RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 C7orf25Q9BPX7 421 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 CD2APQ9Y5K6 639 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 LMO7Q8WWI1 1683 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 ABCC6O95255 1503 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 RAD51CO43502 376 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 VPS41P49754 854 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 SKIV2LQ15477 1246 aaKnown RBP12.4□□□□□ -0.42
SMAD9-202ENST00000379826 BRDTQ58F21 947 aaPredicted RBP12.4□□□□□ -0.42
SMAD9-202ENST00000379826 TTI2Q6NXR4 508 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 MMGT1Q8N4V1 131 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 PBKQ96KB5 322 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 SEMA6BQ9H3T3 888 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 RNF14Q9UBS8 474 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 PDE2AO00408 941 aaPredicted RBP12.4□□□□□ -0.43
SMAD9-202ENST00000379826 CALRP27797 417 aaKnown RBP12.4□□□□□ -0.43
SMAD9-202ENST00000379826 RIOK1Q9BRS2 568 aaKnown RBP12.4□□□□□ -0.43
SMAD9-202ENST00000379826 FER1L4A9Z1Z3 1794 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 SLIT3O75094 1523 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 CFBP00751 764 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 POTEJP0CG39 1038 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 KCNH2Q12809 1159 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 PSMD2Q13200 908 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 ALKBH5Q6P6C2 394 aaKnown RBP12.39□□□□□ -0.43
SMAD9-202ENST00000379826 CCSER1Q9C0I3 900 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 REXO2Q9Y3B8 237 aaKnown RBP12.39□□□□□ -0.43
SMAD9-202ENST00000379826 PCDHA1Q9Y5I3 950 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 ARHGAP23Q9P227 1491 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 ZSCAN5CA6NGD5 496 aaPredicted RBP12.39□□□□□ -0.43
SMAD9-202ENST00000379826 CTNNA2P26232 953 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 ECE1P42892 770 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 ZNF211Q13398 564 aaPredicted RBP12.39□□□□□ -0.43
SMAD9-202ENST00000379826 SLC27A3Q5K4L6 730 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 TCP11Q8WWU5 503 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 MED15Q96RN5 788 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 FBXL5Q9UKA1 691 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 NOC2LQ9Y3T9 749 aaKnown RBP12.39□□□□□ -0.43
SMAD9-202ENST00000379826 TMOD1P28289 359 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 HDLBPQ00341 1268 aaKnown RBP12.39□□□□□ -0.43
SMAD9-202ENST00000379826 TNFAIP1Q13829 316 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 CLEC10AQ8IUN9 316 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 CASKIN2Q8WXE0 1202 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 EPN3Q9H201 632 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 MESDQ14696 234 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 TAOK1Q7L7X3 1001 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 SPC25Q9HBM1 224 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 MRC1P22897 1456 aa12.39□□□□□ -0.43
SMAD9-202ENST00000379826 USP17L15C9J2P7 530 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 USP17L13C9JLJ4 530 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 USP17L11C9JVI0 530 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 USP17L18D6R9N7 530 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 USP17L22D6RA61 530 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 USP17L17D6RBQ6 530 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 USP17L19D6RCP7 530 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 USP17L20D6RJB6 530 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 PBX1P40424 430 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 USP17L24Q0WX57 530 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 SNX1Q13596 522 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 USP17L6PQ6QN14 398 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 CCDC197Q8NCU1 140 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 PACSIN1Q9BY11 444 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 TAF1DQ9H5J8 278 aaPredicted RBP12.38□□□□□ -0.43
SMAD9-202ENST00000379826 SLC5A4Q9NY91 659 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 AMACRQ9UHK6 382 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 PLEKHG2Q9H7P9 1386 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 NEBLO76041 1014 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 DR1Q01658 176 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 PHLDB2Q86SQ0 1253 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 FAM114A2Q9NRY5 505 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 ARHGAP20Q9P2F6 1191 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 A0A1W2PQJ5 194 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 CAMTA2O94983 1202 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 CETN2P41208 172 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 C12orf60Q5U649 245 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 SLFN12Q8IYM2 578 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 N4BP2L2Q92802 583 aaPredicted RBP12.38□□□□□ -0.43
SMAD9-202ENST00000379826 POTEFA5A3E0 1075 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 TULP2O00295 520 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 DAPK3O43293 454 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 NTSR2O95665 410 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 MDH1P40925 334 aaKnown RBP12.38□□□□□ -0.43
SMAD9-202ENST00000379826 DOK7Q18PE1 504 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 WDR59Q6PJI9 974 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 POTEGQ6S5H5 508 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 POTEEQ6S8J3 1075 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 DNAJC17Q9NVM6 304 aaKnown RBP12.38□□□□□ -0.43
SMAD9-202ENST00000379826 USTQ9Y2C2 406 aa12.38□□□□□ -0.43
SMAD9-202ENST00000379826 LSP1P33241 339 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 CUL1Q13616 776 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 CAPN12Q6ZSI9 719 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 SFR1Q86XK3 245 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 GDAP1Q8TB36 358 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 PLVAPQ9BX97 442 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 PCIF1Q9H4Z3 704 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 INTS9Q9NV88 658 aaKnown RBP12.37□□□□□ -0.43
SMAD9-202ENST00000379826 NKIRAS1Q9NYS0 192 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 DAAM1Q9Y4D1 1078 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 HNRNPH1P31943 449 aaKnown RBP12.37□□□□□ -0.43
SMAD9-202ENST00000379826 ATP11AP98196 1134 aa12.37□□□□□ -0.43
SMAD9-202ENST00000379826 TRIP13Q15645 432 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms