RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 JPH1Q9HDC5 661 aaPredicted RBP16.18■□□□□ 0.18
SHOX-202ENST00000381575 ERAP1Q9NZ08 941 aa16.18■□□□□ 0.18
SHOX-202ENST00000381575 SLC9A2Q9UBY0 812 aa16.18■□□□□ 0.18
SHOX-202ENST00000381575 TUBE1Q9UJT0 475 aa16.18■□□□□ 0.18
SHOX-202ENST00000381575 RALGAPA2Q2PPJ7 1873 aa16.18■□□□□ 0.18
SHOX-202ENST00000381575 TTC3P53804 2025 aa16.18■□□□□ 0.18
SHOX-202ENST00000381575 DDX39AO00148 427 aaKnown RBP16.17■□□□□ 0.18
SHOX-202ENST00000381575 CAND2O75155 1236 aa16.17■□□□□ 0.18
SHOX-202ENST00000381575 METAP2P50579 478 aaKnown RBP eCLIP16.17■□□□□ 0.18
SHOX-202ENST00000381575 FAM26DQ5JW98 314 aa16.17■□□□□ 0.18
SHOX-202ENST00000381575 MARCH8Q5T0T0 291 aa16.17■□□□□ 0.18
SHOX-202ENST00000381575 JAKMIP3Q5VZ66 844 aa16.17■□□□□ 0.18
SHOX-202ENST00000381575 PPP1R18Q6NYC8 613 aa16.17■□□□□ 0.18
SHOX-202ENST00000381575 BRF1Q92994 677 aa16.17■□□□□ 0.18
SHOX-202ENST00000381575 CCDC136Q96JN2 1154 aa16.17■□□□□ 0.18
SHOX-202ENST00000381575 FAM49AQ9H0Q0 323 aaPredicted RBP16.17■□□□□ 0.18
SHOX-202ENST00000381575 SMARCAD1Q9H4L7 1026 aa16.17■□□□□ 0.18
SHOX-202ENST00000381575 BARHL2Q9NY43 387 aa16.17■□□□□ 0.18
SHOX-202ENST00000381575 INSL6Q9Y581 213 aa16.17■□□□□ 0.18
SHOX-202ENST00000381575 SNX14Q9Y5W7 946 aa16.17■□□□□ 0.18
SHOX-202ENST00000381575 KIAA1671Q9BY89 1806 aa16.17■□□□□ 0.18
SHOX-202ENST00000381575 INSRRP14616 1297 aa16.16■□□□□ 0.18
SHOX-202ENST00000381575 ACTR2P61160 394 aa16.16■□□□□ 0.18
SHOX-202ENST00000381575 HTRA4P83105 476 aaPredicted RBP16.16■□□□□ 0.18
SHOX-202ENST00000381575 MGAT3Q09327 533 aa16.16■□□□□ 0.18
SHOX-202ENST00000381575 LPIN1Q14693 890 aa16.16■□□□□ 0.18
SHOX-202ENST00000381575 CEP55Q53EZ4 464 aa16.16■□□□□ 0.18
SHOX-202ENST00000381575 FBXO22Q8NEZ5 403 aa16.16■□□□□ 0.18
SHOX-202ENST00000381575 YME1L1Q96TA2 773 aa16.16■□□□□ 0.18
SHOX-202ENST00000381575 TRPC6Q9Y210 931 aa16.16■□□□□ 0.18
SHOX-202ENST00000381575 C5orf42Q9H799 3197 aa16.16■□□□□ 0.18
SHOX-202ENST00000381575 BMP1P13497 986 aa16.15■□□□□ 0.18
SHOX-202ENST00000381575 ZNF76P36508 570 aa16.15■□□□□ 0.18
SHOX-202ENST00000381575 CLK2P49760 499 aaKnown RBP16.15■□□□□ 0.18
SHOX-202ENST00000381575 TMEM62Q0P6H9 643 aa16.15■□□□□ 0.18
SHOX-202ENST00000381575 PHKBQ93100 1093 aa16.15■□□□□ 0.18
SHOX-202ENST00000381575 TOP1MTQ969P6 601 aa16.15■□□□□ 0.18
SHOX-202ENST00000381575 SDF4Q9BRK5 362 aa16.15■□□□□ 0.18
SHOX-202ENST00000381575 AGO4Q9HCK5 861 aaKnown RBP16.15■□□□□ 0.18
SHOX-202ENST00000381575 CDY2AQ9Y6F7 541 aa16.15■□□□□ 0.18
SHOX-202ENST00000381575 MBLAC1A4D2B0 266 aaPredicted RBP16.14■□□□□ 0.17
SHOX-202ENST00000381575 CCNE2O96020 404 aa16.14■□□□□ 0.17
SHOX-202ENST00000381575 FOSP01100 380 aaPredicted RBP16.14■□□□□ 0.17
SHOX-202ENST00000381575 HMGB1P09429 215 aaKnown RBP16.14■□□□□ 0.17
SHOX-202ENST00000381575 SCG2P13521 617 aa16.14■□□□□ 0.17
SHOX-202ENST00000381575 SREBF1P36956 1147 aa16.14■□□□□ 0.17
SHOX-202ENST00000381575 PLCB4Q15147 1175 aa16.14■□□□□ 0.17
SHOX-202ENST00000381575 PFKFB3Q16875 520 aaPredicted RBP16.14■□□□□ 0.17
SHOX-202ENST00000381575 TAF2Q6P1X5 1199 aa16.14■□□□□ 0.17
SHOX-202ENST00000381575 BLOC1S2Q6QNY1 142 aa16.14■□□□□ 0.17
SHOX-202ENST00000381575 SP7Q8TDD2 431 aaPredicted RBP16.14■□□□□ 0.17
SHOX-202ENST00000381575 RASGRP4Q8TDF6 673 aa16.14■□□□□ 0.17
SHOX-202ENST00000381575 KCNB2Q92953 911 aa16.14■□□□□ 0.17
SHOX-202ENST00000381575 HLA-CQ95604 372 aa16.14■□□□□ 0.17
SHOX-202ENST00000381575 AZI2Q9H6S1 392 aa16.14■□□□□ 0.17
SHOX-202ENST00000381575 NFASCO94856 1347 aa16.14■□□□□ 0.17
SHOX-202ENST00000381575 FAM86B1E9PN63 330 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 hCG_1984214I3L0E3 225 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 MEIS1O00470 390 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 MAFGO15525 162 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 FAM86B2P0C5J1 330 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 HSPA4P34932 840 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 MRPS6P82932 125 aaKnown RBP16.13■□□□□ 0.17
SHOX-202ENST00000381575 AP3B2Q13367 1082 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 EPC2Q52LR7 807 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 FBXO47Q5MNV8 452 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 RSPH3Q86UC2 560 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 PLA2G4DQ86XP0 818 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 ZNF713Q8N859 430 aaPredicted RBP16.13■□□□□ 0.17
SHOX-202ENST00000381575 APBB2Q92870 758 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 AGO3Q9H9G7 860 aaKnown RBP16.13■□□□□ 0.17
SHOX-202ENST00000381575 NCOA5Q9HCD5 579 aaKnown RBP16.13■□□□□ 0.17
SHOX-202ENST00000381575 COL4A6Q14031 1691 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 IBSPP21815 317 aaPredicted RBP16.13■□□□□ 0.17
SHOX-202ENST00000381575 RPS6KB1P23443 525 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 CD52P31358 61 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 STAT5BP51692 787 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 PKN1Q16512 942 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 AAK1Q2M2I8 961 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 RPAINQ86UA6 219 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 LINC01599Q8WXQ3 324 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 COG5Q9UP83 839 aa16.13■□□□□ 0.17
SHOX-202ENST00000381575 POTEB3A0JP26 581 aa16.12■□□□□ 0.17
SHOX-202ENST00000381575 BACH1O14867 736 aa16.12■□□□□ 0.17
SHOX-202ENST00000381575 CSPG5O95196 566 aa16.12■□□□□ 0.17
SHOX-202ENST00000381575 RCAN1P53805 252 aa16.12■□□□□ 0.17
SHOX-202ENST00000381575 CCT2P78371 535 aaKnown RBP16.12■□□□□ 0.17
SHOX-202ENST00000381575 POTEBQ6S5H4 581 aa16.12■□□□□ 0.17
SHOX-202ENST00000381575 TRMT1LQ7Z2T5 733 aaKnown RBP16.12■□□□□ 0.17
SHOX-202ENST00000381575 CCDC60Q8IWA6 550 aaPredicted RBP16.12■□□□□ 0.17
SHOX-202ENST00000381575 IGLV3-22A0A075B6J6 115 aa16.11■□□□□ 0.17
SHOX-202ENST00000381575 CCDC196A0A1B0GTZ2 297 aa16.11■□□□□ 0.17
SHOX-202ENST00000381575 RRN3P2A6NIE6 340 aa16.11■□□□□ 0.17
SHOX-202ENST00000381575 TSHZ1Q6ZSZ6 1077 aa16.11■□□□□ 0.17
SHOX-202ENST00000381575 TMEM192Q8IY95 271 aa16.11■□□□□ 0.17
SHOX-202ENST00000381575 REXO1Q8N1G1 1221 aaKnown RBP16.11■□□□□ 0.17
SHOX-202ENST00000381575 LARP6Q9BRS8 491 aaKnown RBP16.11■□□□□ 0.17
SHOX-202ENST00000381575 SLC26A6Q9BXS9 759 aa16.11■□□□□ 0.17
SHOX-202ENST00000381575 LMCD1Q9NZU5 365 aa16.11■□□□□ 0.17
SHOX-202ENST00000381575 NID2Q14112 1375 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms