5JZY3 1008 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 ZNF658Q5TYW1 1059 aaPredicted RBP16.29■□□□□ 0.2
VLDLR-202ENST00000382099 TSHZ1Q6ZSZ6 1077 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 PLIN2Q99541 437 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 RXFP1Q9HBX9 757 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 XDHP47989 1333 aa16.29■□□□□ 0.2
VLDLR-202ENST00000382099 TTI1O43156 1089 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 TJP3O95049 919 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 BAG3O95817 575 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 PENKP01210 267 aaPredicted RBP16.28■□□□□ 0.2
VLDLR-202ENST00000382099 EEF1GP26641 437 aaKnown RBP16.28■□□□□ 0.2
VLDLR-202ENST00000382099 ADCY1Q08828 1119 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 MAP7D1Q3KQU3 841 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms