RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 C12orf60Q5U649 245 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 EMBQ6PCB8 327 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 SEPT12Q8IYM1 358 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 ENGASEQ8NFI3 743 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 TUBE1Q9UJT0 475 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 MAD1L1Q9Y6D9 718 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 TFAMQ00059 246 aaKnown RBP18.58■□□□□ 0.57
SGCB-201ENST00000381431 QRICH1Q2TAL8 776 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 ANKRD40Q6AI12 368 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 RNF169Q8NCN4 708 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 TCP11Q8WWU5 503 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 RAD54LQ92698 747 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 PLA2G12BQ9BX93 195 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 NRBP2Q9NSY0 501 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 HPS5Q9UPZ3 1129 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 PPRC1Q5VV67 1664 aaKnown RBP18.58■□□□□ 0.57
SGCB-201ENST00000381431 CEMIPQ8WUJ3 1361 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 AKR1B1P15121 316 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 DYNLT1P63172 113 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 MICAL1Q8TDZ2 1067 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 HESX1Q9UBX0 185 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 SNX24Q9Y343 169 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 SYNJ2BP-COX16A0A087WUM0 186 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 H7C0C1 242 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 ECEL1O95672 775 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 NR3C1P04150 777 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 CRKP46108 304 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 ATP5OP48047 213 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 OSTNP61366 133 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 YWHAGP61981 247 aaKnown RBP eCLIP18.58■□□□□ 0.56
SGCB-201ENST00000381431 LMNTD2Q8IXW0 634 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 NEDD1Q8NHV4 660 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 COX16Q9P0S2 106 aa18.58■□□□□ 0.56
SGCB-201ENST00000381431 ATP1A1P05023 1023 aaKnown RBP18.57■□□□□ 0.56
SGCB-201ENST00000381431 CD58P19256 250 aa18.57■□□□□ 0.56
SGCB-201ENST00000381431 GCLMP48507 274 aa18.57■□□□□ 0.56
SGCB-201ENST00000381431 CCDC197Q8NCU1 140 aa18.57■□□□□ 0.56
SGCB-201ENST00000381431 TBC1D31Q96DN5 1066 aa18.57■□□□□ 0.56
SGCB-201ENST00000381431 TRIM9Q9C026 710 aa18.57■□□□□ 0.56
SGCB-201ENST00000381431 MRFAP1Q9Y605 127 aa18.57■□□□□ 0.56
SGCB-201ENST00000381431 SGK1O00141 431 aa18.57■□□□□ 0.56
SGCB-201ENST00000381431 GBP1P32455 592 aa18.57■□□□□ 0.56
SGCB-201ENST00000381431 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
SGCB-201ENST00000381431 GUF1Q8N442 669 aaKnown RBP18.57■□□□□ 0.56
SGCB-201ENST00000381431 ADPGKQ9BRR6 497 aa18.57■□□□□ 0.56
SGCB-201ENST00000381431 F5H6K3 240 aa18.57■□□□□ 0.56
SGCB-201ENST00000381431 PHBP35232 272 aa18.57■□□□□ 0.56
SGCB-201ENST00000381431 KLRC3Q07444 240 aa18.57■□□□□ 0.56
SGCB-201ENST00000381431 PTPRUQ92729 1446 aa18.57■□□□□ 0.56
SGCB-201ENST00000381431 VSNL1P62760 191 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 NEK9Q8TD19 979 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 WHAMMQ8TF30 809 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 CEP72Q9P209 647 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 MAP2K2P36507 400 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 GGCXP38435 758 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 MRPS9P82933 396 aaKnown RBP18.56■□□□□ 0.56
SGCB-201ENST00000381431 DR1Q01658 176 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 SESTD1Q86VW0 696 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 ANAPC4Q9UJX5 808 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 LMTK2Q8IWU2 1503 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 ANO9A1A5B4 782 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 SPATS2Q86XZ4 545 aaKnown RBP18.56■□□□□ 0.56
SGCB-201ENST00000381431 PHF20Q9BVI0 1012 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 DDX47Q9H0S4 455 aaKnown RBP18.56■□□□□ 0.56
SGCB-201ENST00000381431 A0A1B0GTH6 734 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 HIP1RO75146 1068 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 STK4Q13043 487 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 TSNAXIP1Q2TAA8 658 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 ALS2CLQ60I27 953 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 RAD9BQ6WBX8 426 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 ADGRF4Q8IZF3 695 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 ATP2A3Q93084 1043 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 OSBPL9Q96SU4 736 aa18.56■□□□□ 0.56
SGCB-201ENST00000381431 ADD3Q9UEY8 706 aaKnown RBP18.56■□□□□ 0.56
SGCB-201ENST00000381431 TNS3Q68CZ2 1445 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 NCOA3Q9Y6Q9 1424 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 TXNDC9O14530 226 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 PPM1FP49593 454 aaPredicted RBP18.55■□□□□ 0.56
SGCB-201ENST00000381431 RASSF2P50749 326 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 E2F5Q15329 346 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 C10orf76Q5T2E6 689 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 ZNF341Q9BYN7 854 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 AGPAT5Q9NUQ2 364 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 SUN1O94901 812 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 ACSL3O95573 720 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 NPR1P16066 1061 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 NFIXQ14938 502 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 ARHGAP24Q8N264 748 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 TC2NQ8N9U0 490 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 LRRC8CQ8TDW0 803 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 ANAPC5Q9UJX4 755 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 C21orf2O43822 256 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 ZNF211Q13398 564 aaPredicted RBP18.55■□□□□ 0.56
SGCB-201ENST00000381431 ZNF746Q6NUN9 644 aaPredicted RBP18.55■□□□□ 0.56
SGCB-201ENST00000381431 KRT27Q7Z3Y8 459 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 PROM2Q8N271 834 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 APOL6Q9BWW8 343 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.55■□□□□ 0.56
SGCB-201ENST00000381431 TRIM10Q9UDY6 481 aa18.55■□□□□ 0.56
SGCB-201ENST00000381431 CAPN9O14815 690 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms