RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 AGO3Q9H9G7 860 aaKnown RBP20.09■□□□□ 0.81
HMGN1-203ENST00000380748 KLRF2D3W0D1 207 aa20.08■□□□□ 0.81
HMGN1-203ENST00000380748 GCOM1H8Y6P7 765 aaPredicted RBP20.08■□□□□ 0.81
HMGN1-203ENST00000380748 ZNF213O14771 459 aa20.08■□□□□ 0.81
HMGN1-203ENST00000380748 POLR2MP0CAP2 368 aa20.08■□□□□ 0.81
HMGN1-203ENST00000380748 TAF2Q6P1X5 1199 aa20.08■□□□□ 0.81
HMGN1-203ENST00000380748 TSHZ1Q6ZSZ6 1077 aa20.08■□□□□ 0.81
HMGN1-203ENST00000380748 CRIPAKQ8N1N5 446 aa20.08■□□□□ 0.81
HMGN1-203ENST00000380748 VN1R2Q8NFZ6 395 aa20.08■□□□□ 0.81
HMGN1-203ENST00000380748 SUSD6Q92537 303 aa20.08■□□□□ 0.81
HMGN1-203ENST00000380748 RTEL1Q9NZ71 1219 aa20.08■□□□□ 0.81
HMGN1-203ENST00000380748 CDY2AQ9Y6F7 541 aa20.08■□□□□ 0.81
HMGN1-203ENST00000380748 WDR87Q6ZQQ6 2873 aa20.07■□□□□ 0.8
HMGN1-203ENST00000380748 PROB1E7EW31 1015 aa20.07■□□□□ 0.8
HMGN1-203ENST00000380748 PER2O15055 1255 aa20.07■□□□□ 0.8
HMGN1-203ENST00000380748 ATF7P17544 494 aaPredicted RBP20.07■□□□□ 0.8
HMGN1-203ENST00000380748 CD52P31358 61 aa20.07■□□□□ 0.8
HMGN1-203ENST00000380748 GATMP50440 423 aa20.07■□□□□ 0.8
HMGN1-203ENST00000380748 SLC35G1Q2M3R5 365 aa20.07■□□□□ 0.8
HMGN1-203ENST00000380748 RTN4RL1Q86UN2 441 aaPredicted RBP20.07■□□□□ 0.8
HMGN1-203ENST00000380748 HOMER1Q86YM7 354 aa20.07■□□□□ 0.8
HMGN1-203ENST00000380748 DNAJB3Q8WWF6 145 aa20.07■□□□□ 0.8
HMGN1-203ENST00000380748 TLE6Q9H808 572 aa20.07■□□□□ 0.8
HMGN1-203ENST00000380748 ZSWIM5Q9P217 1185 aa20.07■□□□□ 0.8
HMGN1-203ENST00000380748 FRMPD4Q14CM0 1322 aa20.06■□□□□ 0.8
HMGN1-203ENST00000380748 FIBPO43427 364 aa20.06■□□□□ 0.8
HMGN1-203ENST00000380748 PPFIA3O75145 1194 aa20.06■□□□□ 0.8
HMGN1-203ENST00000380748 PDE1AP54750 535 aa20.06■□□□□ 0.8
HMGN1-203ENST00000380748 PPFIA1Q13136 1202 aa20.06■□□□□ 0.8
HMGN1-203ENST00000380748 RSPH3Q86UC2 560 aa20.06■□□□□ 0.8
HMGN1-203ENST00000380748 NPAS4Q8IUM7 802 aa20.06■□□□□ 0.8
HMGN1-203ENST00000380748 MAD2L2Q9UI95 211 aa20.06■□□□□ 0.8
HMGN1-203ENST00000380748 TUBE1Q9UJT0 475 aa20.06■□□□□ 0.8
HMGN1-203ENST00000380748 GALR2O43603 387 aaPredicted RBP20.05■□□□□ 0.8
HMGN1-203ENST00000380748 MARK3P27448 753 aa20.05■□□□□ 0.8
HMGN1-203ENST00000380748 NT5C2P49902 561 aa20.05■□□□□ 0.8
HMGN1-203ENST00000380748 ATP8B4Q8TF62 1192 aa20.05■□□□□ 0.8
HMGN1-203ENST00000380748 ZBTB10Q96DT7 871 aa20.05■□□□□ 0.8
HMGN1-203ENST00000380748 BAZ2BQ9UIF8 2168 aaKnown RBP20.05■□□□□ 0.8
HMGN1-203ENST00000380748 GVINP1Q7Z2Y8 2422 aa20.05■□□□□ 0.8
HMGN1-203ENST00000380748 PRR23AA6NEV1 266 aa20.04■□□□□ 0.8
HMGN1-203ENST00000380748 STAM2O75886 525 aa20.04■□□□□ 0.8
HMGN1-203ENST00000380748 SP100P23497 879 aaPredicted RBP20.04■□□□□ 0.8
HMGN1-203ENST00000380748 GRIK4Q16099 956 aa20.04■□□□□ 0.8
HMGN1-203ENST00000380748 MARCH8Q5T0T0 291 aa20.04■□□□□ 0.8
HMGN1-203ENST00000380748 ANKRD45Q5TZF3 282 aa20.04■□□□□ 0.8
HMGN1-203ENST00000380748 ZBTB33Q86T24 672 aa20.04■□□□□ 0.8
HMGN1-203ENST00000380748 MICAL1Q8TDZ2 1067 aa20.04■□□□□ 0.8
HMGN1-203ENST00000380748 RIPOR3Q96MK2 946 aa20.04■□□□□ 0.8
HMGN1-203ENST00000380748 PIGSQ96S52 555 aa20.04■□□□□ 0.8
HMGN1-203ENST00000380748 MBLAC1A4D2B0 266 aaPredicted RBP20.03■□□□□ 0.8
HMGN1-203ENST00000380748 TCF7P36402 384 aaPredicted RBP20.03■□□□□ 0.8
HMGN1-203ENST00000380748 MRPS6P82932 125 aaKnown RBP20.03■□□□□ 0.8
HMGN1-203ENST00000380748 DUSP6Q16828 381 aa20.03■□□□□ 0.8
HMGN1-203ENST00000380748 IFIT1BQ5T764 474 aaKnown RBP20.03■□□□□ 0.8
HMGN1-203ENST00000380748 UBAC1Q9BSL1 405 aa20.03■□□□□ 0.8
HMGN1-203ENST00000380748 PALM3A6NDB9 673 aaPredicted RBP20.02■□□□□ 0.8
HMGN1-203ENST00000380748 STAG3L1P0CL83 205 aa20.02■□□□□ 0.8
HMGN1-203ENST00000380748 SCG2P13521 617 aa20.02■□□□□ 0.8
HMGN1-203ENST00000380748 IBSPP21815 317 aaPredicted RBP20.02■□□□□ 0.8
HMGN1-203ENST00000380748 NUBP1P53384 320 aa20.02■□□□□ 0.8
HMGN1-203ENST00000380748 TICAM2Q86XR7 235 aa20.02■□□□□ 0.8
HMGN1-203ENST00000380748 NEK1Q96PY6 1258 aa20.02■□□□□ 0.8
HMGN1-203ENST00000380748 SENP7Q9BQF6 1050 aa20.02■□□□□ 0.8
HMGN1-203ENST00000380748 APOL5Q9BWW9 433 aa20.02■□□□□ 0.8
HMGN1-203ENST00000380748 FTHL17Q9BXU8 183 aa20.02■□□□□ 0.8
HMGN1-203ENST00000380748 FAM49AQ9H0Q0 323 aaPredicted RBP20.02■□□□□ 0.8
HMGN1-203ENST00000380748 ZBTB47Q9UFB7 747 aaPredicted RBP20.02■□□□□ 0.8
HMGN1-203ENST00000380748 TRPC6Q9Y210 931 aa20.02■□□□□ 0.8
HMGN1-203ENST00000380748 NBL1P41271 181 aa20.01■□□□□ 0.79
HMGN1-203ENST00000380748 MFAP1P55081 439 aaKnown RBP20.01■□□□□ 0.79
HMGN1-203ENST00000380748 ERVFC1P60507 584 aa20.01■□□□□ 0.79
HMGN1-203ENST00000380748 IGBP1P78318 339 aa20.01■□□□□ 0.79
HMGN1-203ENST00000380748 TMEM105Q8N8V8 129 aa20.01■□□□□ 0.79
HMGN1-203ENST00000380748 RILPL2Q969X0 211 aa20.01■□□□□ 0.79
HMGN1-203ENST00000380748 S1PR5Q9H228 398 aa20.01■□□□□ 0.79
HMGN1-203ENST00000380748 PADI3Q9ULW8 664 aa20.01■□□□□ 0.79
HMGN1-203ENST00000380748 LOXHD1Q8IVV2 1947 aa20.01■□□□□ 0.79
HMGN1-203ENST00000380748 TMEM62Q0P6H9 643 aa20■□□□□ 0.79
HMGN1-203ENST00000380748 SEC23AQ15436 765 aa20■□□□□ 0.79
HMGN1-203ENST00000380748 KREMEN2Q8NCW0 462 aa20■□□□□ 0.79
HMGN1-203ENST00000380748 CDCA3Q99618 268 aaPredicted RBP20■□□□□ 0.79
HMGN1-203ENST00000380748 RIOX1Q9H6W3 641 aa20■□□□□ 0.79
HMGN1-203ENST00000380748 HCSTQ9UBK5 93 aa20■□□□□ 0.79
HMGN1-203ENST00000380748 GSTTP1A0A1W2PQM5 241 aa19.99■□□□□ 0.79
HMGN1-203ENST00000380748 CYTH3O43739 400 aa19.99■□□□□ 0.79
HMGN1-203ENST00000380748 TECP42680 631 aa19.99■□□□□ 0.79
HMGN1-203ENST00000380748 UBE3AQ05086 875 aa19.99■□□□□ 0.79
HMGN1-203ENST00000380748 TRAF1Q13077 416 aa19.99■□□□□ 0.79
HMGN1-203ENST00000380748 SPOUT1Q5T280 376 aaKnown RBP19.99■□□□□ 0.79
HMGN1-203ENST00000380748 ANKRD54Q6NXT1 300 aa19.99■□□□□ 0.79
HMGN1-203ENST00000380748 SYCE2Q6PIF2 218 aa19.99■□□□□ 0.79
HMGN1-203ENST00000380748 ERMP1Q7Z2K6 904 aa19.99■□□□□ 0.79
HMGN1-203ENST00000380748 KRT23Q9C075 422 aa19.99■□□□□ 0.79
HMGN1-203ENST00000380748 TMX1Q9H3N1 280 aa19.99■□□□□ 0.79
HMGN1-203ENST00000380748 ERAP1Q9NZ08 941 aa19.99■□□□□ 0.79
HMGN1-203ENST00000380748 CDH22Q9UJ99 828 aa19.99■□□□□ 0.79
HMGN1-203ENST00000380748 LRFN2Q9ULH4 789 aa19.99■□□□□ 0.79
HMGN1-203ENST00000380748 PCDHB12Q9Y5F1 795 aa19.99■□□□□ 0.79
HMGN1-203ENST00000380748 TRPV2Q9Y5S1 764 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms