RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 GEMIN4P57678 1058 aaKnown RBP9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 GPSM2P81274 684 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 NSUN2Q08J23 767 aaKnown RBP eCLIP9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 KCNJ12Q14500 433 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 KCTD21Q4G0X4 260 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 SOGA3Q5TF21 947 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 TBC1D9BQ66K14 1250 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 INTS8Q75QN2 995 aaKnown RBP9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 KRT27Q7Z3Y8 459 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 VPS37DQ86XT2 251 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 GATA6Q92908 595 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 AIFM3Q96NN9 605 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 OLFM3Q96PB7 478 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 RXFP1Q9HBX9 757 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 TXLNGQ9NUQ3 528 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 ARL2BPQ9Y2Y0 163 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 WDR17Q8IZU2 1322 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 NUTM2BA6NNL0 878 aaPredicted RBP9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 NUTM2EB1AL46 878 aaPredicted RBP9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 MAP3K7O43318 606 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 PDGFRBP09619 1106 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 SCG2P13521 617 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 RASA1P20936 1047 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 HOXA10P31260 410 aaPredicted RBP9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 FLT3P36888 993 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 ERVK-9P63128 1117 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 TNNC1P63316 161 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 ZNF449Q6P9G9 518 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 ST13P4Q8IZP2 240 aaPredicted RBP9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 NME8Q8N427 588 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 RBM46Q8TBY0 533 aaKnown RBP9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 HSPBAP1Q96EW2 488 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 LTV1Q96GA3 475 aaPredicted RBP9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 CEP295NLQ96MC4 621 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 TUBGCP5Q96RT8 1024 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 THAP9Q9H5L6 903 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 DCLRE1BQ9H816 532 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 DDX25Q9UHL0 483 aaKnown RBP9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 HAO1Q9UJM8 370 aa9.22□□□□□ -0.93
NHLRC3-201ENST00000379599 SPDYE16A6NNV3 312 aaPredicted RBP9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 RGL2O15211 777 aa9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 PORP16435 677 aaPredicted RBP9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 SPAG1Q07617 926 aa9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 PTPAQ15257 358 aa9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 PUS10Q3MIT2 529 aaKnown RBP9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 CERKLQ49MI3 558 aaPredicted RBP9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 TMEM259Q4ZIN3 620 aa9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 TMEM214Q6NUQ4 689 aaKnown RBP9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 PACS1Q6VY07 963 aa9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 TREML1Q86YW5 311 aa9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 SIX5Q8N196 739 aa9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 ZNF713Q8N859 430 aaPredicted RBP9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 FBXO41Q8TF61 875 aa9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 ATXN2LQ8WWM7 1075 aaKnown RBP9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 ARHGEF2Q92974 986 aaKnown RBP9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 EURLQ9NYK6 297 aa9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 KLHL14Q9P2G3 628 aa9.21□□□□□ -0.93
NHLRC3-201ENST00000379599 MYH7P12883 1935 aa9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 GOLGA8BA8MQT2 603 aa9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 UNC5CO95185 931 aa9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 TARSP26639 723 aaKnown RBP9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 EPHB2P29323 1055 aa9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 GRIN1Q05586 938 aa9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 FOXD4Q12950 439 aaPredicted RBP9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 RRAGBQ5VZM2 374 aa9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 MARK2Q7KZI7 788 aaKnown RBP9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 AGGF1Q8N302 714 aaeCLIP9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 STAMQ92783 540 aa9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 SMC6Q96SB8 1091 aa9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 SH3GL1Q99961 368 aa9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 TUT1Q9H6E5 874 aaKnown RBP9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 MLXIPLQ9NP71 852 aa9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 AGPAT5Q9NUQ2 364 aa9.21□□□□□ -0.94
NHLRC3-201ENST00000379599 USP42Q9H9J4 1324 aaKnown RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 POTEFA5A3E0 1075 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 SEMA3EO15041 775 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 RGS16O15492 202 aaPredicted RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 ADCY3O60266 1144 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 AFPP02771 609 aaKnown RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 KRT72Q14CN4 511 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 CCDC152Q4G0S7 254 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 VWA3BQ502W6 1294 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 HDGFL2Q7Z4V5 671 aaPredicted RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 LRRC43Q8N309 656 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 ENDOVQ8N8Q3 282 aaKnown RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 PRPF31Q8WWY3 499 aaKnown RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 ZNF274Q96GC6 653 aaPredicted RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 DNAJC7Q99615 494 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 ISCUQ9H1K1 167 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 DENND2DQ9H6A0 471 aaPredicted RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 LIMA1Q9UHB6 759 aaKnown RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 POGZQ7Z3K3 1410 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 PASKQ96RG2 1323 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 MYH13Q9UKX3 1938 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 LCA5LO95447 670 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 POTEIP0CG38 1075 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 CDK7P50613 346 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 ARFIP2P53365 341 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 DCTN2Q13561 401 aaKnown RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 KIF22Q14807 665 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms