RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 KCNH3Q9ULD8 1083 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 MMEP08473 750 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 PYGBP11216 843 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 S100A1P23297 94 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 ICA1Q05084 483 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 PNOCQ13519 176 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 USPL1Q5W0Q7 1092 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 ZFYVE19Q96K21 471 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 TOP2BQ02880 1626 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 MAGEA13PA6NCF6 341 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 GOLGA8RI6L899 631 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 INO80B-WBP1J3KQ70 363 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 BTDP43251 543 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 PTPN21Q16825 1174 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 PPM1KQ8N3J5 372 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 PSPC1Q8WXF1 523 aaKnown RBP11.59□□□□□ -0.55
CLCN4-202ENST00000380833 DNAJC9Q8WXX5 260 aa11.59□□□□□ -0.55
CLCN4-202ENST00000380833 ELAC2Q9BQ52 826 aaKnown RBP11.59□□□□□ -0.55
CLCN4-202ENST00000380833 INO80BQ9C086 356 aaPredicted RBP11.59□□□□□ -0.55
CLCN4-202ENST00000380833 TLR3O15455 904 aaKnown RBP11.58□□□□□ -0.56
CLCN4-202ENST00000380833 GUCY1A3Q02108 690 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 FAM49AQ9H0Q0 323 aaPredicted RBP11.58□□□□□ -0.56
CLCN4-202ENST00000380833 ATP6V0A4Q9HBG4 840 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 SLC27A2O14975 620 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 MAP4P27816 1152 aaKnown RBP11.58□□□□□ -0.56
CLCN4-202ENST00000380833 GUCY2DQ02846 1103 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 KCTD2Q14681 263 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 MMEL1Q495T6 779 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 SUCLG2Q96I99 432 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 ANKRD27Q96NW4 1050 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 USP17L12C9JPN9 530 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 USP17L21D6R901 530 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 EYA2O00167 538 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 SCG2P13521 617 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 ADCK1Q86TW2 530 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 RUNDC3BQ96NL0 473 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 PCIF1Q9H4Z3 704 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 NVLO15381 856 aaKnown RBP11.58□□□□□ -0.56
CLCN4-202ENST00000380833 CCNYQ8ND76 341 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 GABPB2Q8TAK5 448 aaPredicted RBP11.58□□□□□ -0.56
CLCN4-202ENST00000380833 DACH2Q96NX9 599 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 GUCY1B2O75343 617 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 POLR2MP0CAP2 368 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 BCRP11274 1271 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 NDUFA5Q16718 116 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 CCSER2Q9H7U1 834 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 PSTPIP2Q9H939 334 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 SLC40A1Q9NP59 571 aa11.58□□□□□ -0.56
CLCN4-202ENST00000380833 SFI1A8K8P3 1242 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 GADD45BO75293 160 aaPredicted RBP11.57□□□□□ -0.56
CLCN4-202ENST00000380833 MAGEA1P43355 309 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 ANKRD7Q92527 254 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 DPH5Q9H2P9 285 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 EURLQ9NYK6 297 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 TUBA4AP68366 448 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 RGS9BPQ6ZS82 235 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 PEX26Q7Z412 305 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 TYW1Q9NV66 732 aaKnown RBP11.57□□□□□ -0.56
CLCN4-202ENST00000380833 POLR3EQ9NVU0 708 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 RAB20Q9NX57 234 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 TYW5A2RUC4 315 aaKnown RBP11.57□□□□□ -0.56
CLCN4-202ENST00000380833 H7C0C1 242 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 ATP5OP48047 213 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 ANKRD44Q8N8A2 993 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 CATSPER1Q8NEC5 780 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 PLBD2Q8NHP8 589 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 UBE2OQ9C0C9 1292 aaKnown RBP11.57□□□□□ -0.56
CLCN4-202ENST00000380833 BAG5Q9UL15 447 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 NFX1Q12986 1120 aaKnown RBP11.57□□□□□ -0.56
CLCN4-202ENST00000380833 MED21Q13503 144 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 SPATA21Q7Z572 469 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 STX12Q86Y82 276 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 SLC7A5P2Q9GIP4 190 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 SLC38A10Q9HBR0 1119 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 TRPC7Q9HCX4 862 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 ATAD3BQ5T9A4 648 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 WDR60Q8WVS4 1066 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 HESX1Q9UBX0 185 aa11.57□□□□□ -0.56
CLCN4-202ENST00000380833 RIMS2Q9UQ26 1411 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 SEC24BO95487 1268 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 DAB2IPQ5VWQ8 1189 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 RCSD1Q6JBY9 416 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 PDCD6IPQ8WUM4 868 aaKnown RBP11.56□□□□□ -0.56
CLCN4-202ENST00000380833 HAUS4Q9H6D7 363 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 MBD2Q9UBB5 411 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 SUGT1Q9Y2Z0 365 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 GTPBP10A4D1E9 387 aaKnown RBP11.56□□□□□ -0.56
CLCN4-202ENST00000380833 RSPH10B2B2RC85 870 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 GOLGA8SH3BPF8 625 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 JAK2O60674 1132 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 RSPH10BP0C881 870 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 EIF3BP55884 814 aaKnown RBP11.56□□□□□ -0.56
CLCN4-202ENST00000380833 ANO1Q5XXA6 986 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 PLA2G4DQ86XP0 818 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 CSRNP1Q96S65 589 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 DESI2Q9BSY9 194 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 RABL2BQ9UNT1 228 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 KRIT1O00522 736 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 AHCYL1O43865 530 aa11.56□□□□□ -0.56
CLCN4-202ENST00000380833 ATP6V1E1P36543 226 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms