RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 AZI2Q9H6S1 392 aa18.35■□□□□ 0.53
VCX3A-201ENST00000381089 TELO2Q9Y4R8 837 aa18.35■□□□□ 0.53
VCX3A-201ENST00000381089 CDY2AQ9Y6F7 541 aa18.35■□□□□ 0.53
VCX3A-201ENST00000381089 MYO7AQ13402 2215 aa18.34■□□□□ 0.53
VCX3A-201ENST00000381089 POTEB3A0JP26 581 aa18.34■□□□□ 0.53
VCX3A-201ENST00000381089 MBLAC1A4D2B0 266 aaPredicted RBP18.34■□□□□ 0.53
VCX3A-201ENST00000381089 C19orf67A6NJJ6 358 aa18.34■□□□□ 0.53
VCX3A-201ENST00000381089 GRM6O15303 877 aa18.34■□□□□ 0.53
VCX3A-201ENST00000381089 MMP1P03956 469 aa18.34■□□□□ 0.53
VCX3A-201ENST00000381089 CALM1P0DP23 149 aa18.34■□□□□ 0.53
VCX3A-201ENST00000381089 CALM2P0DP24 149 aa18.34■□□□□ 0.53
VCX3A-201ENST00000381089 CALM3P0DP25 149 aa18.34■□□□□ 0.53
VCX3A-201ENST00000381089 ANTXR2P58335 489 aa18.34■□□□□ 0.53
VCX3A-201ENST00000381089 MRPS6P82932 125 aaKnown RBP18.34■□□□□ 0.53
VCX3A-201ENST00000381089 SMAD2Q15796 467 aaKnown RBP18.34■□□□□ 0.53
VCX3A-201ENST00000381089 CTC1Q2NKJ3 1217 aa18.34■□□□□ 0.53
VCX3A-201ENST00000381089 POTEBQ6S5H4 581 aa18.34■□□□□ 0.53
VCX3A-201ENST00000381089 MYL10Q9BUA6 226 aa18.34■□□□□ 0.53
VCX3A-201ENST00000381089 RC3H2Q9HBD1 1191 aaKnown RBP18.34■□□□□ 0.53
VCX3A-201ENST00000381089 LY9Q9HBG7 655 aa18.34■□□□□ 0.53
VCX3A-201ENST00000381089 SQORQ9Y6N5 450 aa18.34■□□□□ 0.53
VCX3A-201ENST00000381089 GSTTP1A0A1W2PQM5 241 aa18.33■□□□□ 0.52
VCX3A-201ENST00000381089 SGSM2O43147 1006 aa18.33■□□□□ 0.52
VCX3A-201ENST00000381089 ATP9AO75110 1047 aa18.33■□□□□ 0.52
VCX3A-201ENST00000381089 DGKIO75912 1065 aa18.33■□□□□ 0.52
VCX3A-201ENST00000381089 STAG3L1P0CL83 205 aa18.33■□□□□ 0.52
VCX3A-201ENST00000381089 LTBRP36941 435 aa18.33■□□□□ 0.52
VCX3A-201ENST00000381089 IGBP1P78318 339 aa18.33■□□□□ 0.52
VCX3A-201ENST00000381089 HYAL1Q12794 435 aa18.33■□□□□ 0.52
VCX3A-201ENST00000381089 SMAD4Q13485 552 aaKnown RBP18.33■□□□□ 0.52
VCX3A-201ENST00000381089 CLUL1Q15846 466 aa18.33■□□□□ 0.52
VCX3A-201ENST00000381089 NAALADL2Q58DX5 795 aa18.33■□□□□ 0.52
VCX3A-201ENST00000381089 P2RX5Q93086 422 aa18.33■□□□□ 0.52
VCX3A-201ENST00000381089 ZNF689Q96CS4 500 aaPredicted RBP18.33■□□□□ 0.52
VCX3A-201ENST00000381089 IGFLR1Q9H665 355 aa18.33■□□□□ 0.52
VCX3A-201ENST00000381089 PKD2L1Q9P0L9 805 aa18.33■□□□□ 0.52
VCX3A-201ENST00000381089 TTC3P53804 2025 aa18.33■□□□□ 0.52
VCX3A-201ENST00000381089 PRC1O43663 620 aa18.32■□□□□ 0.52
VCX3A-201ENST00000381089 LINC00271P0C7V0 271 aa18.32■□□□□ 0.52
VCX3A-201ENST00000381089 ITGB5P18084 799 aa18.32■□□□□ 0.52
VCX3A-201ENST00000381089 PDE4AP27815 886 aa18.32■□□□□ 0.52
VCX3A-201ENST00000381089 MCM5P33992 734 aa18.32■□□□□ 0.52
VCX3A-201ENST00000381089 IRX6P78412 446 aaPredicted RBP18.32■□□□□ 0.52
VCX3A-201ENST00000381089 ALYREFQ86V81 257 aaKnown RBP18.32■□□□□ 0.52
VCX3A-201ENST00000381089 NPAS4Q8IUM7 802 aa18.32■□□□□ 0.52
VCX3A-201ENST00000381089 CMTR2Q8IYT2 770 aaKnown RBP18.32■□□□□ 0.52
VCX3A-201ENST00000381089 MAP4K1Q92918 833 aa18.32■□□□□ 0.52
VCX3A-201ENST00000381089 TMEM87BQ96K49 555 aa18.32■□□□□ 0.52
VCX3A-201ENST00000381089 FAM49AQ9H0Q0 323 aaPredicted RBP18.32■□□□□ 0.52
VCX3A-201ENST00000381089 JPH1Q9HDC5 661 aaPredicted RBP18.32■□□□□ 0.52
VCX3A-201ENST00000381089 JADE2Q9NQC1 790 aa18.32■□□□□ 0.52
VCX3A-201ENST00000381089 CD207Q9UJ71 328 aa18.32■□□□□ 0.52
VCX3A-201ENST00000381089 TRPC6Q9Y210 931 aa18.32■□□□□ 0.52
VCX3A-201ENST00000381089 RBM8AQ9Y5S9 174 aaKnown RBP18.32■□□□□ 0.52
VCX3A-201ENST00000381089 UBIAD1Q9Y5Z9 338 aa18.32■□□□□ 0.52
VCX3A-201ENST00000381089 TAF6LQ9Y6J9 622 aa18.32■□□□□ 0.52
VCX3A-201ENST00000381089 MBTPS2O43462 519 aa18.31■□□□□ 0.52
VCX3A-201ENST00000381089 CSPG5O95196 566 aa18.31■□□□□ 0.52
VCX3A-201ENST00000381089 PLEKHA8P1O95397 391 aa18.31■□□□□ 0.52
VCX3A-201ENST00000381089 INSRRP14616 1297 aa18.31■□□□□ 0.52
VCX3A-201ENST00000381089 CD52P31358 61 aa18.31■□□□□ 0.52
VCX3A-201ENST00000381089 IRS1P35568 1242 aa18.31■□□□□ 0.52
VCX3A-201ENST00000381089 NDUFV1P49821 464 aa18.31■□□□□ 0.52
VCX3A-201ENST00000381089 MARCH8Q5T0T0 291 aa18.31■□□□□ 0.52
VCX3A-201ENST00000381089 SRBD1Q8N5C6 995 aaKnown RBP18.31■□□□□ 0.52
VCX3A-201ENST00000381089 MFSD14AQ96MC6 490 aa18.31■□□□□ 0.52
VCX3A-201ENST00000381089 SDF4Q9BRK5 362 aa18.31■□□□□ 0.52
VCX3A-201ENST00000381089 ALG13Q9NP73 1137 aaKnown RBP18.31■□□□□ 0.52
VCX3A-201ENST00000381089 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
VCX3A-201ENST00000381089 SLC9A2Q9UBY0 812 aa18.31■□□□□ 0.52
VCX3A-201ENST00000381089 PLAGL2Q9UPG8 496 aa18.31■□□□□ 0.52
VCX3A-201ENST00000381089 TRPV2Q9Y5S1 764 aa18.31■□□□□ 0.52
VCX3A-201ENST00000381089 PAK2Q13177 524 aa18.3■□□□□ 0.52
VCX3A-201ENST00000381089 UBE2SQ16763 222 aa18.3■□□□□ 0.52
VCX3A-201ENST00000381089 FAM43BQ6ZT52 329 aaPredicted RBP18.3■□□□□ 0.52
VCX3A-201ENST00000381089 LRFN2Q9ULH4 789 aa18.3■□□□□ 0.52
VCX3A-201ENST00000381089 PCDHA6Q9UN73 950 aa18.3■□□□□ 0.52
VCX3A-201ENST00000381089 PCDHA8Q9Y5H6 950 aa18.3■□□□□ 0.52
VCX3A-201ENST00000381089 SLC12A7Q9Y666 1083 aa18.3■□□□□ 0.52
VCX3A-201ENST00000381089 STXBP3O00186 592 aa18.29■□□□□ 0.52
VCX3A-201ENST00000381089 SH2B2O14492 632 aaPredicted RBP18.29■□□□□ 0.52
VCX3A-201ENST00000381089 LIFRP42702 1097 aa18.29■□□□□ 0.52
VCX3A-201ENST00000381089 DLX2Q07687 328 aaPredicted RBP18.29■□□□□ 0.52
VCX3A-201ENST00000381089 HEATR3Q7Z4Q2 680 aa18.29■□□□□ 0.52
VCX3A-201ENST00000381089 AGO3Q9H9G7 860 aaKnown RBP18.29■□□□□ 0.52
VCX3A-201ENST00000381089 PCDHA2Q9Y5H9 948 aa18.29■□□□□ 0.52
VCX3A-201ENST00000381089 MRPL42Q9Y6G3 142 aaKnown RBP18.29■□□□□ 0.52
VCX3A-201ENST00000381089 ATG2AQ2TAZ0 1938 aa18.28■□□□□ 0.52
VCX3A-201ENST00000381089 TBX10O75333 385 aa18.28■□□□□ 0.52
VCX3A-201ENST00000381089 SCG2P13521 617 aa18.28■□□□□ 0.52
VCX3A-201ENST00000381089 ADAM15Q13444 863 aa18.28■□□□□ 0.52
VCX3A-201ENST00000381089 HERC4Q5GLZ8 1057 aaPredicted RBP18.28■□□□□ 0.52
VCX3A-201ENST00000381089 SYNE3Q6ZMZ3 975 aa18.28■□□□□ 0.52
VCX3A-201ENST00000381089 PLPPR4Q7Z2D5 763 aa18.28■□□□□ 0.52
VCX3A-201ENST00000381089 TEX2Q8IWB9 1127 aa18.28■□□□□ 0.52
VCX3A-201ENST00000381089 CMTR1Q8N1G2 835 aaKnown RBP18.28■□□□□ 0.52
VCX3A-201ENST00000381089 NME8Q8N427 588 aa18.28■□□□□ 0.52
VCX3A-201ENST00000381089 KCNH7Q9NS40 1196 aa18.28■□□□□ 0.52
VCX3A-201ENST00000381089 MUTYHQ9UIF7 546 aa18.28■□□□□ 0.52
VCX3A-201ENST00000381089 PADI3Q9ULW8 664 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms