RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 ZNF211Q13398 564 aaPredicted RBP12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 USH1GQ495M9 461 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 RHOT2Q8IXI1 618 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 NUDCD1Q96RS6 583 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 NUF2Q9BZD4 464 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 VCPKMTQ9H867 229 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 EHD2Q9NZN4 543 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 FAM187AA6NFU0 413 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 GSG1L2A8MUP6 293 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 MIF4GDA9UHW6 222 aaKnown RBP12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 CHN1P15882 459 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 CD44P16070 742 aaKnown RBP12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 PDE1CQ14123 709 aaPredicted RBP12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 TRPM8Q7Z2W7 1104 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 LRRC47Q8N1G4 583 aaKnown RBP12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 CCDC127Q96BQ5 260 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 DUSP10Q9Y6W6 482 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 IQGAP1P46940 1657 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 PLA2G4BP0C869 781 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 BRD2P25440 801 aaKnown RBP12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 KAZNQ674X7 775 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 PPP4R3CPQ6ZMV5 832 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 NLRP10Q86W26 655 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 DDX42Q86XP3 938 aaKnown RBP eCLIP12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 VTI1AQ96AJ9 217 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 ANGPTL2Q9UKU9 493 aa12.4□□□□□ -0.42
THUMPD1-201ENST00000381337 ANKARQ7Z5J8 1434 aa12.4□□□□□ -0.43
THUMPD1-201ENST00000381337 GYG2O15488 501 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 HARSP12081 509 aaKnown RBP12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 MAPK4P31152 587 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 RFC1P35251 1148 aaPredicted RBP12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 EZH2Q15910 746 aaKnown RBP12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 TRIM9Q9C026 710 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 SENP2Q9HC62 589 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 RASA4BC9J798 803 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 DDX39AO00148 427 aaKnown RBP12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 SNAP23O00161 211 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 RASA4O43374 803 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 RPS6KA5O75582 802 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 CCND1P24385 295 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 AARSP49588 968 aaKnown RBP eCLIP12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 CCDC14Q49A88 953 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 DGKHQ86XP1 1220 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 TAB3Q8N5C8 712 aaPredicted RBP12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 ATP2A3Q93084 1043 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 PIGSQ96S52 555 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 CCSER1Q9C0I3 900 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 SEC31BQ9NQW1 1179 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 SH3GLB2Q9NR46 395 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 ARL2BPQ9Y2Y0 163 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 RABGAP1Q9Y3P9 1069 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 SYNGAP1Q96PV0 1343 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 CREB3O43889 395 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 GAS7O60861 476 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 CFBP00751 764 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 MYCNP04198 464 aaPredicted RBP12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 TPD52P55327 224 aaPredicted RBP12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 FOXO4P98177 505 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 SLC18A3Q16572 532 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 DBN1Q16643 649 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 ODR4Q5SWX8 454 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 OGFOD1Q8N543 542 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 TGS1Q96RS0 853 aaKnown RBP12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 IWS1Q96ST2 819 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 IRAK4Q9NWZ3 460 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 USP15Q9Y4E8 981 aaPredicted RBP12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 INO80Q9ULG1 1556 aaPredicted RBP12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 TCP11X1B4DZS4 312 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 TTI1O43156 1089 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 SLC8A3P57103 927 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 ABTB1Q969K4 478 aaPredicted RBP12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 EHD4Q9H223 541 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 CCDC87Q9NVE4 849 aa12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
THUMPD1-201ENST00000381337 STXBP3O00186 592 aa12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 PPP1R12AO14974 1030 aaPredicted RBP12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 RHOBTB3O94955 611 aa12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 INHBAP08476 426 aa12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 RWDD2BP57060 319 aa12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 STK4Q13043 487 aa12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 DYNC1I2Q13409 638 aaKnown RBP12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 USP17L2Q6R6M4 530 aa12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 SPATA21Q7Z572 469 aa12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 ST13P4Q8IZP2 240 aaPredicted RBP12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 SYT2Q8N9I0 419 aaPredicted RBP12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 COA7Q96BR5 231 aa12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 CENPKQ9BS16 269 aa12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 ISCUQ9H1K1 167 aa12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 PRPF6O94906 941 aaKnown RBP12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 AGTP01019 485 aa12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 NSFP46459 744 aaKnown RBP12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 DDB1Q16531 1140 aa12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 CDKAL1Q5VV42 579 aa12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 PROCA1Q8NCQ7 364 aaPredicted RBP12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 PPP4R1Q8TF05 950 aa12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 CYTH2Q99418 400 aa12.38□□□□□ -0.43
THUMPD1-201ENST00000381337 MAP3K14Q99558 947 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms